RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 ACER1Q8TDN7 264 aa14.06□□□□□ -0.16
VRK3-209ENST00000594948 TAS1R2Q8TE23 839 aa14.06□□□□□ -0.16
VRK3-209ENST00000594948 THOC1Q96FV9 657 aaKnown RBP14.06□□□□□ -0.16
VRK3-209ENST00000594948 ZNF570Q96NI8 536 aa14.06□□□□□ -0.16
VRK3-209ENST00000594948 OSBPL8Q9BZF1 889 aa14.06□□□□□ -0.16
VRK3-209ENST00000594948 TRIM6Q9C030 488 aaPredicted RBP14.06□□□□□ -0.16
VRK3-209ENST00000594948 TDRD3Q9H7E2 651 aaKnown RBP14.06□□□□□ -0.16
VRK3-209ENST00000594948 MRPL47Q9HD33 250 aaKnown RBP14.06□□□□□ -0.16
VRK3-209ENST00000594948 GGT7Q9UJ14 662 aa14.06□□□□□ -0.16
VRK3-209ENST00000594948 R3HDM2Q9Y2K5 976 aaKnown RBP14.06□□□□□ -0.16
VRK3-209ENST00000594948 ASTN2O75129 1339 aaPredicted RBP14.06□□□□□ -0.16
VRK3-209ENST00000594948 RASA4BC9J798 803 aa14.06□□□□□ -0.16
VRK3-209ENST00000594948 DDX39AO00148 427 aaKnown RBP14.06□□□□□ -0.16
VRK3-209ENST00000594948 RASA4O43374 803 aa14.06□□□□□ -0.16
VRK3-209ENST00000594948 ECE2O60344 883 aa14.06□□□□□ -0.16
VRK3-209ENST00000594948 DIAPH2O60879 1101 aa14.06□□□□□ -0.16
VRK3-209ENST00000594948 RALAP11233 206 aa14.06□□□□□ -0.16
VRK3-209ENST00000594948 GARTP22102 1010 aa14.06□□□□□ -0.16
VRK3-209ENST00000594948 CNGA1P29973 690 aa14.06□□□□□ -0.16
VRK3-209ENST00000594948 ABCD1P33897 745 aa14.06□□□□□ -0.16
VRK3-209ENST00000594948 JAK3P52333 1124 aa14.06□□□□□ -0.16
VRK3-209ENST00000594948 PSMC5P62195 406 aa14.06□□□□□ -0.16
VRK3-209ENST00000594948 GRIPAP1Q4V328 841 aa14.06□□□□□ -0.16
VRK3-209ENST00000594948 C15orf39Q6ZRI6 1047 aa14.06□□□□□ -0.16
VRK3-209ENST00000594948 SV2AQ7L0J3 742 aa14.06□□□□□ -0.16
VRK3-209ENST00000594948 BZW1Q7L1Q6 419 aaKnown RBP14.06□□□□□ -0.16
VRK3-209ENST00000594948 MON1BQ7L1V2 547 aa14.06□□□□□ -0.16
VRK3-209ENST00000594948 KIF2BQ8N4N8 673 aa14.06□□□□□ -0.16
VRK3-209ENST00000594948 FAXDC2Q96IV6 333 aa14.06□□□□□ -0.16
VRK3-209ENST00000594948 NTPCRQ9BSD7 190 aaKnown RBP14.06□□□□□ -0.16
VRK3-209ENST00000594948 MLXIPLQ9NP71 852 aa14.06□□□□□ -0.16
VRK3-209ENST00000594948 SSU72Q9NP77 194 aaKnown RBP14.06□□□□□ -0.16
VRK3-209ENST00000594948 C1orf112Q9NSG2 853 aa14.06□□□□□ -0.16
VRK3-209ENST00000594948 ZBTB21Q9ULJ3 1066 aa14.06□□□□□ -0.16
VRK3-209ENST00000594948 DNALI1O14645 258 aaPredicted RBP14.05□□□□□ -0.16
VRK3-209ENST00000594948 HNRNPCL1O60812 293 aaKnown RBP14.05□□□□□ -0.16
VRK3-209ENST00000594948 ICAM1P05362 532 aa14.05□□□□□ -0.16
VRK3-209ENST00000594948 KRT5P13647 590 aa14.05□□□□□ -0.16
VRK3-209ENST00000594948 ALDH3A1P30838 453 aa14.05□□□□□ -0.16
VRK3-209ENST00000594948 SFNP31947 248 aa14.05□□□□□ -0.16
VRK3-209ENST00000594948 NSFP46459 744 aaKnown RBP14.05□□□□□ -0.16
VRK3-209ENST00000594948 MOGSQ13724 837 aa14.05□□□□□ -0.16
VRK3-209ENST00000594948 TMED2Q15363 201 aa14.05□□□□□ -0.16
VRK3-209ENST00000594948 TRIP13Q15645 432 aaPredicted RBP14.05□□□□□ -0.16
VRK3-209ENST00000594948 PDK4Q16654 411 aa14.05□□□□□ -0.16
VRK3-209ENST00000594948 ERICH1Q86X53 443 aa14.05□□□□□ -0.16
VRK3-209ENST00000594948 MCF2L2Q86YR7 1114 aa14.05□□□□□ -0.16
VRK3-209ENST00000594948 GPD1LQ8N335 351 aa14.05□□□□□ -0.16
VRK3-209ENST00000594948 RDM1Q8NG50 284 aa14.05□□□□□ -0.16
VRK3-209ENST00000594948 ZNF398Q8TD17 642 aa14.05□□□□□ -0.16
VRK3-209ENST00000594948 PRCCQ92733 491 aaPredicted RBP14.05□□□□□ -0.16
VRK3-209ENST00000594948 CCDC127Q96BQ5 260 aa14.05□□□□□ -0.16
VRK3-209ENST00000594948 RBM15Q96T37 977 aaKnown RBP eCLIP14.05□□□□□ -0.163e-6■■■■□ 20.8
VRK3-209ENST00000594948 PHACTR1Q9C0D0 580 aa14.05□□□□□ -0.16
VRK3-209ENST00000594948 ETNK1Q9HBU6 452 aa14.05□□□□□ -0.16
VRK3-209ENST00000594948 FETUBQ9UGM5 382 aa14.05□□□□□ -0.16
VRK3-209ENST00000594948 SCINQ9Y6U3 715 aa14.05□□□□□ -0.16
VRK3-209ENST00000594948 TRAFD1O14545 582 aaPredicted RBP14.04□□□□□ -0.16
VRK3-209ENST00000594948 FDX1P10109 184 aa14.04□□□□□ -0.16
VRK3-209ENST00000594948 PTGER2P43116 358 aa14.04□□□□□ -0.16
VRK3-209ENST00000594948 RASSF2P50749 326 aa14.04□□□□□ -0.16
VRK3-209ENST00000594948 CLDN10P78369 228 aa14.04□□□□□ -0.16
VRK3-209ENST00000594948 ZC3H12AQ5D1E8 599 aaKnown RBP14.04□□□□□ -0.16
VRK3-209ENST00000594948 PHF13Q86YI8 300 aaPredicted RBP14.04□□□□□ -0.16
VRK3-209ENST00000594948 NLGN1Q8N2Q7 840 aa14.04□□□□□ -0.16
VRK3-209ENST00000594948 TEX9Q8N6V9 391 aa14.04□□□□□ -0.16
VRK3-209ENST00000594948 SAAL1Q96ER3 474 aa14.04□□□□□ -0.16
VRK3-209ENST00000594948 MYLK2Q9H1R3 596 aa14.04□□□□□ -0.16
VRK3-209ENST00000594948 KIAA1586Q9HCI6 787 aa14.04□□□□□ -0.16
VRK3-209ENST00000594948 SLC24A2Q9UI40 661 aa14.04□□□□□ -0.16
VRK3-209ENST00000594948 PHTF1Q9UMS5 762 aa14.04□□□□□ -0.16
VRK3-209ENST00000594948 DRG1Q9Y295 367 aaKnown RBP14.04□□□□□ -0.16
VRK3-209ENST00000594948 STK38LQ9Y2H1 464 aa14.04□□□□□ -0.16
VRK3-209ENST00000594948 EXOC1LA0A1B0GW35 172 aa14.04□□□□□ -0.16
VRK3-209ENST00000594948 GSTTP1A0A1W2PQM5 241 aa14.04□□□□□ -0.16
VRK3-209ENST00000594948 A8MUI8 341 aa14.04□□□□□ -0.16
VRK3-209ENST00000594948 ONECUT3O60422 494 aaPredicted RBP14.04□□□□□ -0.16
VRK3-209ENST00000594948 EDF1O60869 148 aaKnown RBP14.04□□□□□ -0.16
VRK3-209ENST00000594948 GCAP28676 217 aa14.04□□□□□ -0.16
VRK3-209ENST00000594948 NPTX2P47972 431 aa14.04□□□□□ -0.16
VRK3-209ENST00000594948 MCL1Q07820 350 aa14.04□□□□□ -0.16
VRK3-209ENST00000594948 DMP1Q13316 513 aaPredicted RBP14.04□□□□□ -0.16
VRK3-209ENST00000594948 ANKRD20A2Q5SQ80 823 aa14.04□□□□□ -0.16
VRK3-209ENST00000594948 WASHC2DQ5SRD0 308 aa14.04□□□□□ -0.16
VRK3-209ENST00000594948 ANKRD20A1Q5TYW2 823 aa14.04□□□□□ -0.16
VRK3-209ENST00000594948 ANKRD20A3Q5VUR7 823 aa14.04□□□□□ -0.16
VRK3-209ENST00000594948 PLEKHA7Q6IQ23 1121 aa14.04□□□□□ -0.16
VRK3-209ENST00000594948 VSIG1Q86XK7 387 aa14.04□□□□□ -0.16
VRK3-209ENST00000594948 UTP4Q969X6 686 aaKnown RBP14.04□□□□□ -0.16
VRK3-209ENST00000594948 RBM41Q96IZ5 413 aaKnown RBP14.04□□□□□ -0.16
VRK3-209ENST00000594948 C9orf72Q96LT7 481 aa14.04□□□□□ -0.16
VRK3-209ENST00000594948 KMT5AQ9NQR1 393 aa14.04□□□□□ -0.16
VRK3-209ENST00000594948 DNAJC17Q9NVM6 304 aaKnown RBP14.04□□□□□ -0.16
VRK3-209ENST00000594948 TMOD2Q9NZR1 351 aa14.04□□□□□ -0.16
VRK3-209ENST00000594948 TBK1Q9UHD2 729 aa14.04□□□□□ -0.16
VRK3-209ENST00000594948 MYH9P35579 1960 aaKnown RBP14.03□□□□□ -0.16
VRK3-209ENST00000594948 DENND3A2RUS2 1198 aa14.03□□□□□ -0.16
VRK3-209ENST00000594948 ZBED4O75132 1171 aa14.03□□□□□ -0.16
VRK3-209ENST00000594948 GNAZP19086 355 aa14.03□□□□□ -0.16
VRK3-209ENST00000594948 PTPN7P35236 360 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms