RNA–Protein interactions for RNA: ENST00000591584.1

VPS25-206, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-206ENST00000591584 DERAQ9Y315 318 aa11.1□□□□□ -0.63
VPS25-206ENST00000591584 C2CD2Q9Y426 696 aa11.1□□□□□ -0.63
VPS25-206ENST00000591584 NUB1Q9Y5A7 615 aa11.1□□□□□ -0.63
VPS25-206ENST00000591584 ZNF236Q9UL36 1845 aa11.09□□□□□ -0.63
VPS25-206ENST00000591584 A0A087WZ62 844 aa11.09□□□□□ -0.63
VPS25-206ENST00000591584 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.09□□□□□ -0.63
VPS25-206ENST00000591584 MYO1FO00160 1098 aa11.09□□□□□ -0.63
VPS25-206ENST00000591584 ERLIN2O94905 339 aa11.09□□□□□ -0.63
VPS25-206ENST00000591584 CST3P01034 146 aaPredicted RBP11.09□□□□□ -0.63
VPS25-206ENST00000591584 RPLP2P05387 115 aaKnown RBP11.09□□□□□ -0.63
VPS25-206ENST00000591584 CALB1P05937 261 aa11.09□□□□□ -0.63
VPS25-206ENST00000591584 PAEPP09466 180 aa11.09□□□□□ -0.63
VPS25-206ENST00000591584 STAG3L1P0CL83 205 aa11.09□□□□□ -0.63
VPS25-206ENST00000591584 GNAT1P11488 350 aa11.09□□□□□ -0.63
VPS25-206ENST00000591584 GBP1P32455 592 aa11.09□□□□□ -0.63
VPS25-206ENST00000591584 TNFSF9P41273 254 aa11.09□□□□□ -0.63
VPS25-206ENST00000591584 PLA2G4AP47712 749 aa11.09□□□□□ -0.63
VPS25-206ENST00000591584 WNT7BP56706 349 aa11.09□□□□□ -0.63
VPS25-206ENST00000591584 RWDD2BP57060 319 aa11.09□□□□□ -0.63
VPS25-206ENST00000591584 CBX1P83916 185 aa11.09□□□□□ -0.63
VPS25-206ENST00000591584 TFAMQ00059 246 aaKnown RBP11.09□□□□□ -0.63
VPS25-206ENST00000591584 TAP1Q03518 808 aa11.09□□□□□ -0.63
VPS25-206ENST00000591584 PTP4A2Q12974 167 aa11.09□□□□□ -0.63
VPS25-206ENST00000591584 SMC1AQ14683 1233 aaKnown RBP11.09□□□□□ -0.63
VPS25-206ENST00000591584 AMHR2Q16671 573 aa11.09□□□□□ -0.63
VPS25-206ENST00000591584 ZNF699Q32M78 642 aa11.09□□□□□ -0.63
VPS25-206ENST00000591584 HSP90B2PQ58FF3 399 aa11.09□□□□□ -0.63
VPS25-206ENST00000591584 ZNF667Q5HYK9 610 aa11.09□□□□□ -0.63
VPS25-206ENST00000591584 SEL1L2Q5TEA6 688 aa11.09□□□□□ -0.63
VPS25-206ENST00000591584 KIAA0319LQ8IZA0 1049 aa11.09□□□□□ -0.63
VPS25-206ENST00000591584 TMEM35BQ8NCS4 154 aa11.09□□□□□ -0.63
VPS25-206ENST00000591584 WHAMMQ8TF30 809 aa11.09□□□□□ -0.63
VPS25-206ENST00000591584 AENQ8WTP8 325 aaKnown RBP11.09□□□□□ -0.63
VPS25-206ENST00000591584 NLRP7Q8WX94 980 aa11.09□□□□□ -0.63
VPS25-206ENST00000591584 ZNF606Q8WXB4 792 aa11.09□□□□□ -0.63
VPS25-206ENST00000591584 CAVIN3Q969G5 261 aa11.09□□□□□ -0.63
VPS25-206ENST00000591584 FAM212AQ96EL1 285 aa11.09□□□□□ -0.63
VPS25-206ENST00000591584 ACAP3Q96P50 834 aa11.09□□□□□ -0.63
VPS25-206ENST00000591584 KRT12Q99456 494 aa11.09□□□□□ -0.63
VPS25-206ENST00000591584 ZSWIM1Q9BR11 485 aa11.09□□□□□ -0.63
VPS25-206ENST00000591584 FDXACB1Q9BRP7 624 aaPredicted RBP11.09□□□□□ -0.63
VPS25-206ENST00000591584 MTMR12Q9C0I1 747 aa11.09□□□□□ -0.63
VPS25-206ENST00000591584 DNAI2Q9GZS0 605 aa11.09□□□□□ -0.63
VPS25-206ENST00000591584 AP5M1Q9H0R1 490 aa11.09□□□□□ -0.63
VPS25-206ENST00000591584 CPA4Q9UI42 421 aa11.09□□□□□ -0.63
VPS25-206ENST00000591584 MTUS1Q9ULD2 1270 aa11.09□□□□□ -0.63
VPS25-206ENST00000591584 KIAA1257Q9ULG3 409 aa11.09□□□□□ -0.63
VPS25-206ENST00000591584 NOC2LQ9Y3T9 749 aaKnown RBP11.09□□□□□ -0.63
VPS25-206ENST00000591584 CEP83Q9Y592 693 aa11.09□□□□□ -0.63
VPS25-206ENST00000591584 PCDHA3Q9Y5H8 950 aa11.09□□□□□ -0.63
VPS25-206ENST00000591584 PTPRJQ12913 1337 aa11.09□□□□□ -0.63
VPS25-206ENST00000591584 MYH10P35580 1976 aa11.08□□□□□ -0.64
VPS25-206ENST00000591584 MBLAC1A4D2B0 266 aaPredicted RBP11.08□□□□□ -0.64
VPS25-206ENST00000591584 FAM187AA6NFU0 413 aa11.08□□□□□ -0.64
VPS25-206ENST00000591584 TTLL13PA6NNM8 815 aa11.08□□□□□ -0.64
VPS25-206ENST00000591584 GPR25O00155 361 aa11.08□□□□□ -0.64
VPS25-206ENST00000591584 DYNC1LI2O43237 492 aaPredicted RBP11.08□□□□□ -0.64
VPS25-206ENST00000591584 THAP12O43422 761 aa11.08□□□□□ -0.64
VPS25-206ENST00000591584 SPOPO43791 374 aa11.08□□□□□ -0.64
VPS25-206ENST00000591584 CAPN15O75808 1086 aa11.08□□□□□ -0.64
VPS25-206ENST00000591584 SASH3O75995 380 aa11.08□□□□□ -0.64
VPS25-206ENST00000591584 F2P00734 622 aa11.08□□□□□ -0.64
VPS25-206ENST00000591584 ZNF865P0CJ78 1059 aaPredicted RBP11.08□□□□□ -0.64
VPS25-206ENST00000591584 COMTP21964 271 aa11.08□□□□□ -0.64
VPS25-206ENST00000591584 CDH5P33151 784 aaPredicted RBP11.08□□□□□ -0.64
VPS25-206ENST00000591584 MAN1A1P33908 653 aa11.08□□□□□ -0.64
VPS25-206ENST00000591584 CTNNA1P35221 906 aaKnown RBP11.08□□□□□ -0.64
VPS25-206ENST00000591584 GRM5P41594 1212 aa11.08□□□□□ -0.64
VPS25-206ENST00000591584 MYL6P60660 151 aa11.08□□□□□ -0.64
VPS25-206ENST00000591584 RBP5P82980 135 aa11.08□□□□□ -0.64
VPS25-206ENST00000591584 DHX34Q14147 1143 aaKnown RBP11.08□□□□□ -0.64
VPS25-206ENST00000591584 MESDQ14696 234 aa11.08□□□□□ -0.64
VPS25-206ENST00000591584 TMEM63BQ5T3F8 832 aa11.08□□□□□ -0.64
VPS25-206ENST00000591584 ALS2CLQ60I27 953 aa11.08□□□□□ -0.64
VPS25-206ENST00000591584 IFNL1Q8IU54 200 aa11.08□□□□□ -0.64
VPS25-206ENST00000591584 GOLGA6L1Q8N7Z2 621 aa11.08□□□□□ -0.64
VPS25-206ENST00000591584 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.08□□□□□ -0.64
VPS25-206ENST00000591584 CD101Q93033 1021 aa11.08□□□□□ -0.64
VPS25-206ENST00000591584 HHIPL1Q96JK4 782 aa11.08□□□□□ -0.64
VPS25-206ENST00000591584 RNPC3Q96LT9 517 aaKnown RBP11.08□□□□□ -0.64
VPS25-206ENST00000591584 SCLT1Q96NL6 688 aa11.08□□□□□ -0.64
VPS25-206ENST00000591584 APBA2Q99767 749 aa11.08□□□□□ -0.64
VPS25-206ENST00000591584 MIS12Q9H081 205 aa11.08□□□□□ -0.64
VPS25-206ENST00000591584 RAB17Q9H0T7 212 aa11.08□□□□□ -0.64
VPS25-206ENST00000591584 LHX5Q9H2C1 402 aa11.08□□□□□ -0.64
VPS25-206ENST00000591584 PDZD7Q9H5P4 517 aa11.08□□□□□ -0.64
VPS25-206ENST00000591584 MINDY3Q9H8M7 445 aa11.08□□□□□ -0.64
VPS25-206ENST00000591584 PARVAQ9NVD7 372 aa11.08□□□□□ -0.64
VPS25-206ENST00000591584 ADAM22Q9P0K1 906 aa11.08□□□□□ -0.64
VPS25-206ENST00000591584 DMGDHQ9UI17 866 aaKnown RBP11.08□□□□□ -0.64
VPS25-206ENST00000591584 ITGA11Q9UKX5 1188 aa11.08□□□□□ -0.64
VPS25-206ENST00000591584 STRIP2Q9ULQ0 834 aa11.08□□□□□ -0.64
VPS25-206ENST00000591584 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.08□□□□□ -0.64
VPS25-206ENST00000591584 PLXNB2O15031 1838 aa11.07□□□□□ -0.64
VPS25-206ENST00000591584 GOLGB1Q14789 3259 aaKnown RBP11.07□□□□□ -0.64
VPS25-206ENST00000591584 LACTBL1A8MY62 500 aa11.07□□□□□ -0.64
VPS25-206ENST00000591584 PODXLO00592 558 aa11.07□□□□□ -0.64
VPS25-206ENST00000591584 B4GALT5O43286 388 aa11.07□□□□□ -0.64
VPS25-206ENST00000591584 SART1O43290 800 aaKnown RBP11.07□□□□□ -0.64
VPS25-206ENST00000591584 TSPAN1O60635 241 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms