RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 CLSTN1O94985 981 aa14.2□□□□□ -0.14
VRK3-205ENST00000593919 FERP16591 822 aa14.2□□□□□ -0.14
VRK3-205ENST00000593919 AKAP5P24588 427 aa14.2□□□□□ -0.14
VRK3-205ENST00000593919 CD52P31358 61 aa14.2□□□□□ -0.14
VRK3-205ENST00000593919 YARSP54577 528 aaKnown RBP14.2□□□□□ -0.14
VRK3-205ENST00000593919 GCNT1Q02742 428 aa14.2□□□□□ -0.14
VRK3-205ENST00000593919 PTK2Q05397 1052 aa14.2□□□□□ -0.14
VRK3-205ENST00000593919 LPIN1Q14693 890 aa14.2□□□□□ -0.14
VRK3-205ENST00000593919 CEP112Q8N8E3 955 aa14.2□□□□□ -0.14
VRK3-205ENST00000593919 SMG8Q8ND04 991 aaKnown RBP14.2□□□□□ -0.14
VRK3-205ENST00000593919 SHC3Q92529 594 aa14.2□□□□□ -0.14
VRK3-205ENST00000593919 IMPG2Q9BZV3 1241 aa14.2□□□□□ -0.14
VRK3-205ENST00000593919 LACRTQ9GZZ8 138 aa14.2□□□□□ -0.14
VRK3-205ENST00000593919 PLEKHA5Q9HAU0 1116 aa14.2□□□□□ -0.14
VRK3-205ENST00000593919 PADI3Q9ULW8 664 aa14.2□□□□□ -0.14
VRK3-205ENST00000593919 C2CD2Q9Y426 696 aa14.2□□□□□ -0.14
VRK3-205ENST00000593919 ZNF263O14978 683 aa14.19□□□□□ -0.14
VRK3-205ENST00000593919 AKR1B10O60218 316 aa14.19□□□□□ -0.14
VRK3-205ENST00000593919 ASS1P00966 412 aaKnown RBP14.19□□□□□ -0.14
VRK3-205ENST00000593919 MYL6P60660 151 aa14.19□□□□□ -0.14
VRK3-205ENST00000593919 PAK2Q13177 524 aa14.19□□□□□ -0.14
VRK3-205ENST00000593919 TRPC3Q13507 836 aa14.19□□□□□ -0.14
VRK3-205ENST00000593919 TUBB2AQ13885 445 aa14.19□□□□□ -0.14
VRK3-205ENST00000593919 SPA17Q15506 151 aa14.19□□□□□ -0.14
VRK3-205ENST00000593919 ZNF571Q7Z3V5 609 aaPredicted RBP14.19□□□□□ -0.14
VRK3-205ENST00000593919 FMNL3Q8IVF7 1028 aa14.19□□□□□ -0.14
VRK3-205ENST00000593919 CD302Q8IX05 232 aa14.19□□□□□ -0.14
VRK3-205ENST00000593919 FAM126BQ8IXS8 530 aa14.19□□□□□ -0.14
VRK3-205ENST00000593919 GPR161Q8N6U8 529 aaKnown RBP14.19□□□□□ -0.14
VRK3-205ENST00000593919 KIF12Q96FN5 646 aa14.19□□□□□ -0.14
VRK3-205ENST00000593919 TUBB2BQ9BVA1 445 aa14.19□□□□□ -0.14
VRK3-205ENST00000593919 RNF39Q9H2S5 420 aa14.19□□□□□ -0.14
VRK3-205ENST00000593919 ERVK-5Q9HDB9 667 aa14.19□□□□□ -0.14
VRK3-205ENST00000593919 SIX4Q9UIU6 781 aa14.19□□□□□ -0.14
VRK3-205ENST00000593919 NUB1Q9Y5A7 615 aa14.19□□□□□ -0.14
VRK3-205ENST00000593919 BZW2Q9Y6E2 419 aaKnown RBP14.19□□□□□ -0.14
VRK3-205ENST00000593919 UMODL1Q5DID0 1318 aa14.19□□□□□ -0.14
VRK3-205ENST00000593919 TET1Q8NFU7 2136 aa14.19□□□□□ -0.14
VRK3-205ENST00000593919 ITGB3P05106 788 aa14.18□□□□□ -0.14
VRK3-205ENST00000593919 GFPT1Q06210 699 aaPredicted RBP14.18□□□□□ -0.14
VRK3-205ENST00000593919 TRAF7Q6Q0C0 670 aa14.18□□□□□ -0.14
VRK3-205ENST00000593919 ALKAL1Q6UXT8 129 aa14.18□□□□□ -0.14
VRK3-205ENST00000593919 ENOSF1Q7L5Y1 443 aa14.18□□□□□ -0.14
VRK3-205ENST00000593919 NT5DC4Q86YG4 428 aa14.18□□□□□ -0.14
VRK3-205ENST00000593919 U2AF1L4Q8WU68 220 aaKnown RBP14.18□□□□□ -0.14
VRK3-205ENST00000593919 RABGGTAQ92696 567 aa14.18□□□□□ -0.14
VRK3-205ENST00000593919 ZMAT2Q96NC0 199 aaKnown RBP14.18□□□□□ -0.14
VRK3-205ENST00000593919 SEZ6LQ9BYH1 1024 aa14.18□□□□□ -0.14
VRK3-205ENST00000593919 CRISPLD2Q9H0B8 497 aa14.18□□□□□ -0.14
VRK3-205ENST00000593919 CHST12Q9NRB3 414 aa14.18□□□□□ -0.14
VRK3-205ENST00000593919 ENC1O14682 589 aa14.18□□□□□ -0.14
VRK3-205ENST00000593919 LCA5LO95447 670 aa14.18□□□□□ -0.14
VRK3-205ENST00000593919 KRT19P08727 400 aa14.18□□□□□ -0.14
VRK3-205ENST00000593919 ZSCAN20P17040 1043 aaPredicted RBP14.18□□□□□ -0.14
VRK3-205ENST00000593919 USP8P40818 1118 aa14.18□□□□□ -0.14
VRK3-205ENST00000593919 MNX1P50219 401 aaPredicted RBP14.18□□□□□ -0.14
VRK3-205ENST00000593919 GUCY2FP51841 1108 aa14.18□□□□□ -0.14
VRK3-205ENST00000593919 VAV2P52735 878 aa14.18□□□□□ -0.14
VRK3-205ENST00000593919 CUL2Q13617 745 aa14.18□□□□□ -0.14
VRK3-205ENST00000593919 SGSM1Q2NKQ1 1148 aa14.18□□□□□ -0.14
VRK3-205ENST00000593919 GLRA4Q5JXX5 417 aa14.18□□□□□ -0.14
VRK3-205ENST00000593919 ZNF662Q6ZS27 426 aa14.18□□□□□ -0.14
VRK3-205ENST00000593919 FAM71AQ8IYT1 594 aa14.18□□□□□ -0.14
VRK3-205ENST00000593919 CXorf38Q8TB03 319 aa14.18□□□□□ -0.14
VRK3-205ENST00000593919 FAM81BQ96LP2 452 aa14.18□□□□□ -0.14
VRK3-205ENST00000593919 XYLT2Q9H1B5 865 aa14.18□□□□□ -0.14
VRK3-205ENST00000593919 FAM105AQ9NUU6 356 aa14.18□□□□□ -0.14
VRK3-205ENST00000593919 CNTN3Q9P232 1028 aa14.18□□□□□ -0.14
VRK3-205ENST00000593919 PARP2Q9UGN5 583 aa14.18□□□□□ -0.14
VRK3-205ENST00000593919 ADAMTS1Q9UHI8 967 aa14.18□□□□□ -0.14
VRK3-205ENST00000593919 PCDHB2Q9Y5E7 798 aa14.18□□□□□ -0.14
VRK3-205ENST00000593919 DUSP10Q9Y6W6 482 aa14.18□□□□□ -0.14
VRK3-205ENST00000593919 MYH10P35580 1976 aa14.17□□□□□ -0.14
VRK3-205ENST00000593919 MACROD2A1Z1Q3 448 aa14.17□□□□□ -0.14
VRK3-205ENST00000593919 MGEA5O60502 916 aa14.17□□□□□ -0.14
VRK3-205ENST00000593919 SGPL1O95470 568 aa14.17□□□□□ -0.14
VRK3-205ENST00000593919 CD4P01730 458 aa14.17□□□□□ -0.14
VRK3-205ENST00000593919 CCDC172P0C7W6 258 aa14.17□□□□□ -0.14
VRK3-205ENST00000593919 HSPA1AP0DMV8 641 aaKnown RBP14.17□□□□□ -0.14
VRK3-205ENST00000593919 HSPA1BP0DMV9 641 aaKnown RBP14.17□□□□□ -0.14
VRK3-205ENST00000593919 AMPD2Q01433 879 aa14.17□□□□□ -0.14
VRK3-205ENST00000593919 KIF5AQ12840 1032 aa14.17□□□□□ -0.14
VRK3-205ENST00000593919 MBTPS1Q14703 1052 aa14.17□□□□□ -0.14
VRK3-205ENST00000593919 SLC18A3Q16572 532 aa14.17□□□□□ -0.14
VRK3-205ENST00000593919 WHAMMP3Q1A5X7 153 aa14.17□□□□□ -0.14
VRK3-205ENST00000593919 ZNF699Q32M78 642 aa14.17□□□□□ -0.14
VRK3-205ENST00000593919 TMCO3Q6UWJ1 677 aa14.17□□□□□ -0.14
VRK3-205ENST00000593919 USP38Q8NB14 1042 aa14.17□□□□□ -0.14
VRK3-205ENST00000593919 CAGE1Q8TC20 777 aa14.17□□□□□ -0.14
VRK3-205ENST00000593919 ARMC5Q96C12 935 aa14.17□□□□□ -0.14
VRK3-205ENST00000593919 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.17□□□□□ -0.14
VRK3-205ENST00000593919 IFIH1Q9BYX4 1025 aaKnown RBP14.17□□□□□ -0.14
VRK3-205ENST00000593919 RNF19AQ9NV58 838 aa14.17□□□□□ -0.14
VRK3-205ENST00000593919 RNF216Q9NWF9 866 aaPredicted RBP14.17□□□□□ -0.14
VRK3-205ENST00000593919 KLK14Q9P0G3 267 aa14.17□□□□□ -0.14
VRK3-205ENST00000593919 SQORQ9Y6N5 450 aa14.17□□□□□ -0.14
VRK3-205ENST00000593919 SCN5AQ14524 2016 aa14.17□□□□□ -0.14
VRK3-205ENST00000593919 TANC1Q9C0D5 1861 aa14.17□□□□□ -0.14
VRK3-205ENST00000593919 TDRD15B5MCY1 1934 aaKnown RBP14.17□□□□□ -0.14
VRK3-205ENST00000593919 A0A087X0T9 212 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms