RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 PAX3P23760 479 aa10.91□□□□□ -0.66
BRCA1-227ENST00000591849 LRPAP1P30533 357 aa10.91□□□□□ -0.66
BRCA1-227ENST00000591849 ELF1P32519 619 aa10.91□□□□□ -0.66
BRCA1-227ENST00000591849 OR1D2P34982 312 aa10.91□□□□□ -0.66
BRCA1-227ENST00000591849 MTHFRP42898 656 aa10.91□□□□□ -0.66
BRCA1-227ENST00000591849 CLCN4P51793 760 aa10.91□□□□□ -0.66
BRCA1-227ENST00000591849 SNRPFP62306 86 aaKnown RBP10.91□□□□□ -0.66
BRCA1-227ENST00000591849 KNOP1Q1ED39 458 aaKnown RBP10.91□□□□□ -0.66
BRCA1-227ENST00000591849 LIN9Q5TKA1 542 aa10.91□□□□□ -0.66
BRCA1-227ENST00000591849 SPATA1Q5VX52 437 aa10.91□□□□□ -0.66
BRCA1-227ENST00000591849 SYCE2Q6PIF2 218 aa10.91□□□□□ -0.66
BRCA1-227ENST00000591849 TMC5Q6UXY8 1006 aa10.91□□□□□ -0.66
BRCA1-227ENST00000591849 NT5DC4Q86YG4 428 aa10.91□□□□□ -0.66
BRCA1-227ENST00000591849 BRSK2Q8IWQ3 736 aa10.91□□□□□ -0.66
BRCA1-227ENST00000591849 GJD3Q8N144 294 aa10.91□□□□□ -0.66
BRCA1-227ENST00000591849 RDH13Q8NBN7 331 aa10.91□□□□□ -0.66
BRCA1-227ENST00000591849 KREMEN2Q8NCW0 462 aa10.91□□□□□ -0.66
BRCA1-227ENST00000591849 GOLGA5Q8TBA6 731 aa10.91□□□□□ -0.66
BRCA1-227ENST00000591849 LNX1Q8TBB1 728 aaPredicted RBP10.91□□□□□ -0.66
BRCA1-227ENST00000591849 RPGRIP1Q96KN7 1286 aa10.91□□□□□ -0.66
BRCA1-227ENST00000591849 SUSD3Q96L08 255 aa10.91□□□□□ -0.66
BRCA1-227ENST00000591849 NECTIN4Q96NY8 510 aa10.91□□□□□ -0.66
BRCA1-227ENST00000591849 FNBP1Q96RU3 617 aa10.91□□□□□ -0.66
BRCA1-227ENST00000591849 PLEKHA4Q9H4M7 779 aa10.91□□□□□ -0.66
BRCA1-227ENST00000591849 SFXN1Q9H9B4 322 aa10.91□□□□□ -0.66
BRCA1-227ENST00000591849 MAN1C1Q9NR34 630 aa10.91□□□□□ -0.66
BRCA1-227ENST00000591849 DPP3Q9NY33 737 aa10.91□□□□□ -0.66
BRCA1-227ENST00000591849 HSPBP1Q9NZL4 362 aa10.91□□□□□ -0.66
BRCA1-227ENST00000591849 CGNQ9P2M7 1197 aaKnown RBP10.91□□□□□ -0.66
BRCA1-227ENST00000591849 PRKAG3Q9UGI9 489 aa10.91□□□□□ -0.66
BRCA1-227ENST00000591849 C2CD2Q9Y426 696 aa10.91□□□□□ -0.66
BRCA1-227ENST00000591849 PIEZO1Q92508 2521 aa10.91□□□□□ -0.66
BRCA1-227ENST00000591849 MUC6Q6W4X9 2439 aa10.9□□□□□ -0.66
BRCA1-227ENST00000591849 MYH11P35749 1972 aa10.9□□□□□ -0.66
BRCA1-227ENST00000591849 PLXNA4Q9HCM2 1894 aa10.9□□□□□ -0.66
BRCA1-227ENST00000591849 TGM5O43548 720 aa10.9□□□□□ -0.66
BRCA1-227ENST00000591849 KLRC4O43908 158 aa10.9□□□□□ -0.66
BRCA1-227ENST00000591849 FAM189A1O60320 539 aa10.9□□□□□ -0.66
BRCA1-227ENST00000591849 EXOC3O60645 756 aa10.9□□□□□ -0.66
BRCA1-227ENST00000591849 EFEMP2O95967 443 aa10.9□□□□□ -0.66
BRCA1-227ENST00000591849 TNNC2P02585 160 aa10.9□□□□□ -0.66
BRCA1-227ENST00000591849 KRT19P08727 400 aa10.9□□□□□ -0.66
BRCA1-227ENST00000591849 TMEM191BP0C7N4 346 aa10.9□□□□□ -0.66
BRCA1-227ENST00000591849 PRR29P0C7W0 189 aa10.9□□□□□ -0.66
BRCA1-227ENST00000591849 IGFBP6P24592 240 aaPredicted RBP10.9□□□□□ -0.66
BRCA1-227ENST00000591849 FAM160A1Q05DH4 1040 aa10.9□□□□□ -0.66
BRCA1-227ENST00000591849 KCNC3Q14003 757 aa10.9□□□□□ -0.66
BRCA1-227ENST00000591849 CBX2Q14781 532 aaPredicted RBP10.9□□□□□ -0.66
BRCA1-227ENST00000591849 ZBTB6Q15916 424 aa10.9□□□□□ -0.66
BRCA1-227ENST00000591849 CTXN3Q4LDR2 81 aa10.9□□□□□ -0.66
BRCA1-227ENST00000591849 VARS2Q5ST30 1063 aaKnown RBP10.9□□□□□ -0.66
BRCA1-227ENST00000591849 C9orf57Q5W0N0 161 aa10.9□□□□□ -0.66
BRCA1-227ENST00000591849 CRELD2Q6UXH1 353 aaPredicted RBP10.9□□□□□ -0.66
BRCA1-227ENST00000591849 EPM2AIP1Q7L775 607 aaPredicted RBP10.9□□□□□ -0.66
BRCA1-227ENST00000591849 METTL23Q86XA0 190 aa10.9□□□□□ -0.66
BRCA1-227ENST00000591849 ADHFE1Q8IWW8 467 aa10.9□□□□□ -0.66
BRCA1-227ENST00000591849 C3orf58Q8NDZ4 430 aa10.9□□□□□ -0.66
BRCA1-227ENST00000591849 HDAC7Q8WUI4 952 aa10.9□□□□□ -0.66
BRCA1-227ENST00000591849 SCFD1Q8WVM8 642 aa10.9□□□□□ -0.66
BRCA1-227ENST00000591849 FAM122AQ96E09 287 aa10.9□□□□□ -0.66
BRCA1-227ENST00000591849 ANKRD36BP1Q96IX9 119 aa10.9□□□□□ -0.66
BRCA1-227ENST00000591849 CLSTN3Q9BQT9 956 aa10.9□□□□□ -0.66
BRCA1-227ENST00000591849 PHF7Q9BWX1 381 aaPredicted RBP10.9□□□□□ -0.66
BRCA1-227ENST00000591849 S1PR5Q9H228 398 aa10.9□□□□□ -0.66
BRCA1-227ENST00000591849 ADAM7Q9H2U9 754 aa10.9□□□□□ -0.66
BRCA1-227ENST00000591849 TSHZ2Q9NRE2 1034 aa10.9□□□□□ -0.66
BRCA1-227ENST00000591849 AGPAT3Q9NRZ7 376 aa10.9□□□□□ -0.66
BRCA1-227ENST00000591849 RMND1Q9NWS8 449 aa10.9□□□□□ -0.66
BRCA1-227ENST00000591849 PCDHB8Q9UN66 801 aa10.9□□□□□ -0.66
BRCA1-227ENST00000591849 BACE2Q9Y5Z0 518 aa10.9□□□□□ -0.66
BRCA1-227ENST00000591849 CDY1Q9Y6F8 540 aa10.9□□□□□ -0.66
BRCA1-227ENST00000591849 CCDC195A0A1B0GUA6 201 aa10.89□□□□□ -0.67
BRCA1-227ENST00000591849 CALUO43852 315 aaPredicted RBP10.89□□□□□ -0.67
BRCA1-227ENST00000591849 KINO60870 393 aaKnown RBP10.89□□□□□ -0.67
BRCA1-227ENST00000591849 CLSTN1O94985 981 aa10.89□□□□□ -0.67
BRCA1-227ENST00000591849 WEE2P0C1S8 567 aa10.89□□□□□ -0.67
BRCA1-227ENST00000591849 ODC1P11926 461 aa10.89□□□□□ -0.67
BRCA1-227ENST00000591849 PLA2G5P39877 138 aa10.89□□□□□ -0.67
BRCA1-227ENST00000591849 TAF6P49848 677 aa10.89□□□□□ -0.67
BRCA1-227ENST00000591849 YWHAHQ04917 246 aaPredicted RBP10.89□□□□□ -0.67
BRCA1-227ENST00000591849 EHHADHQ08426 723 aa10.89□□□□□ -0.67
BRCA1-227ENST00000591849 DPYDQ12882 1025 aa10.89□□□□□ -0.67
BRCA1-227ENST00000591849 STK4Q13043 487 aa10.89□□□□□ -0.67
BRCA1-227ENST00000591849 PPM1LQ5SGD2 360 aa10.89□□□□□ -0.67
BRCA1-227ENST00000591849 ZNF280DQ6N043 979 aa10.89□□□□□ -0.67
BRCA1-227ENST00000591849 CD300LGQ6UXG3 332 aa10.89□□□□□ -0.67
BRCA1-227ENST00000591849 FMR1NBQ8N0W7 255 aaPredicted RBP10.89□□□□□ -0.67
BRCA1-227ENST00000591849 CSGALNACT2Q8N6G5 542 aa10.89□□□□□ -0.67
BRCA1-227ENST00000591849 XXYLT1Q8NBI6 393 aa10.89□□□□□ -0.67
BRCA1-227ENST00000591849 ZSWIM2Q8NEG5 633 aa10.89□□□□□ -0.67
BRCA1-227ENST00000591849 CCDC127Q96BQ5 260 aa10.89□□□□□ -0.67
BRCA1-227ENST00000591849 SENP8Q96LD8 212 aa10.89□□□□□ -0.67
BRCA1-227ENST00000591849 ZNF560Q96MR9 790 aa10.89□□□□□ -0.67
BRCA1-227ENST00000591849 PDE11AQ9HCR9 933 aa10.89□□□□□ -0.67
BRCA1-227ENST00000591849 MTRRQ9UBK8 725 aa10.89□□□□□ -0.67
BRCA1-227ENST00000591849 AGAP1Q9UPQ3 857 aa10.89□□□□□ -0.67
BRCA1-227ENST00000591849 HCN4Q9Y3Q4 1203 aa10.89□□□□□ -0.67
BRCA1-227ENST00000591849 ARIH1Q9Y4X5 557 aaPredicted RBP10.89□□□□□ -0.67
BRCA1-227ENST00000591849 TIMM13Q9Y5L4 95 aaPredicted RBP10.89□□□□□ -0.67
BRCA1-227ENST00000591849 CYB561D2O14569 222 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms