RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 FGFBP2Q9BYJ0 223 aa15.09■□□□□ 0.01
APOC1-208ENST00000592535 PANK4Q9NVE7 773 aa15.09■□□□□ 0.01
APOC1-208ENST00000592535 ARIH1Q9Y4X5 557 aaPredicted RBP15.09■□□□□ 0.01
APOC1-208ENST00000592535 STYXL1Q9Y6J8 313 aa15.09■□□□□ 0.01
APOC1-208ENST00000592535 TRIOO75962 3097 aa15.09■□□□□ 0.01
APOC1-208ENST00000592535 SCN1AP35498 2009 aa15.09■□□□□ 0.01
APOC1-208ENST00000592535 TSC2P49815 1807 aa15.08■□□□□ 0.01
APOC1-208ENST00000592535 TCHHQ07283 1943 aa15.08■□□□□ 0
APOC1-208ENST00000592535 FRMD3A2A2Y4 597 aa15.08■□□□□ 0
APOC1-208ENST00000592535 H7C4K7 107 aa15.08■□□□□ 0
APOC1-208ENST00000592535 PPEF2O14830 753 aa15.08■□□□□ 0
APOC1-208ENST00000592535 XPOTO43592 962 aaKnown RBP15.08■□□□□ 0
APOC1-208ENST00000592535 TBC1D4O60343 1298 aa15.08■□□□□ 0
APOC1-208ENST00000592535 GCNT3O95395 438 aa15.08■□□□□ 0
APOC1-208ENST00000592535 NFICP08651 508 aa15.08■□□□□ 0
APOC1-208ENST00000592535 ADSSP30520 456 aa15.08■□□□□ 0
APOC1-208ENST00000592535 HOXA9P31269 272 aa15.08■□□□□ 0
APOC1-208ENST00000592535 ARPP19P56211 112 aa15.08■□□□□ 0
APOC1-208ENST00000592535 NTHL1P78549 312 aa15.08■□□□□ 0
APOC1-208ENST00000592535 L1TD1Q5T7N2 865 aaKnown RBP15.08■□□□□ 0
APOC1-208ENST00000592535 SPATA1Q5VX52 437 aa15.08■□□□□ 0
APOC1-208ENST00000592535 KCNK12Q9HB15 430 aa15.08■□□□□ 0
APOC1-208ENST00000592535 OLFML3Q9NRN5 406 aa15.08■□□□□ 0
APOC1-208ENST00000592535 FBXL5Q9UKA1 691 aa15.08■□□□□ 0
APOC1-208ENST00000592535 AGO2Q9UKV8 859 aaKnown RBP15.08■□□□□ 0
APOC1-208ENST00000592535 PCDHB8Q9UN66 801 aa15.08■□□□□ 0
APOC1-208ENST00000592535 POLIQ9UNA4 740 aa15.08■□□□□ 0
APOC1-208ENST00000592535 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.08■□□□□ 0
APOC1-208ENST00000592535 WDR27A2RRH5 827 aa15.07■□□□□ 0
APOC1-208ENST00000592535 M0QZQ0 153 aa15.07■□□□□ 0
APOC1-208ENST00000592535 PDGFBP01127 241 aaPredicted RBP15.07■□□□□ 0
APOC1-208ENST00000592535 FSHRP23945 695 aa15.07■□□□□ 0
APOC1-208ENST00000592535 PLA2G5P39877 138 aa15.07■□□□□ 0
APOC1-208ENST00000592535 AARSP49588 968 aaKnown RBP eCLIP15.07■□□□□ 0
APOC1-208ENST00000592535 UVSSAQ2YD98 709 aa15.07■□□□□ 0
APOC1-208ENST00000592535 CTXN3Q4LDR2 81 aa15.07■□□□□ 0
APOC1-208ENST00000592535 ZNF280DQ6N043 979 aa15.07■□□□□ 0
APOC1-208ENST00000592535 CRELD2Q6UXH1 353 aaPredicted RBP15.07■□□□□ 0
APOC1-208ENST00000592535 SUGP1Q8IWZ8 645 aaKnown RBP15.07■□□□□ 0
APOC1-208ENST00000592535 CD302Q8IX05 232 aa15.07■□□□□ 0
APOC1-208ENST00000592535 FBXL6Q8N531 539 aa15.07■□□□□ 0
APOC1-208ENST00000592535 APPL2Q8NEU8 664 aa15.07■□□□□ 0
APOC1-208ENST00000592535 BEST2Q8NFU1 509 aa15.07■□□□□ 0
APOC1-208ENST00000592535 ZNF461Q8TAF7 563 aa15.07■□□□□ 0
APOC1-208ENST00000592535 RSAD2Q8WXG1 361 aa15.07■□□□□ 0
APOC1-208ENST00000592535 POMGNT1Q8WZA1 660 aa15.07■□□□□ 0
APOC1-208ENST00000592535 DHX58Q96C10 678 aa15.07■□□□□ 0
APOC1-208ENST00000592535 ACCSQ96QU6 501 aa15.07■□□□□ 0
APOC1-208ENST00000592535 TSPAN18Q96SJ8 248 aa15.07■□□□□ 0
APOC1-208ENST00000592535 TNMDQ9H2S6 317 aa15.07■□□□□ 0
APOC1-208ENST00000592535 KBTBD4Q9NVX7 518 aa15.07■□□□□ 0
APOC1-208ENST00000592535 EPS15L1Q9UBC2 864 aa15.07■□□□□ 0
APOC1-208ENST00000592535 EXOC7Q9UPT5 735 aa15.07■□□□□ 0
APOC1-208ENST00000592535 XYLBO75191 536 aa15.06■□□□□ 0
APOC1-208ENST00000592535 ABLIM3O94929 683 aa15.06■□□□□ 0
APOC1-208ENST00000592535 POU2F2P09086 479 aa15.06■□□□□ 0
APOC1-208ENST00000592535 TDGQ13569 410 aa15.06■□□□□ 0
APOC1-208ENST00000592535 TMEM132DQ14C87 1099 aa15.06■□□□□ 0
APOC1-208ENST00000592535 CCDC65Q8IXS2 484 aa15.06■□□□□ 0
APOC1-208ENST00000592535 ZSWIM2Q8NEG5 633 aa15.06■□□□□ 0
APOC1-208ENST00000592535 KCNG4Q8TDN1 519 aa15.06■□□□□ 0
APOC1-208ENST00000592535 FAM122AQ96E09 287 aa15.06■□□□□ 0
APOC1-208ENST00000592535 CUEDC2Q9H467 287 aa15.06■□□□□ 0
APOC1-208ENST00000592535 ASB7Q9H672 318 aa15.06■□□□□ 0
APOC1-208ENST00000592535 HCFC1R1Q9NWW0 138 aa15.06■□□□□ 0
APOC1-208ENST00000592535 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.06■□□□□ 0
APOC1-208ENST00000592535 IGSF9Q9P2J2 1179 aa15.06■□□□□ 0
APOC1-208ENST00000592535 PCDHA7Q9UN72 937 aa15.06■□□□□ 0
APOC1-208ENST00000592535 DERAQ9Y315 318 aa15.06■□□□□ 0
APOC1-208ENST00000592535 PCDHB13Q9Y5F0 798 aa15.06■□□□□ 0
APOC1-208ENST00000592535 TIMM13Q9Y5L4 95 aaPredicted RBP15.06■□□□□ 0
APOC1-208ENST00000592535 PRRG1O14668 218 aa15.05■□□□□ -0
APOC1-208ENST00000592535 PRPF6O94906 941 aaKnown RBP15.05■□□□□ -0
APOC1-208ENST00000592535 SEC24AO95486 1093 aa15.05■□□□□ -0
APOC1-208ENST00000592535 LAMP2P13473 410 aa15.05■□□□□ -0
APOC1-208ENST00000592535 ATF2P15336 505 aa15.05■□□□□ -0
APOC1-208ENST00000592535 ELF1P32519 619 aa15.05■□□□□ -0
APOC1-208ENST00000592535 ME1P48163 572 aa15.05■□□□□ -0
APOC1-208ENST00000592535 VCPP55072 806 aaKnown RBP15.05■□□□□ -0
APOC1-208ENST00000592535 DNM1Q05193 864 aaKnown RBP15.05■□□□□ -0
APOC1-208ENST00000592535 ALCAMQ13740 583 aa15.05■□□□□ -0
APOC1-208ENST00000592535 POSTNQ15063 836 aa15.05■□□□□ -0
APOC1-208ENST00000592535 C9orf57Q5W0N0 161 aa15.05■□□□□ -0
APOC1-208ENST00000592535 DSTYKQ6XUX3 929 aa15.05■□□□□ -0
APOC1-208ENST00000592535 RTL10Q7L3V2 364 aa15.05■□□□□ -0
APOC1-208ENST00000592535 SYCP3Q8IZU3 236 aa15.05■□□□□ -0
APOC1-208ENST00000592535 IQUBQ8NA54 791 aa15.05■□□□□ -0
APOC1-208ENST00000592535 GLIS3Q8NEA6 775 aa15.05■□□□□ -0
APOC1-208ENST00000592535 ST13P5Q8NFI4 369 aaPredicted RBP15.05■□□□□ -0
APOC1-208ENST00000592535 HPS3Q969F9 1004 aa15.05■□□□□ -0
APOC1-208ENST00000592535 SAAL1Q96ER3 474 aa15.05■□□□□ -0
APOC1-208ENST00000592535 TRIM9Q9C026 710 aa15.05■□□□□ -0
APOC1-208ENST00000592535 LRRC27Q9C0I9 530 aa15.05■□□□□ -0
APOC1-208ENST00000592535 DNMT3BQ9UBC3 853 aaKnown RBP15.05■□□□□ -0
APOC1-208ENST00000592535 DUSP12Q9UNI6 340 aa15.05■□□□□ -0
APOC1-208ENST00000592535 ZDBF2Q9HCK1 2354 aa15.05■□□□□ -0
APOC1-208ENST00000592535 ARHGEF37A1IGU5 675 aa15.04■□□□□ -0
APOC1-208ENST00000592535 PIRO00625 290 aa15.04■□□□□ -0
APOC1-208ENST00000592535 SPTLC1O15269 473 aa15.04■□□□□ -0
APOC1-208ENST00000592535 NARSO43776 548 aaKnown RBP15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms