RNA–Protein interactions for RNA: ENST00000592445.1

PRKCSH-216, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-216ENST00000592445 ZSCAN18Q8TBC5 510 aaPredicted RBP21.53■■□□□ 1.04
PRKCSH-216ENST00000592445 CSGALNACT1Q8TDX6 532 aa21.53■■□□□ 1.04
PRKCSH-216ENST00000592445 TMEM60Q9H2L4 133 aa21.53■■□□□ 1.04
PRKCSH-216ENST00000592445 SLITRK6Q9H5Y7 841 aa21.53■■□□□ 1.04
PRKCSH-216ENST00000592445 POLD4Q9HCU8 107 aa21.53■■□□□ 1.04
PRKCSH-216ENST00000592445 ASAH2Q9NR71 780 aa21.53■■□□□ 1.04
PRKCSH-216ENST00000592445 FBXL5Q9UKA1 691 aa21.53■■□□□ 1.04
PRKCSH-216ENST00000592445 HRO43593 1189 aa21.52■■□□□ 1.04
PRKCSH-216ENST00000592445 FDPSP14324 419 aaKnown RBP21.52■■□□□ 1.04
PRKCSH-216ENST00000592445 GJA1P17302 382 aa21.52■■□□□ 1.04
PRKCSH-216ENST00000592445 FOSBP53539 338 aa21.52■■□□□ 1.04
PRKCSH-216ENST00000592445 TWF1Q12792 350 aa21.52■■□□□ 1.04
PRKCSH-216ENST00000592445 LRRC32Q14392 662 aa21.52■■□□□ 1.04
PRKCSH-216ENST00000592445 MFSD6LQ8IWD5 586 aa21.52■■□□□ 1.04
PRKCSH-216ENST00000592445 YAF2Q8IY57 180 aa21.52■■□□□ 1.04
PRKCSH-216ENST00000592445 DIS3L2Q8IYB7 885 aaKnown RBP21.52■■□□□ 1.04
PRKCSH-216ENST00000592445 SPEM1Q8N4L4 309 aa21.52■■□□□ 1.04
PRKCSH-216ENST00000592445 LEMD2Q8NC56 503 aa21.52■■□□□ 1.04
PRKCSH-216ENST00000592445 TICRRQ7Z2Z1 1910 aa21.51■■□□□ 1.03
PRKCSH-216ENST00000592445 HEPACAM2A8MVW5 462 aa21.51■■□□□ 1.03
PRKCSH-216ENST00000592445 K7ERI5 159 aa21.51■■□□□ 1.03
PRKCSH-216ENST00000592445 GDF9O60383 454 aa21.51■■□□□ 1.03
PRKCSH-216ENST00000592445 FOXD2O60548 495 aaPredicted RBP21.51■■□□□ 1.03
PRKCSH-216ENST00000592445 MCM7P33993 719 aa21.51■■□□□ 1.03
PRKCSH-216ENST00000592445 CNR2P34972 360 aa21.51■■□□□ 1.03
PRKCSH-216ENST00000592445 GRM5P41594 1212 aa21.51■■□□□ 1.03
PRKCSH-216ENST00000592445 KPNA1P52294 538 aaPredicted RBP21.51■■□□□ 1.03
PRKCSH-216ENST00000592445 DMWDQ09019 674 aa21.51■■□□□ 1.03
PRKCSH-216ENST00000592445 SRSF5Q13243 272 aaKnown RBP21.51■■□□□ 1.03
PRKCSH-216ENST00000592445 TRIM29Q14134 588 aa21.51■■□□□ 1.03
PRKCSH-216ENST00000592445 GAS6Q14393 721 aa21.51■■□□□ 1.03
PRKCSH-216ENST00000592445 HEATR6Q6AI08 1181 aaKnown RBP21.51■■□□□ 1.03
PRKCSH-216ENST00000592445 CEP120Q8N960 986 aa21.51■■□□□ 1.03
PRKCSH-216ENST00000592445 TRPV4Q9HBA0 871 aa21.51■■□□□ 1.03
PRKCSH-216ENST00000592445 CEP72Q9P209 647 aa21.51■■□□□ 1.03
PRKCSH-216ENST00000592445 TNFSF13BQ9Y275 285 aa21.51■■□□□ 1.03
PRKCSH-216ENST00000592445 CFAP47Q6ZTR5 3102 aa21.51■■□□□ 1.03
PRKCSH-216ENST00000592445 MOSPD3O75425 235 aa21.5■■□□□ 1.03
PRKCSH-216ENST00000592445 RPA1P27694 616 aa21.5■■□□□ 1.03
PRKCSH-216ENST00000592445 PTGDRQ13258 359 aa21.5■■□□□ 1.03
PRKCSH-216ENST00000592445 MRPL58Q14197 206 aaKnown RBP21.5■■□□□ 1.03
PRKCSH-216ENST00000592445 TEAD2Q15562 447 aa21.5■■□□□ 1.03
PRKCSH-216ENST00000592445 ZNF568Q3ZCX4 644 aa21.5■■□□□ 1.03
PRKCSH-216ENST00000592445 ZNF280DQ6N043 979 aa21.5■■□□□ 1.03
PRKCSH-216ENST00000592445 C1orf228Q6PIY5 440 aa21.5■■□□□ 1.03
PRKCSH-216ENST00000592445 ALKAL1Q6UXT8 129 aa21.5■■□□□ 1.03
PRKCSH-216ENST00000592445 CEP68Q76N32 757 aa21.5■■□□□ 1.03
PRKCSH-216ENST00000592445 LONP2Q86WA8 852 aa21.5■■□□□ 1.03
PRKCSH-216ENST00000592445 DDX1Q92499 740 aaKnown RBP21.5■■□□□ 1.03
PRKCSH-216ENST00000592445 KIFAP3Q92845 792 aa21.5■■□□□ 1.03
PRKCSH-216ENST00000592445 E2F7Q96AV8 911 aa21.5■■□□□ 1.03
PRKCSH-216ENST00000592445 MSANTD3Q96H12 275 aa21.5■■□□□ 1.03
PRKCSH-216ENST00000592445 ZMAT2Q96NC0 199 aaKnown RBP21.5■■□□□ 1.03
PRKCSH-216ENST00000592445 AFF4Q9UHB7 1163 aaKnown RBP21.5■■□□□ 1.03
PRKCSH-216ENST00000592445 SLC38A8A6NNN8 435 aa21.49■■□□□ 1.03
PRKCSH-216ENST00000592445 CPB1P15086 417 aa21.49■■□□□ 1.03
PRKCSH-216ENST00000592445 RPL9P32969 192 aaKnown RBP21.49■■□□□ 1.03
PRKCSH-216ENST00000592445 MCM4P33991 863 aa21.49■■□□□ 1.03
PRKCSH-216ENST00000592445 MLLT6P55198 1093 aaPredicted RBP21.49■■□□□ 1.03
PRKCSH-216ENST00000592445 XKR4Q5GH76 650 aa21.49■■□□□ 1.03
PRKCSH-216ENST00000592445 IL31Q6EBC2 164 aa21.49■■□□□ 1.03
PRKCSH-216ENST00000592445 NECAB1Q8N987 351 aa21.49■■□□□ 1.03
PRKCSH-216ENST00000592445 APPL2Q8NEU8 664 aa21.49■■□□□ 1.03
PRKCSH-216ENST00000592445 GPR88Q9GZN0 384 aa21.49■■□□□ 1.03
PRKCSH-216ENST00000592445 CDT1Q9H211 546 aa21.49■■□□□ 1.03
PRKCSH-216ENST00000592445 RBM12Q9NTZ6 932 aaKnown RBP21.49■■□□□ 1.03
PRKCSH-216ENST00000592445 MAFFQ9ULX9 164 aa21.49■■□□□ 1.03
PRKCSH-216ENST00000592445 COL4A2P08572 1712 aa21.49■■□□□ 1.03
PRKCSH-216ENST00000592445 CCDC169A6NNP5 214 aa21.48■■□□□ 1.03
PRKCSH-216ENST00000592445 ARNTLO00327 626 aa21.48■■□□□ 1.03
PRKCSH-216ENST00000592445 EPHA5P54756 1037 aa21.48■■□□□ 1.03
PRKCSH-216ENST00000592445 ANKRD1Q15327 319 aa21.48■■□□□ 1.03
PRKCSH-216ENST00000592445 FAM200AQ8TCP9 573 aa21.48■■□□□ 1.03
PRKCSH-216ENST00000592445 C18orf25Q96B23 403 aaPredicted RBP21.48■■□□□ 1.03
PRKCSH-216ENST00000592445 ACAP3Q96P50 834 aa21.48■■□□□ 1.03
PRKCSH-216ENST00000592445 ACO2Q99798 780 aaKnown RBP21.48■■□□□ 1.03
PRKCSH-216ENST00000592445 TCHPQ9BT92 498 aa21.48■■□□□ 1.03
PRKCSH-216ENST00000592445 C8orf33Q9H7E9 229 aaPredicted RBP21.48■■□□□ 1.03
PRKCSH-216ENST00000592445 TRIP11Q15643 1979 aa21.48■■□□□ 1.03
PRKCSH-216ENST00000592445 K7ESF4 209 aa21.47■■□□□ 1.03
PRKCSH-216ENST00000592445 PAPSS2O95340 614 aaPredicted RBP21.47■■□□□ 1.03
PRKCSH-216ENST00000592445 KCNE1P15382 129 aa21.47■■□□□ 1.03
PRKCSH-216ENST00000592445 MARCKSP29966 332 aaPredicted RBP21.47■■□□□ 1.03
PRKCSH-216ENST00000592445 SOX9P48436 509 aa21.47■■□□□ 1.03
PRKCSH-216ENST00000592445 DGKKQ5KSL6 1271 aa21.47■■□□□ 1.03
PRKCSH-216ENST00000592445 HAUS3Q68CZ6 603 aa21.47■■□□□ 1.03
PRKCSH-216ENST00000592445 RNF19BQ6ZMZ0 732 aa21.47■■□□□ 1.03
PRKCSH-216ENST00000592445 Q6ZS52 159 aa21.47■■□□□ 1.03
PRKCSH-216ENST00000592445 FAM160A2Q8N612 972 aaPredicted RBP21.47■■□□□ 1.03
PRKCSH-216ENST00000592445 SHKBP1Q8TBC3 707 aa21.47■■□□□ 1.03
PRKCSH-216ENST00000592445 DDX12PQ92771 950 aa21.47■■□□□ 1.03
PRKCSH-216ENST00000592445 SUSD3Q96L08 255 aa21.47■■□□□ 1.03
PRKCSH-216ENST00000592445 BHMT2Q9H2M3 363 aa21.47■■□□□ 1.03
PRKCSH-216ENST00000592445 NCANO14594 1321 aa21.47■■□□□ 1.03
PRKCSH-216ENST00000592445 PHLPP2Q6ZVD8 1323 aa21.47■■□□□ 1.03
PRKCSH-216ENST00000592445 USP24Q9UPU5 2620 aa21.46■■□□□ 1.03
PRKCSH-216ENST00000592445 CHADO15335 359 aa21.46■■□□□ 1.03
PRKCSH-216ENST00000592445 AASDHQ4L235 1098 aaPredicted RBP21.46■■□□□ 1.03
PRKCSH-216ENST00000592445 RSPRY1Q96DX4 576 aa21.46■■□□□ 1.03
PRKCSH-216ENST00000592445 TBC1D32Q96NH3 1257 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms