RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.11■□□□□ 0.17
PNKP-202ENST00000593706 ARHGAP28Q9P2N2 729 aa16.11■□□□□ 0.17
PNKP-202ENST00000593706 RBM19Q9Y4C8 960 aaKnown RBP16.11■□□□□ 0.17
PNKP-202ENST00000593706 PCDHGA2Q9Y5H1 932 aa16.11■□□□□ 0.17
PNKP-202ENST00000593706 SPAG17Q6Q759 2223 aa16.11■□□□□ 0.17
PNKP-202ENST00000593706 OBSL1O75147 1896 aa16.1■□□□□ 0.17
PNKP-202ENST00000593706 PP2D1A8MPX8 630 aa16.1■□□□□ 0.17
PNKP-202ENST00000593706 ZNF197O14709 1029 aa16.1■□□□□ 0.17
PNKP-202ENST00000593706 SLC16A4O15374 487 aa16.1■□□□□ 0.17
PNKP-202ENST00000593706 CPB1P15086 417 aa16.1■□□□□ 0.17
PNKP-202ENST00000593706 GRM2Q14416 872 aa16.1■□□□□ 0.17
PNKP-202ENST00000593706 PUM1Q14671 1186 aaKnown RBP eCLIP16.1■□□□□ 0.17
PNKP-202ENST00000593706 NOLC1Q14978 699 aaKnown RBP eCLIP16.1■□□□□ 0.17
PNKP-202ENST00000593706 ZRSR1Q15695 479 aaKnown RBP16.1■□□□□ 0.17
PNKP-202ENST00000593706 IL17AQ16552 155 aa16.1■□□□□ 0.17
PNKP-202ENST00000593706 XKR4Q5GH76 650 aa16.1■□□□□ 0.17
PNKP-202ENST00000593706 TPGS2Q68CL5 300 aa16.1■□□□□ 0.17
PNKP-202ENST00000593706 TANGO2Q6ICL3 276 aa16.1■□□□□ 0.17
PNKP-202ENST00000593706 IQCEQ6IPM2 695 aa16.1■□□□□ 0.17
PNKP-202ENST00000593706 TAS1R3Q7RTX0 852 aa16.1■□□□□ 0.17
PNKP-202ENST00000593706 TCEAL8Q8IYN2 117 aa16.1■□□□□ 0.17
PNKP-202ENST00000593706 DAW1Q8N136 415 aa16.1■□□□□ 0.17
PNKP-202ENST00000593706 SUMF1Q8NBK3 374 aa16.1■□□□□ 0.17
PNKP-202ENST00000593706 C18orf25Q96B23 403 aaPredicted RBP16.1■□□□□ 0.17
PNKP-202ENST00000593706 NELL2Q99435 816 aa16.1■□□□□ 0.17
PNKP-202ENST00000593706 ZFP14Q9HCL3 533 aa16.1■□□□□ 0.17
PNKP-202ENST00000593706 CNTN3Q9P232 1028 aa16.1■□□□□ 0.17
PNKP-202ENST00000593706 FBXL5Q9UKA1 691 aa16.1■□□□□ 0.17
PNKP-202ENST00000593706 LAD1O00515 517 aa16.09■□□□□ 0.17
PNKP-202ENST00000593706 SEC24AO95486 1093 aa16.09■□□□□ 0.17
PNKP-202ENST00000593706 KCNE1P15382 129 aa16.09■□□□□ 0.17
PNKP-202ENST00000593706 RPL9P32969 192 aaKnown RBP16.09■□□□□ 0.17
PNKP-202ENST00000593706 PRPHP41219 470 aa16.09■□□□□ 0.17
PNKP-202ENST00000593706 MATR3P43243 847 aaKnown RBP eCLIP16.09■□□□□ 0.17
PNKP-202ENST00000593706 RAD51AP2Q09MP3 1159 aa16.09■□□□□ 0.17
PNKP-202ENST00000593706 PRSS36Q5K4E3 855 aa16.09■□□□□ 0.17
PNKP-202ENST00000593706 CYP4A22Q5TCH4 519 aa16.09■□□□□ 0.17
PNKP-202ENST00000593706 SECISBP2LQ93073 1101 aaKnown RBP16.09■□□□□ 0.17
PNKP-202ENST00000593706 TCEAL4Q96EI5 215 aa16.09■□□□□ 0.17
PNKP-202ENST00000593706 C17orf75Q9HAS0 396 aa16.09■□□□□ 0.17
PNKP-202ENST00000593706 NDRG2Q9UN36 371 aaKnown RBP16.09■□□□□ 0.17
PNKP-202ENST00000593706 SCN1AP35498 2009 aa16.09■□□□□ 0.17
PNKP-202ENST00000593706 PROZP22891 400 aa16.08■□□□□ 0.16
PNKP-202ENST00000593706 FCARP24071 287 aa16.08■□□□□ 0.16
PNKP-202ENST00000593706 CDC25AP30304 524 aa16.08■□□□□ 0.16
PNKP-202ENST00000593706 RPS9P46781 194 aaKnown RBP16.08■□□□□ 0.16
PNKP-202ENST00000593706 ADCY1Q08828 1119 aa16.08■□□□□ 0.16
PNKP-202ENST00000593706 MAPK7Q13164 816 aa16.08■□□□□ 0.16
PNKP-202ENST00000593706 RILPL1Q5EBL4 403 aa16.08■□□□□ 0.16
PNKP-202ENST00000593706 FAM78AQ5JUQ0 283 aa16.08■□□□□ 0.16
PNKP-202ENST00000593706 RINT1Q6NUQ1 792 aa16.08■□□□□ 0.16
PNKP-202ENST00000593706 TSSK4Q6SA08 328 aa16.08■□□□□ 0.16
PNKP-202ENST00000593706 DTHD1Q6ZMT9 781 aa16.08■□□□□ 0.16
PNKP-202ENST00000593706 APPL2Q8NEU8 664 aa16.08■□□□□ 0.16
PNKP-202ENST00000593706 CLDN23Q96B33 292 aa16.08■□□□□ 0.16
PNKP-202ENST00000593706 BORCS6Q96GS4 357 aa16.08■□□□□ 0.16
PNKP-202ENST00000593706 SUSD3Q96L08 255 aa16.08■□□□□ 0.16
PNKP-202ENST00000593706 ZNF512Q96ME7 567 aaPredicted RBP16.08■□□□□ 0.16
PNKP-202ENST00000593706 TRMT61BQ9BVS5 477 aaKnown RBP16.08■□□□□ 0.16
PNKP-202ENST00000593706 TIPINQ9BVW5 301 aa16.08■□□□□ 0.16
PNKP-202ENST00000593706 ASAH2Q9NR71 780 aa16.08■□□□□ 0.16
PNKP-202ENST00000593706 ZSCAN32Q9NX65 697 aa16.08■□□□□ 0.16
PNKP-202ENST00000593706 TUBGCP4Q9UGJ1 667 aa16.08■□□□□ 0.16
PNKP-202ENST00000593706 SMG5Q9UPR3 1016 aaKnown RBP16.08■□□□□ 0.16
PNKP-202ENST00000593706 SMC3Q9UQE7 1217 aa16.08■□□□□ 0.16
PNKP-202ENST00000593706 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.08■□□□□ 0.16
PNKP-202ENST00000593706 MED19A0JLT2 244 aaPredicted RBP16.07■□□□□ 0.16
PNKP-202ENST00000593706 SFI1A8K8P3 1242 aa16.07■□□□□ 0.16
PNKP-202ENST00000593706 MAN2B1O00754 1011 aa16.07■□□□□ 0.16
PNKP-202ENST00000593706 ABLIM1O14639 778 aa16.07■□□□□ 0.16
PNKP-202ENST00000593706 TBC1D4O60343 1298 aa16.07■□□□□ 0.16
PNKP-202ENST00000593706 TOM1L1O75674 476 aa16.07■□□□□ 0.16
PNKP-202ENST00000593706 MYL4P12829 197 aa16.07■□□□□ 0.16
PNKP-202ENST00000593706 MARCKSP29966 332 aaPredicted RBP16.07■□□□□ 0.16
PNKP-202ENST00000593706 CCR2P41597 374 aa16.07■□□□□ 0.16
PNKP-202ENST00000593706 SMTNP53814 917 aa16.07■□□□□ 0.16
PNKP-202ENST00000593706 ATP2C1P98194 919 aaPredicted RBP16.07■□□□□ 0.16
PNKP-202ENST00000593706 TWF1Q12792 350 aa16.07■□□□□ 0.16
PNKP-202ENST00000593706 SEZ6Q53EL9 994 aa16.07■□□□□ 0.16
PNKP-202ENST00000593706 C1orf186Q6ZWK4 172 aa16.07■□□□□ 0.16
PNKP-202ENST00000593706 KCNK18Q7Z418 384 aa16.07■□□□□ 0.16
PNKP-202ENST00000593706 DDX12PQ92771 950 aa16.07■□□□□ 0.16
PNKP-202ENST00000593706 IRF7Q92985 503 aa16.07■□□□□ 0.16
PNKP-202ENST00000593706 BICD1Q96G01 975 aa16.07■□□□□ 0.16
PNKP-202ENST00000593706 ZBTB45Q96K62 511 aaPredicted RBP16.07■□□□□ 0.16
PNKP-202ENST00000593706 ASB16Q96NS5 453 aa16.07■□□□□ 0.16
PNKP-202ENST00000593706 MMTAG2Q9BU76 263 aaKnown RBP16.07■□□□□ 0.16
PNKP-202ENST00000593706 SLITRK6Q9H5Y7 841 aa16.07■□□□□ 0.16
PNKP-202ENST00000593706 AFF4Q9UHB7 1163 aaKnown RBP16.07■□□□□ 0.16
PNKP-202ENST00000593706 TPRP12270 2363 aaKnown RBP16.07■□□□□ 0.16
PNKP-202ENST00000593706 CACNA1BQ00975 2339 aa16.06■□□□□ 0.16
PNKP-202ENST00000593706 ATG2BQ96BY7 2078 aa16.06■□□□□ 0.16
PNKP-202ENST00000593706 CLDN3O15551 220 aa16.06■□□□□ 0.16
PNKP-202ENST00000593706 MICAL2O94851 1124 aa16.06■□□□□ 0.16
PNKP-202ENST00000593706 CXCL8P10145 99 aa16.06■□□□□ 0.16
PNKP-202ENST00000593706 PSMC3P17980 439 aa16.06■□□□□ 0.16
PNKP-202ENST00000593706 GUCY2CP25092 1073 aa16.06■□□□□ 0.16
PNKP-202ENST00000593706 GDI1P31150 447 aa16.06■□□□□ 0.16
PNKP-202ENST00000593706 YWHAHQ04917 246 aaPredicted RBP16.06■□□□□ 0.16
PNKP-202ENST00000593706 MTAPQ13126 283 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms