RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 ZDHHC24Q6UX98 284 aa16.81■□□□□ 0.28
MBD1-227ENST00000592060 ARMC9Q7Z3E5 817 aa16.81■□□□□ 0.28
MBD1-227ENST00000592060 SH2D3CQ8N5H7 860 aa16.81■□□□□ 0.28
MBD1-227ENST00000592060 JPH2Q9BR39 696 aaPredicted RBP16.81■□□□□ 0.28
MBD1-227ENST00000592060 MTMR12Q9C0I1 747 aa16.81■□□□□ 0.28
MBD1-227ENST00000592060 SMARCAD1Q9H4L7 1026 aa16.81■□□□□ 0.28
MBD1-227ENST00000592060 PDGFCQ9NRA1 345 aa16.81■□□□□ 0.28
MBD1-227ENST00000592060 GRHL1Q9NZI5 618 aa16.81■□□□□ 0.28
MBD1-227ENST00000592060 RASAL2Q9UJF2 1139 aa16.81■□□□□ 0.28
MBD1-227ENST00000592060 HBP1O60381 514 aa16.8■□□□□ 0.28
MBD1-227ENST00000592060 PPFIA2O75334 1257 aa16.8■□□□□ 0.28
MBD1-227ENST00000592060 CST3P01034 146 aaPredicted RBP16.8■□□□□ 0.28
MBD1-227ENST00000592060 RARAP10276 462 aa16.8■□□□□ 0.28
MBD1-227ENST00000592060 TXNP10599 105 aaKnown RBP16.8■□□□□ 0.28
MBD1-227ENST00000592060 SLC1A1P43005 524 aa16.8■□□□□ 0.28
MBD1-227ENST00000592060 C2CD6Q53TS8 623 aa16.8■□□□□ 0.28
MBD1-227ENST00000592060 MPZL3Q6UWV2 235 aa16.8■□□□□ 0.28
MBD1-227ENST00000592060 TSHZ1Q6ZSZ6 1077 aa16.8■□□□□ 0.28
MBD1-227ENST00000592060 RHPN2Q8IUC4 686 aa16.8■□□□□ 0.28
MBD1-227ENST00000592060 PASD1Q8IV76 773 aa16.8■□□□□ 0.28
MBD1-227ENST00000592060 VCPIP1Q96JH7 1222 aa16.8■□□□□ 0.28
MBD1-227ENST00000592060 FMO2Q99518 471 aa16.8■□□□□ 0.28
MBD1-227ENST00000592060 TCHPQ9BT92 498 aa16.8■□□□□ 0.28
MBD1-227ENST00000592060 FZD8Q9H461 694 aa16.8■□□□□ 0.28
MBD1-227ENST00000592060 TMBIM4Q9HC24 238 aa16.8■□□□□ 0.28
MBD1-227ENST00000592060 EVPLQ92817 2033 aa16.8■□□□□ 0.28
MBD1-227ENST00000592060 FSCN2O14926 492 aa16.8■□□□□ 0.28
MBD1-227ENST00000592060 HOXC6P09630 235 aa16.8■□□□□ 0.28
MBD1-227ENST00000592060 COILP38432 576 aaPredicted RBP16.8■□□□□ 0.28
MBD1-227ENST00000592060 ZNF844Q08AG5 666 aa16.8■□□□□ 0.28
MBD1-227ENST00000592060 TTLL4Q14679 1199 aa16.8■□□□□ 0.28
MBD1-227ENST00000592060 SURF1Q15526 300 aa16.8■□□□□ 0.28
MBD1-227ENST00000592060 SPDYCQ5MJ68 293 aa16.8■□□□□ 0.28
MBD1-227ENST00000592060 CEP85LQ5SZL2 805 aa16.8■□□□□ 0.28
MBD1-227ENST00000592060 EMC10Q5UCC4 262 aa16.8■□□□□ 0.28
MBD1-227ENST00000592060 WDR78Q5VTH9 848 aa16.8■□□□□ 0.28
MBD1-227ENST00000592060 CCDC137Q6PK04 289 aaKnown RBP16.8■□□□□ 0.28
MBD1-227ENST00000592060 PHLDB2Q86SQ0 1253 aa16.8■□□□□ 0.28
MBD1-227ENST00000592060 ATP6V1G3Q96LB4 118 aa16.8■□□□□ 0.28
MBD1-227ENST00000592060 RUNDC3BQ96NL0 473 aa16.8■□□□□ 0.28
MBD1-227ENST00000592060 C11orf70Q9BRQ4 267 aa16.8■□□□□ 0.28
MBD1-227ENST00000592060 IMPG2Q9BZV3 1241 aa16.8■□□□□ 0.28
MBD1-227ENST00000592060 EFCC1Q9HA90 598 aa16.8■□□□□ 0.28
MBD1-227ENST00000592060 MTUS1Q9ULD2 1270 aa16.8■□□□□ 0.28
MBD1-227ENST00000592060 SCN4AP35499 1836 aa16.8■□□□□ 0.28
MBD1-227ENST00000592060 ASB14A6NK59 587 aa16.79■□□□□ 0.28
MBD1-227ENST00000592060 ACKR2O00590 384 aa16.79■□□□□ 0.28
MBD1-227ENST00000592060 GRIN2DO15399 1336 aa16.79■□□□□ 0.28
MBD1-227ENST00000592060 THAP12O43422 761 aa16.79■□□□□ 0.28
MBD1-227ENST00000592060 PROSCO94903 275 aa16.79■□□□□ 0.28
MBD1-227ENST00000592060 GJB1P08034 283 aa16.79■□□□□ 0.28
MBD1-227ENST00000592060 FNTAP49354 379 aa16.79■□□□□ 0.28
MBD1-227ENST00000592060 MYL6P60660 151 aa16.79■□□□□ 0.28
MBD1-227ENST00000592060 C1QBPQ07021 282 aaKnown RBP16.79■□□□□ 0.28
MBD1-227ENST00000592060 ARHGAP1Q07960 439 aa16.79■□□□□ 0.28
MBD1-227ENST00000592060 SNAPC2Q13487 334 aa16.79■□□□□ 0.28
MBD1-227ENST00000592060 TFDP1Q14186 410 aa16.79■□□□□ 0.28
MBD1-227ENST00000592060 LIN9Q5TKA1 542 aa16.79■□□□□ 0.28
MBD1-227ENST00000592060 KCTD16Q68DU8 428 aa16.79■□□□□ 0.28
MBD1-227ENST00000592060 PLEKHA7Q6IQ23 1121 aa16.79■□□□□ 0.28
MBD1-227ENST00000592060 PPP1R2P3Q6NXS1 205 aa16.79■□□□□ 0.28
MBD1-227ENST00000592060 ARMCX2Q7L311 632 aa16.79■□□□□ 0.28
MBD1-227ENST00000592060 DDX27Q96GQ7 796 aaKnown RBP16.79■□□□□ 0.28
MBD1-227ENST00000592060 ADAM22Q9P0K1 906 aa16.79■□□□□ 0.28
MBD1-227ENST00000592060 SNX24Q9Y343 169 aa16.79■□□□□ 0.28
MBD1-227ENST00000592060 HMGB1P1B2RPK0 211 aaPredicted RBP16.78■□□□□ 0.28
MBD1-227ENST00000592060 PODXLO00592 558 aa16.78■□□□□ 0.28
MBD1-227ENST00000592060 C22orf31O95567 290 aa16.78■□□□□ 0.28
MBD1-227ENST00000592060 SSTR3P32745 418 aaPredicted RBP16.78■□□□□ 0.28
MBD1-227ENST00000592060 RPL21P46778 160 aaKnown RBP16.78■□□□□ 0.28
MBD1-227ENST00000592060 CLCN3P51790 818 aa16.78■□□□□ 0.28
MBD1-227ENST00000592060 MBTD1Q05BQ5 628 aa16.78■□□□□ 0.28
MBD1-227ENST00000592060 DHX9Q08211 1270 aaKnown RBP16.78■□□□□ 0.28
MBD1-227ENST00000592060 ATF7IP2Q5U623 682 aa16.78■□□□□ 0.28
MBD1-227ENST00000592060 EEF1DP3Q658K8 133 aa16.78■□□□□ 0.28
MBD1-227ENST00000592060 KDM7AQ6ZMT4 941 aa16.78■□□□□ 0.28
MBD1-227ENST00000592060 OR2W6PQ8NHA6 318 aa16.78■□□□□ 0.28
MBD1-227ENST00000592060 UBLCP1Q8WVY7 318 aaPredicted RBP16.78■□□□□ 0.28
MBD1-227ENST00000592060 ZBTB10Q96DT7 871 aa16.78■□□□□ 0.28
MBD1-227ENST00000592060 SYT17Q9BSW7 474 aa16.78■□□□□ 0.28
MBD1-227ENST00000592060 CAPS2Q9BXY5 557 aa16.78■□□□□ 0.28
MBD1-227ENST00000592060 NIF3L1Q9GZT8 377 aa16.78■□□□□ 0.28
MBD1-227ENST00000592060 LRRC19Q9H756 370 aa16.78■□□□□ 0.28
MBD1-227ENST00000592060 MYO1FO00160 1098 aa16.78■□□□□ 0.28
MBD1-227ENST00000592060 B4GALT5O43286 388 aa16.78■□□□□ 0.28
MBD1-227ENST00000592060 CYP2C8P10632 490 aa16.78■□□□□ 0.28
MBD1-227ENST00000592060 IRAK1P51617 712 aa16.78■□□□□ 0.28
MBD1-227ENST00000592060 MAMLD1Q13495 774 aa16.78■□□□□ 0.28
MBD1-227ENST00000592060 DUOXA2Q1HG44 320 aa16.78■□□□□ 0.28
MBD1-227ENST00000592060 ZNF568Q3ZCX4 644 aa16.78■□□□□ 0.28
MBD1-227ENST00000592060 EFCAB12Q6NXP0 572 aa16.78■□□□□ 0.28
MBD1-227ENST00000592060 MMS22LQ6ZRQ5 1243 aa16.78■□□□□ 0.28
MBD1-227ENST00000592060 GTF3C2Q8WUA4 911 aaPredicted RBP16.78■□□□□ 0.28
MBD1-227ENST00000592060 ZNF606Q8WXB4 792 aa16.78■□□□□ 0.28
MBD1-227ENST00000592060 SLCO2A1Q92959 643 aa16.78■□□□□ 0.28
MBD1-227ENST00000592060 NLRP4Q96MN2 994 aa16.78■□□□□ 0.28
MBD1-227ENST00000592060 PLVAPQ9BX97 442 aa16.78■□□□□ 0.28
MBD1-227ENST00000592060 B4GALT4O60513 344 aa16.77■□□□□ 0.28
MBD1-227ENST00000592060 IVLP07476 585 aa16.77■□□□□ 0.28
MBD1-227ENST00000592060 POTEJP0CG39 1038 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms