RNA–Protein interactions for RNA: ENST00000592619.5

VMP1-215, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-215ENST00000592619 CNOT6Q9ULM6 557 aaKnown RBP7.64□□□□□ -1.19
VMP1-215ENST00000592619 ZDHHC9Q9Y397 364 aa7.64□□□□□ -1.19
VMP1-215ENST00000592619 KCTD3Q9Y597 815 aa7.64□□□□□ -1.19
VMP1-215ENST00000592619 ZMYM3Q14202 1370 aa7.63□□□□□ -1.19
VMP1-215ENST00000592619 GRM6O15303 877 aa7.63□□□□□ -1.19
VMP1-215ENST00000592619 MATN4O95460 622 aa7.63□□□□□ -1.19
VMP1-215ENST00000592619 AHSGP02765 367 aa7.63□□□□□ -1.19
VMP1-215ENST00000592619 TAL1P17542 331 aaPredicted RBP7.63□□□□□ -1.19
VMP1-215ENST00000592619 IL6STP40189 918 aaPredicted RBP7.63□□□□□ -1.19
VMP1-215ENST00000592619 HALP42357 657 aa7.63□□□□□ -1.19
VMP1-215ENST00000592619 CREMQ03060 361 aa7.63□□□□□ -1.19
VMP1-215ENST00000592619 SYDE1Q6ZW31 735 aaPredicted RBP7.63□□□□□ -1.19
VMP1-215ENST00000592619 FRMD5Q7Z6J6 570 aa7.63□□□□□ -1.19
VMP1-215ENST00000592619 OR10H5Q8NGA6 315 aa7.63□□□□□ -1.19
VMP1-215ENST00000592619 CEP95Q96GE4 821 aa7.63□□□□□ -1.19
VMP1-215ENST00000592619 RPL10LQ96L21 214 aaKnown RBP7.63□□□□□ -1.19
VMP1-215ENST00000592619 KRTAP4-2Q9BYR5 136 aa7.63□□□□□ -1.19
VMP1-215ENST00000592619 MSL2Q9HCI7 577 aa7.63□□□□□ -1.19
VMP1-215ENST00000592619 RLIMQ9NVW2 624 aa7.63□□□□□ -1.19
VMP1-215ENST00000592619 STK32BQ9NY57 414 aa7.63□□□□□ -1.19
VMP1-215ENST00000592619 FAM30AQ9NZY2 134 aa7.63□□□□□ -1.19
VMP1-215ENST00000592619 SLC23A1Q9UHI7 598 aa7.63□□□□□ -1.19
VMP1-215ENST00000592619 RUVBL1Q9Y265 456 aaKnown RBP7.63□□□□□ -1.19
VMP1-215ENST00000592619 LAS1LQ9Y4W2 734 aaKnown RBP7.63□□□□□ -1.19
VMP1-215ENST00000592619 CLASP1Q7Z460 1538 aa7.62□□□□□ -1.19
VMP1-215ENST00000592619 CCDC189A1A4V9 331 aa7.62□□□□□ -1.19
VMP1-215ENST00000592619 F8W8V4 182 aa7.62□□□□□ -1.19
VMP1-215ENST00000592619 RFXAPO00287 272 aa7.62□□□□□ -1.19
VMP1-215ENST00000592619 PJA2O43164 708 aa7.62□□□□□ -1.19
VMP1-215ENST00000592619 FGAP02671 866 aa7.62□□□□□ -1.19
VMP1-215ENST00000592619 KRT1P04264 644 aa7.62□□□□□ -1.19
VMP1-215ENST00000592619 PARP1P09874 1014 aaKnown RBP7.62□□□□□ -1.19
VMP1-215ENST00000592619 HDCP19113 662 aa7.62□□□□□ -1.19
VMP1-215ENST00000592619 ABCB4P21439 1286 aa7.62□□□□□ -1.19
VMP1-215ENST00000592619 NPEPPSP55786 919 aa7.62□□□□□ -1.19
VMP1-215ENST00000592619 TNFAIP2Q03169 654 aa7.62□□□□□ -1.19
VMP1-215ENST00000592619 FZD5Q13467 585 aa7.62□□□□□ -1.19
VMP1-215ENST00000592619 KIF22Q14807 665 aa7.62□□□□□ -1.19
VMP1-215ENST00000592619 ACAP1Q15027 740 aa7.62□□□□□ -1.19
VMP1-215ENST00000592619 ZNF385BQ569K4 471 aa7.62□□□□□ -1.19
VMP1-215ENST00000592619 HIBCHQ6NVY1 386 aaPredicted RBP7.62□□□□□ -1.19
VMP1-215ENST00000592619 ADGRE4PQ86SQ3 457 aa7.62□□□□□ -1.19
VMP1-215ENST00000592619 TMTC2Q8N394 836 aa7.62□□□□□ -1.19
VMP1-215ENST00000592619 ANKRD42Q8N9B4 389 aa7.62□□□□□ -1.19
VMP1-215ENST00000592619 MYRIPQ8NFW9 859 aa7.62□□□□□ -1.19
VMP1-215ENST00000592619 OR6B3Q8NGW1 331 aa7.62□□□□□ -1.19
VMP1-215ENST00000592619 CFHR4Q92496 578 aa7.62□□□□□ -1.19
VMP1-215ENST00000592619 TNPO1Q92973 898 aaKnown RBP7.62□□□□□ -1.19
VMP1-215ENST00000592619 ARL8AQ96BM9 186 aa7.62□□□□□ -1.19
VMP1-215ENST00000592619 EVI5LQ96CN4 794 aa7.62□□□□□ -1.19
VMP1-215ENST00000592619 FAM84AQ96KN4 292 aa7.62□□□□□ -1.19
VMP1-215ENST00000592619 BRIP1Q9BX63 1249 aa7.62□□□□□ -1.19
VMP1-215ENST00000592619 ADAM7Q9H2U9 754 aa7.62□□□□□ -1.19
VMP1-215ENST00000592619 IL23AQ9NPF7 189 aa7.62□□□□□ -1.19
VMP1-215ENST00000592619 COL20A1Q9P218 1284 aa7.62□□□□□ -1.19
VMP1-215ENST00000592619 NR2E1Q9Y466 385 aa7.62□□□□□ -1.19
VMP1-215ENST00000592619 PAXBP1Q9Y5B6 917 aa7.62□□□□□ -1.19
VMP1-215ENST00000592619 SLC4A7Q9Y6M7 1214 aa7.62□□□□□ -1.19
VMP1-215ENST00000592619 A0A1W2PPC4 97 aa7.61□□□□□ -1.19
VMP1-215ENST00000592619 PRSS29PA6NIE9 313 aa7.61□□□□□ -1.19
VMP1-215ENST00000592619 SLC26A4O43511 780 aa7.61□□□□□ -1.19
VMP1-215ENST00000592619 SLC43A1O75387 559 aa7.61□□□□□ -1.19
VMP1-215ENST00000592619 THP07101 528 aa7.61□□□□□ -1.19
VMP1-215ENST00000592619 GNAI3P08754 354 aa7.61□□□□□ -1.19
VMP1-215ENST00000592619 SBK3P0C264 359 aa7.61□□□□□ -1.19
VMP1-215ENST00000592619 RAP2AP10114 183 aa7.61□□□□□ -1.19
VMP1-215ENST00000592619 ATP5JP18859 108 aa7.61□□□□□ -1.19
VMP1-215ENST00000592619 GNAI1P63096 354 aa7.61□□□□□ -1.19
VMP1-215ENST00000592619 EXOSC9Q06265 439 aaKnown RBP7.61□□□□□ -1.19
VMP1-215ENST00000592619 RNF151Q2KHN1 245 aa7.61□□□□□ -1.19
VMP1-215ENST00000592619 ZNF568Q3ZCX4 644 aa7.61□□□□□ -1.19
VMP1-215ENST00000592619 CCDC93Q567U6 631 aa7.61□□□□□ -1.19
VMP1-215ENST00000592619 PRR16Q569H4 304 aa7.61□□□□□ -1.19
VMP1-215ENST00000592619 CIAPIN1Q6FI81 312 aa7.61□□□□□ -1.19
VMP1-215ENST00000592619 ATG14Q6ZNE5 492 aa7.61□□□□□ -1.19
VMP1-215ENST00000592619 ZNF761Q86XN6 746 aaPredicted RBP7.61□□□□□ -1.19
VMP1-215ENST00000592619 NKAPQ8N5F7 415 aaKnown RBP7.61□□□□□ -1.19
VMP1-215ENST00000592619 NLGN4YQ8NFZ3 816 aaPredicted RBP7.61□□□□□ -1.19
VMP1-215ENST00000592619 ZSCAN18Q8TBC5 510 aaPredicted RBP7.61□□□□□ -1.19
VMP1-215ENST00000592619 BORCS6Q96GS4 357 aa7.61□□□□□ -1.19
VMP1-215ENST00000592619 P2RX7Q99572 595 aaKnown RBP7.61□□□□□ -1.19
VMP1-215ENST00000592619 NDC1Q9BTX1 674 aa7.61□□□□□ -1.19
VMP1-215ENST00000592619 MRI1Q9BV20 369 aa7.61□□□□□ -1.19
VMP1-215ENST00000592619 UBA5Q9GZZ9 404 aa7.61□□□□□ -1.19
VMP1-215ENST00000592619 CFAP97Q9P2B7 532 aa7.61□□□□□ -1.19
VMP1-215ENST00000592619 RGS17Q9UGC6 210 aaPredicted RBP7.61□□□□□ -1.19
VMP1-215ENST00000592619 SMG5Q9UPR3 1016 aaKnown RBP7.61□□□□□ -1.19
VMP1-215ENST00000592619 NUP160Q12769 1436 aa7.61□□□□□ -1.19
VMP1-215ENST00000592619 CEP170Q5SW79 1584 aa7.6□□□□□ -1.19
VMP1-215ENST00000592619 TRIM43BA6NCK2 446 aa7.6□□□□□ -1.19
VMP1-215ENST00000592619 TCAF2A6NFQ2 919 aa7.6□□□□□ -1.19
VMP1-215ENST00000592619 CXorf49A8MYA2 514 aaPredicted RBP7.6□□□□□ -1.19
VMP1-215ENST00000592619 APOL1O14791 398 aa7.6□□□□□ -1.19
VMP1-215ENST00000592619 PIP5K1CO60331 668 aa7.6□□□□□ -1.19
VMP1-215ENST00000592619 NBNO60934 754 aa7.6□□□□□ -1.19
VMP1-215ENST00000592619 HTRA4P83105 476 aaPredicted RBP7.6□□□□□ -1.19
VMP1-215ENST00000592619 HABP2Q14520 560 aaPredicted RBP7.6□□□□□ -1.19
VMP1-215ENST00000592619 PDCD2Q16342 344 aaPredicted RBP7.6□□□□□ -1.19
VMP1-215ENST00000592619 ZNF783Q6ZMS7 281 aa7.6□□□□□ -1.19
VMP1-215ENST00000592619 PDSS2Q86YH6 399 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms