RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 CPSF3Q9UKF6 684 aaKnown RBP25.53■■□□□ 1.68
LSM4-204ENST00000594828 PCDHB8Q9UN66 801 aa25.53■■□□□ 1.68
LSM4-204ENST00000594828 PDCD11Q14690 1871 aaKnown RBP25.52■■□□□ 1.68
LSM4-204ENST00000594828 KMT2EQ8IZD2 1858 aa25.52■■□□□ 1.68
LSM4-204ENST00000594828 WDR27A2RRH5 827 aa25.52■■□□□ 1.68
LSM4-204ENST00000594828 NASPP49321 788 aaPredicted RBP25.52■■□□□ 1.68
LSM4-204ENST00000594828 STK38Q15208 465 aa25.52■■□□□ 1.68
LSM4-204ENST00000594828 ADALQ6DHV7 355 aa25.52■■□□□ 1.68
LSM4-204ENST00000594828 ZNF280DQ6N043 979 aa25.52■■□□□ 1.68
LSM4-204ENST00000594828 DNAJC19Q96DA6 116 aa25.52■■□□□ 1.68
LSM4-204ENST00000594828 MRPL44Q9H9J2 332 aaKnown RBP25.52■■□□□ 1.68
LSM4-204ENST00000594828 HCFC1R1Q9NWW0 138 aa25.52■■□□□ 1.68
LSM4-204ENST00000594828 DNMT3BQ9UBC3 853 aaKnown RBP25.52■■□□□ 1.68
LSM4-204ENST00000594828 SEL1LQ9UBV2 794 aa25.52■■□□□ 1.68
LSM4-204ENST00000594828 CDH7Q9ULB5 785 aa25.52■■□□□ 1.68
LSM4-204ENST00000594828 MUC6Q6W4X9 2439 aa25.52■■□□□ 1.68
LSM4-204ENST00000594828 ANHXE9PGG2 379 aa25.51■■□□□ 1.67
LSM4-204ENST00000594828 PRRG1O14668 218 aa25.51■■□□□ 1.67
LSM4-204ENST00000594828 ATF2P15336 505 aa25.51■■□□□ 1.67
LSM4-204ENST00000594828 GAP43P17677 238 aa25.51■■□□□ 1.67
LSM4-204ENST00000594828 STAT6P42226 847 aa25.51■■□□□ 1.67
LSM4-204ENST00000594828 NUBP1P53384 320 aa25.51■■□□□ 1.67
LSM4-204ENST00000594828 ASTLQ6HA08 431 aaPredicted RBP25.51■■□□□ 1.67
LSM4-204ENST00000594828 LINC00301Q8NCQ3 95 aa25.51■■□□□ 1.67
LSM4-204ENST00000594828 FGF13Q92913 245 aa25.51■■□□□ 1.67
LSM4-204ENST00000594828 HVCN1Q96D96 273 aa25.51■■□□□ 1.67
LSM4-204ENST00000594828 ARHGEF37A1IGU5 675 aa25.5■■□□□ 1.67
LSM4-204ENST00000594828 TISP43B9A030 160 aa25.5■■□□□ 1.67
LSM4-204ENST00000594828 M0QZQ0 153 aa25.5■■□□□ 1.67
LSM4-204ENST00000594828 LRG1P02750 347 aa25.5■■□□□ 1.67
LSM4-204ENST00000594828 ACOT2P49753 483 aa25.5■■□□□ 1.67
LSM4-204ENST00000594828 CLCN5P51795 746 aa25.5■■□□□ 1.67
LSM4-204ENST00000594828 GUCY2FP51841 1108 aa25.5■■□□□ 1.67
LSM4-204ENST00000594828 TCF15Q12870 199 aa25.5■■□□□ 1.67
LSM4-204ENST00000594828 HTR4Q13639 388 aa25.5■■□□□ 1.67
LSM4-204ENST00000594828 PABPC1LQ4VXU2 614 aaKnown RBP25.5■■□□□ 1.67
LSM4-204ENST00000594828 SPATA1Q5VX52 437 aa25.5■■□□□ 1.67
LSM4-204ENST00000594828 TPGS2Q68CL5 300 aa25.5■■□□□ 1.67
LSM4-204ENST00000594828 JADE1Q6IE81 842 aa25.5■■□□□ 1.67
LSM4-204ENST00000594828 ALYREFQ86V81 257 aaKnown RBP25.5■■□□□ 1.67
LSM4-204ENST00000594828 TCEAL8Q8IYN2 117 aa25.5■■□□□ 1.67
LSM4-204ENST00000594828 TMEM105Q8N8V8 129 aa25.5■■□□□ 1.67
LSM4-204ENST00000594828 FLCNQ8NFG4 579 aa25.5■■□□□ 1.67
LSM4-204ENST00000594828 BEST2Q8NFU1 509 aa25.5■■□□□ 1.67
LSM4-204ENST00000594828 ITFG1Q8TB96 612 aa25.5■■□□□ 1.67
LSM4-204ENST00000594828 ZNF396Q96N95 335 aaPredicted RBP25.5■■□□□ 1.67
LSM4-204ENST00000594828 CYP4F11Q9HBI6 524 aa25.5■■□□□ 1.67
LSM4-204ENST00000594828 TFIP11Q9UBB9 837 aaKnown RBP25.5■■□□□ 1.67
LSM4-204ENST00000594828 WNT16Q9UBV4 365 aa25.5■■□□□ 1.67
LSM4-204ENST00000594828 AGO2Q9UKV8 859 aaKnown RBP25.5■■□□□ 1.67
LSM4-204ENST00000594828 STYXL1Q9Y6J8 313 aa25.5■■□□□ 1.67
LSM4-204ENST00000594828 NUMBLQ9Y6R0 609 aa25.5■■□□□ 1.67
LSM4-204ENST00000594828 DOCK8Q8NF50 2099 aa25.49■■□□□ 1.67
LSM4-204ENST00000594828 A0A087X0B3 334 aa25.49■■□□□ 1.67
LSM4-204ENST00000594828 CFHP08603 1231 aa25.49■■□□□ 1.67
LSM4-204ENST00000594828 SRFP11831 508 aa25.49■■□□□ 1.67
LSM4-204ENST00000594828 YWHAHQ04917 246 aaPredicted RBP25.49■■□□□ 1.67
LSM4-204ENST00000594828 DSTYKQ6XUX3 929 aa25.49■■□□□ 1.67
LSM4-204ENST00000594828 HSCBQ8IWL3 235 aa25.49■■□□□ 1.67
LSM4-204ENST00000594828 SIX5Q8N196 739 aa25.49■■□□□ 1.67
LSM4-204ENST00000594828 ST13P5Q8NFI4 369 aaPredicted RBP25.49■■□□□ 1.67
LSM4-204ENST00000594828 STRA6Q9BX79 667 aa25.49■■□□□ 1.67
LSM4-204ENST00000594828 TBC1D7Q9P0N9 293 aa25.49■■□□□ 1.67
LSM4-204ENST00000594828 KCNH3Q9ULD8 1083 aa25.49■■□□□ 1.67
LSM4-204ENST00000594828 TIMM13Q9Y5L4 95 aaPredicted RBP25.49■■□□□ 1.67
LSM4-204ENST00000594828 DOCK6Q96HP0 2047 aa25.48■■□□□ 1.67
LSM4-204ENST00000594828 SPTLC2O15270 562 aa25.48■■□□□ 1.67
LSM4-204ENST00000594828 PPP1R37O75864 691 aa25.48■■□□□ 1.67
LSM4-204ENST00000594828 SEC24AO95486 1093 aa25.48■■□□□ 1.67
LSM4-204ENST00000594828 HSP90AA1P07900 732 aaKnown RBP25.48■■□□□ 1.67
LSM4-204ENST00000594828 IDEP14735 1019 aa25.48■■□□□ 1.67
LSM4-204ENST00000594828 PTPN2P17706 415 aa25.48■■□□□ 1.67
LSM4-204ENST00000594828 AARSP49588 968 aaKnown RBP eCLIP25.48■■□□□ 1.67
LSM4-204ENST00000594828 POSTNQ15063 836 aa25.48■■□□□ 1.67
LSM4-204ENST00000594828 USP37Q86T82 979 aa25.48■■□□□ 1.67
LSM4-204ENST00000594828 PDILTQ8N807 584 aa25.48■■□□□ 1.67
LSM4-204ENST00000594828 POMGNT1Q8WZA1 660 aa25.48■■□□□ 1.67
LSM4-204ENST00000594828 ASB7Q9H672 318 aa25.48■■□□□ 1.67
LSM4-204ENST00000594828 EXOC7Q9UPT5 735 aa25.48■■□□□ 1.67
LSM4-204ENST00000594828 DERAQ9Y315 318 aa25.48■■□□□ 1.67
LSM4-204ENST00000594828 PPP6R2O75170 966 aa25.47■■□□□ 1.67
LSM4-204ENST00000594828 OAZ2O95190 189 aa25.47■■□□□ 1.67
LSM4-204ENST00000594828 NFICP08651 508 aa25.47■■□□□ 1.67
LSM4-204ENST00000594828 PDIA4P13667 645 aaKnown RBP25.47■■□□□ 1.67
LSM4-204ENST00000594828 NPR3P17342 541 aa25.47■■□□□ 1.67
LSM4-204ENST00000594828 TMEM132DQ14C87 1099 aa25.47■■□□□ 1.67
LSM4-204ENST00000594828 PARM1Q6UWI2 310 aa25.47■■□□□ 1.67
LSM4-204ENST00000594828 FGF14Q92915 247 aa25.47■■□□□ 1.67
LSM4-204ENST00000594828 ACCSQ96QU6 501 aa25.47■■□□□ 1.67
LSM4-204ENST00000594828 OXCT2Q9BYC2 517 aaPredicted RBP25.47■■□□□ 1.67
LSM4-204ENST00000594828 IRF2BPLQ9H1B7 796 aa25.47■■□□□ 1.67
LSM4-204ENST00000594828 IKZF4Q9H2S9 585 aa25.47■■□□□ 1.67
LSM4-204ENST00000594828 AFF4Q9UHB7 1163 aaKnown RBP25.47■■□□□ 1.67
LSM4-204ENST00000594828 MAFFQ9ULX9 164 aa25.47■■□□□ 1.67
LSM4-204ENST00000594828 MRPS23Q9Y3D9 190 aaKnown RBP25.47■■□□□ 1.67
LSM4-204ENST00000594828 PCDHB13Q9Y5F0 798 aa25.47■■□□□ 1.67
LSM4-204ENST00000594828 ZDBF2Q9HCK1 2354 aa25.47■■□□□ 1.67
LSM4-204ENST00000594828 GALR2O43603 387 aaPredicted RBP25.46■■□□□ 1.67
LSM4-204ENST00000594828 GCNT3O95395 438 aa25.46■■□□□ 1.67
LSM4-204ENST00000594828 RHOP08100 348 aa25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms