RNA–Protein interactions for RNA: ENST00000595081.5

PNKP-205, Transcript of polynucleotide kinase 3'-phosphatase, human

TSL 2

Gene PNKP, Length 513 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PNKP-205	ENST00000595081	UROD	P06132	367 aa		24.74	■■□□□ 1.55
PNKP-205	ENST00000595081	TNNI1	P19237	187 aa		24.74	■■□□□ 1.55
PNKP-205	ENST00000595081	GTF2F1	P35269	517 aa	Known RBP eCLIP	24.74	■■□□□ 1.55
PNKP-205	ENST00000595081	GLUD2	P49448	558 aa		24.74	■■□□□ 1.55
PNKP-205	ENST00000595081	PAK1	Q13153	545 aa		24.74	■■□□□ 1.55
PNKP-205	ENST00000595081	USP41	Q3LFD5	358 aa		24.74	■■□□□ 1.55
PNKP-205	ENST00000595081	RTP2	Q5QGT7	225 aa		24.74	■■□□□ 1.55
PNKP-205	ENST00000595081	CCDC183	Q5T5S1	534 aa		24.74	■■□□□ 1.55
PNKP-205	ENST00000595081	KIAA1841	Q6NSI8	718 aa		24.74	■■□□□ 1.55
PNKP-205	ENST00000595081	TTI2	Q6NXR4	508 aa		24.74	■■□□□ 1.55
PNKP-205	ENST00000595081	RBM43	Q6ZSC3	357 aa	Known RBP	24.74	■■□□□ 1.55
PNKP-205	ENST00000595081	CEP57	Q86XR8	500 aa		24.74	■■□□□ 1.55
PNKP-205	ENST00000595081	FAM186B	Q8IYM0	893 aa		24.74	■■□□□ 1.55
PNKP-205	ENST00000595081	PARD3B	Q8TEW8	1205 aa		24.74	■■□□□ 1.55
PNKP-205	ENST00000595081	ANKRD36BP1	Q96IX9	119 aa		24.74	■■□□□ 1.55
PNKP-205	ENST00000595081	TMEM63C	Q9P1W3	806 aa		24.74	■■□□□ 1.55
PNKP-205	ENST00000595081	LRRIQ3	A6PVS8	624 aa	Predicted RBP	24.73	■■□□□ 1.55
PNKP-205	ENST00000595081	PIR	O00625	290 aa		24.73	■■□□□ 1.55
PNKP-205	ENST00000595081	ITGB3	P05106	788 aa		24.73	■■□□□ 1.55
PNKP-205	ENST00000595081	POLR2B	P30876	1174 aa	Known RBP	24.73	■■□□□ 1.55
PNKP-205	ENST00000595081	PSMC2	P35998	433 aa	Known RBP	24.73	■■□□□ 1.55
PNKP-205	ENST00000595081	NRIP1	P48552	1158 aa		24.73	■■□□□ 1.55
PNKP-205	ENST00000595081	DLG4	P78352	724 aa		24.73	■■□□□ 1.55
PNKP-205	ENST00000595081	FKBP3	Q00688	224 aa	Known RBP	24.73	■■□□□ 1.55
PNKP-205	ENST00000595081	DSG1	Q02413	1049 aa		24.73	■■□□□ 1.55
PNKP-205	ENST00000595081	HYAL1	Q12794	435 aa		24.73	■■□□□ 1.55
PNKP-205	ENST00000595081	ELAVL2	Q12926	359 aa	Known RBP	24.73	■■□□□ 1.55
PNKP-205	ENST00000595081	BMS1	Q14692	1282 aa	Known RBP	24.73	■■□□□ 1.55
PNKP-205	ENST00000595081	DUOXA2	Q1HG44	320 aa		24.73	■■□□□ 1.55
PNKP-205	ENST00000595081	DPCR1	Q3MIW9	517 aa		24.73	■■□□□ 1.55
PNKP-205	ENST00000595081	KIAA0319	Q5VV43	1072 aa		24.73	■■□□□ 1.55
PNKP-205	ENST00000595081	ZC3H3	Q8IXZ2	948 aa	Known RBP	24.73	■■□□□ 1.55
PNKP-205	ENST00000595081	RIN2	Q8WYP3	895 aa	Predicted RBP	24.73	■■□□□ 1.55
PNKP-205	ENST00000595081	ZNF516	Q92618	1163 aa		24.73	■■□□□ 1.55
PNKP-205	ENST00000595081	DUSP9	Q99956	384 aa	Known RBP	24.73	■■□□□ 1.55
PNKP-205	ENST00000595081	TLE6	Q9H808	572 aa		24.73	■■□□□ 1.55
PNKP-205	ENST00000595081	MRPL17	Q9NRX2	175 aa	Known RBP	24.73	■■□□□ 1.55
PNKP-205	ENST00000595081	MAPK13	O15264	365 aa		24.72	■■□□□ 1.55
PNKP-205	ENST00000595081	SPTLC1	O15269	473 aa		24.72	■■□□□ 1.55
PNKP-205	ENST00000595081	TRAPPC3	O43617	180 aa		24.72	■■□□□ 1.55
PNKP-205	ENST00000595081	LILRB3	O75022	631 aa		24.72	■■□□□ 1.55
PNKP-205	ENST00000595081	TNNC2	P02585	160 aa		24.72	■■□□□ 1.55
PNKP-205	ENST00000595081	TKT	P29401	623 aa	Known RBP	24.72	■■□□□ 1.55
PNKP-205	ENST00000595081	NLRP12	P59046	1061 aa		24.72	■■□□□ 1.55
PNKP-205	ENST00000595081	SKIV2L	Q15477	1246 aa	Known RBP	24.72	■■□□□ 1.55
PNKP-205	ENST00000595081	PRSS55	Q6UWB4	352 aa	Predicted RBP	24.72	■■□□□ 1.55
PNKP-205	ENST00000595081	CSGALNACT2	Q8N6G5	542 aa		24.72	■■□□□ 1.55
PNKP-205	ENST00000595081	MLKL	Q8NB16	471 aa		24.72	■■□□□ 1.55
PNKP-205	ENST00000595081	CXorf38	Q8TB03	319 aa		24.72	■■□□□ 1.55
PNKP-205	ENST00000595081	SUSD3	Q96L08	255 aa		24.72	■■□□□ 1.55
PNKP-205	ENST00000595081	TTPAL	Q9BTX7	342 aa		24.72	■■□□□ 1.55
PNKP-205	ENST00000595081	IGFLR1	Q9H665	355 aa		24.72	■■□□□ 1.55
PNKP-205	ENST00000595081	SIX4	Q9UIU6	781 aa		24.72	■■□□□ 1.55
PNKP-205	ENST00000595081	ITGA11	Q9UKX5	1188 aa		24.72	■■□□□ 1.55
PNKP-205	ENST00000595081	AGAP1	Q9UPQ3	857 aa		24.72	■■□□□ 1.55
PNKP-205	ENST00000595081	IRAK3	Q9Y616	596 aa		24.72	■■□□□ 1.55
PNKP-205	ENST00000595081	BICDL2	A1A5D9	508 aa		24.71	■■□□□ 1.55
PNKP-205	ENST00000595081	KRT19	P08727	400 aa		24.71	■■□□□ 1.55
PNKP-205	ENST00000595081	FGFR3	P22607	806 aa		24.71	■■□□□ 1.55
PNKP-205	ENST00000595081	LILRA4	P59901	499 aa		24.71	■■□□□ 1.55
PNKP-205	ENST00000595081	CAVIN1	Q6NZI2	390 aa	Known RBP	24.71	■■□□□ 1.55
PNKP-205	ENST00000595081	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	24.71	■■□□□ 1.55
PNKP-205	ENST00000595081	TRAPPC11	Q7Z392	1133 aa		24.71	■■□□□ 1.55
PNKP-205	ENST00000595081	TMC2	Q8TDI7	906 aa		24.71	■■□□□ 1.55
PNKP-205	ENST00000595081	PPP2R3C	Q969Q6	453 aa		24.71	■■□□□ 1.55
PNKP-205	ENST00000595081	CNP	P09543	421 aa	Known RBP	24.7	■■□□□ 1.54
PNKP-205	ENST00000595081	TRIM49	P0CI25	452 aa		24.7	■■□□□ 1.54
PNKP-205	ENST00000595081	TRIM49C	P0CI26	452 aa		24.7	■■□□□ 1.54
PNKP-205	ENST00000595081	EPB41	P11171	864 aa	Known RBP	24.7	■■□□□ 1.54
PNKP-205	ENST00000595081	AARS	P49588	968 aa	Known RBP eCLIP	24.7	■■□□□ 1.54
PNKP-205	ENST00000595081	VAMP7	P51809	220 aa		24.7	■■□□□ 1.54
PNKP-205	ENST00000595081	DUSP6	Q16828	381 aa		24.7	■■□□□ 1.54
PNKP-205	ENST00000595081	C1orf220	Q5T0J3	134 aa		24.7	■■□□□ 1.54
PNKP-205	ENST00000595081	INTS8	Q75QN2	995 aa	Known RBP	24.7	■■□□□ 1.54
PNKP-205	ENST00000595081	MKNK1	Q9BUB5	465 aa		24.7	■■□□□ 1.54
PNKP-205	ENST00000595081	VWA8	A3KMH1	1905 aa		24.69	■■□□□ 1.54
PNKP-205	ENST00000595081	KRT13	P13646	458 aa		24.69	■■□□□ 1.54
PNKP-205	ENST00000595081	RPL17	P18621	184 aa	Known RBP	24.69	■■□□□ 1.54
PNKP-205	ENST00000595081	TAF6	P49848	677 aa		24.69	■■□□□ 1.54
PNKP-205	ENST00000595081	CLDN10	P78369	228 aa		24.69	■■□□□ 1.54
PNKP-205	ENST00000595081	RBP5	P82980	135 aa		24.69	■■□□□ 1.54
PNKP-205	ENST00000595081	DSTYK	Q6XUX3	929 aa		24.69	■■□□□ 1.54
PNKP-205	ENST00000595081	PIK3R5	Q8WYR1	880 aa		24.69	■■□□□ 1.54
PNKP-205	ENST00000595081	BORCS6	Q96GS4	357 aa		24.69	■■□□□ 1.54
PNKP-205	ENST00000595081	MED15	Q96RN5	788 aa		24.69	■■□□□ 1.54
PNKP-205	ENST00000595081	RWDD2A	Q9UIY3	292 aa		24.69	■■□□□ 1.54
PNKP-205	ENST00000595081	SSX2IP	Q9Y2D8	614 aa		24.69	■■□□□ 1.54
PNKP-205	ENST00000595081	SCN1A	P35498	2009 aa		24.69	■■□□□ 1.54
PNKP-205	ENST00000595081	SLC16A3	O15427	465 aa	Known RBP	24.68	■■□□□ 1.54
PNKP-205	ENST00000595081	LINC01565	O15544	149 aa		24.68	■■□□□ 1.54
PNKP-205	ENST00000595081	CLASP2	O75122	1294 aa	Known RBP	24.68	■■□□□ 1.54
PNKP-205	ENST00000595081	RBM10	P98175	930 aa	Known RBP	24.68	■■□□□ 1.54
PNKP-205	ENST00000595081	BFSP1	Q12934	665 aa		24.68	■■□□□ 1.54
PNKP-205	ENST00000595081	FOXR2	Q6PJQ5	311 aa		24.68	■■□□□ 1.54
PNKP-205	ENST00000595081	LNX1	Q8TBB1	728 aa	Predicted RBP	24.68	■■□□□ 1.54
PNKP-205	ENST00000595081	SENP8	Q96LD8	212 aa		24.68	■■□□□ 1.54
PNKP-205	ENST00000595081	ZNF560	Q96MR9	790 aa		24.68	■■□□□ 1.54
PNKP-205	ENST00000595081	KLHL5	Q96PQ7	755 aa		24.68	■■□□□ 1.54
PNKP-205	ENST00000595081	PRDM6	Q9NQX0	595 aa		24.68	■■□□□ 1.54
PNKP-205	ENST00000595081	PCDHB8	Q9UN66	801 aa		24.68	■■□□□ 1.54

Retrieved 100 of 20,778 RNA–protein pairs in 29 ms