RNA–Protein interactions for RNA: ENST00000591535.5

MBD1-225, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 1,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-225ENST00000591535 PDE12Q6L8Q7 609 aaKnown RBP15.23■□□□□ 0.03
MBD1-225ENST00000591535 RBM43Q6ZSC3 357 aaKnown RBP15.23■□□□□ 0.03
MBD1-225ENST00000591535 INTS8Q75QN2 995 aaKnown RBP15.23■□□□□ 0.03
MBD1-225ENST00000591535 OR5B17Q8NGF7 314 aa15.23■□□□□ 0.03
MBD1-225ENST00000591535 PARD3BQ8TEW8 1205 aa15.23■□□□□ 0.03
MBD1-225ENST00000591535 AUTS2Q8WXX7 1259 aa15.23■□□□□ 0.03
MBD1-225ENST00000591535 CGRRF1Q99675 332 aa15.23■□□□□ 0.03
MBD1-225ENST00000591535 ZBP1Q9H171 429 aa15.23■□□□□ 0.03
MBD1-225ENST00000591535 AGAP1Q9UPQ3 857 aa15.23■□□□□ 0.03
MBD1-225ENST00000591535 MAPK13O15264 365 aa15.22■□□□□ 0.03
MBD1-225ENST00000591535 URODP06132 367 aa15.22■□□□□ 0.03
MBD1-225ENST00000591535 GLUD2P49448 558 aa15.22■□□□□ 0.03
MBD1-225ENST00000591535 VAMP7P51809 220 aa15.22■□□□□ 0.03
MBD1-225ENST00000591535 SKOR2Q2VWA4 1001 aaPredicted RBP15.22■□□□□ 0.03
MBD1-225ENST00000591535 TTI2Q6NXR4 508 aa15.22■□□□□ 0.03
MBD1-225ENST00000591535 DSTYKQ6XUX3 929 aa15.22■□□□□ 0.03
MBD1-225ENST00000591535 RBM23Q86U06 439 aaKnown RBP15.22■□□□□ 0.03
MBD1-225ENST00000591535 PPP2R3CQ969Q6 453 aa15.22■□□□□ 0.03
MBD1-225ENST00000591535 NSUN3Q9H649 340 aaKnown RBP15.22■□□□□ 0.03
MBD1-225ENST00000591535 MRPL17Q9NRX2 175 aaKnown RBP15.22■□□□□ 0.03
MBD1-225ENST00000591535 RWDD2AQ9UIY3 292 aa15.22■□□□□ 0.03
MBD1-225ENST00000591535 ITGA11Q9UKX5 1188 aa15.22■□□□□ 0.03
MBD1-225ENST00000591535 PTPRJQ12913 1337 aa15.22■□□□□ 0.03
MBD1-225ENST00000591535 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.21■□□□□ 0.03
MBD1-225ENST00000591535 LRRIQ3A6PVS8 624 aaPredicted RBP15.21■□□□□ 0.03
MBD1-225ENST00000591535 PIRO00625 290 aa15.21■□□□□ 0.03
MBD1-225ENST00000591535 PPEF2O14830 753 aa15.21■□□□□ 0.03
MBD1-225ENST00000591535 PHACTR2O75167 634 aa15.21■□□□□ 0.03
MBD1-225ENST00000591535 CTSAP10619 480 aa15.21■□□□□ 0.03
MBD1-225ENST00000591535 POLR2BP30876 1174 aaKnown RBP15.21■□□□□ 0.03
MBD1-225ENST00000591535 DLG4P78352 724 aa15.21■□□□□ 0.03
MBD1-225ENST00000591535 RBP5P82980 135 aa15.21■□□□□ 0.03
MBD1-225ENST00000591535 SKIV2LQ15477 1246 aaKnown RBP15.21■□□□□ 0.03
MBD1-225ENST00000591535 TPD52L1Q16890 204 aaPredicted RBP15.21■□□□□ 0.03
MBD1-225ENST00000591535 CD300LGQ6UXG3 332 aa15.21■□□□□ 0.03
MBD1-225ENST00000591535 MRPL43Q8N983 215 aaKnown RBP15.21■□□□□ 0.03
MBD1-225ENST00000591535 C1orf127Q8N9H9 656 aa15.21■□□□□ 0.03
MBD1-225ENST00000591535 RIN2Q8WYP3 895 aaPredicted RBP15.21■□□□□ 0.03
MBD1-225ENST00000591535 DUSP9Q99956 384 aaKnown RBP15.21■□□□□ 0.03
MBD1-225ENST00000591535 TTPALQ9BTX7 342 aa15.21■□□□□ 0.03
MBD1-225ENST00000591535 MKNK1Q9BUB5 465 aa15.21■□□□□ 0.03
MBD1-225ENST00000591535 HERC2P3Q9BVR0 1158 aa15.21■□□□□ 0.03
MBD1-225ENST00000591535 IGFLR1Q9H665 355 aa15.21■□□□□ 0.03
MBD1-225ENST00000591535 TLE6Q9H808 572 aa15.21■□□□□ 0.03
MBD1-225ENST00000591535 SSX2IPQ9Y2D8 614 aa15.21■□□□□ 0.03
MBD1-225ENST00000591535 STXBP5LQ9Y2K9 1186 aa15.21■□□□□ 0.03
MBD1-225ENST00000591535 COL6A3P12111 3177 aa15.21■□□□□ 0.03
MBD1-225ENST00000591535 ANO9A1A5B4 782 aa15.21■□□□□ 0.02
MBD1-225ENST00000591535 HIDE1A8MVS5 230 aa15.21■□□□□ 0.02
MBD1-225ENST00000591535 FSCN2O14926 492 aa15.21■□□□□ 0.02
MBD1-225ENST00000591535 SLC16A3O15427 465 aaKnown RBP15.21■□□□□ 0.02
MBD1-225ENST00000591535 CLSTN1O94985 981 aa15.21■□□□□ 0.02
MBD1-225ENST00000591535 FGFR1OPO95684 399 aaKnown RBP15.21■□□□□ 0.02
MBD1-225ENST00000591535 AP3M2P53677 418 aa15.21■□□□□ 0.02
MBD1-225ENST00000591535 LILRA4P59901 499 aa15.21■□□□□ 0.02
MBD1-225ENST00000591535 BIRC3Q13489 604 aa15.21■□□□□ 0.02
MBD1-225ENST00000591535 ATG2AQ2TAZ0 1938 aa15.21■□□□□ 0.02
MBD1-225ENST00000591535 CCDC40Q4G0X9 1142 aa15.21■□□□□ 0.02
MBD1-225ENST00000591535 TCEAL5Q5H9L2 206 aa15.21■□□□□ 0.02
MBD1-225ENST00000591535 TRAPPC11Q7Z392 1133 aa15.21■□□□□ 0.02
MBD1-225ENST00000591535 CREBRFQ8IUR6 639 aa15.21■□□□□ 0.02
MBD1-225ENST00000591535 PLEKHO2Q8TD55 490 aa15.21■□□□□ 0.02
MBD1-225ENST00000591535 TMC2Q8TDI7 906 aa15.21■□□□□ 0.02
MBD1-225ENST00000591535 PRUNE2Q8WUY3 3088 aa15.21■□□□□ 0.02
MBD1-225ENST00000591535 ZNF560Q96MR9 790 aa15.21■□□□□ 0.02
MBD1-225ENST00000591535 CEP63Q96MT8 703 aa15.21■□□□□ 0.02
MBD1-225ENST00000591535 SRRTQ9BXP5 876 aaKnown RBP15.21■□□□□ 0.02
MBD1-225ENST00000591535 MMRN2Q9H8L6 949 aa15.21■□□□□ 0.02
MBD1-225ENST00000591535 PER2O15055 1255 aa15.2■□□□□ 0.02
MBD1-225ENST00000591535 EFEMP2O95967 443 aa15.2■□□□□ 0.02
MBD1-225ENST00000591535 TRIM49P0CI25 452 aa15.2■□□□□ 0.02
MBD1-225ENST00000591535 TRIM49CP0CI26 452 aa15.2■□□□□ 0.02
MBD1-225ENST00000591535 PNPLA4P41247 253 aa15.2■□□□□ 0.02
MBD1-225ENST00000591535 NRIP1P48552 1158 aa15.2■□□□□ 0.02
MBD1-225ENST00000591535 TAF6P49848 677 aa15.2■□□□□ 0.02
MBD1-225ENST00000591535 BFSP1Q12934 665 aa15.2■□□□□ 0.02
MBD1-225ENST00000591535 TRPC3Q13507 836 aa15.2■□□□□ 0.02
MBD1-225ENST00000591535 NFKBIBQ15653 356 aa15.2■□□□□ 0.02
MBD1-225ENST00000591535 PTPN14Q15678 1187 aa15.2■□□□□ 0.02
MBD1-225ENST00000591535 STX1AQ16623 288 aa15.2■□□□□ 0.02
MBD1-225ENST00000591535 KIAA0319Q5VV43 1072 aa15.2■□□□□ 0.02
MBD1-225ENST00000591535 TCERG1LQ5VWI1 586 aa15.2■□□□□ 0.02
MBD1-225ENST00000591535 FOXR2Q6PJQ5 311 aa15.2■□□□□ 0.02
MBD1-225ENST00000591535 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.2■□□□□ 0.02
MBD1-225ENST00000591535 FILIP1Q7Z7B0 1213 aa15.2■□□□□ 0.02
MBD1-225ENST00000591535 ADGRD2Q7Z7M1 963 aa15.2■□□□□ 0.02
MBD1-225ENST00000591535 RNF168Q8IYW5 571 aaPredicted RBP15.2■□□□□ 0.02
MBD1-225ENST00000591535 ZNF516Q92618 1163 aa15.2■□□□□ 0.02
MBD1-225ENST00000591535 GZF1Q9H116 711 aaPredicted RBP15.2■□□□□ 0.02
MBD1-225ENST00000591535 CHST7Q9NS84 486 aa15.2■□□□□ 0.02
MBD1-225ENST00000591535 ANO10Q9NW15 660 aa15.2■□□□□ 0.02
MBD1-225ENST00000591535 ARMCX3Q9UH62 379 aaPredicted RBP15.2■□□□□ 0.02
MBD1-225ENST00000591535 SCN1AP35498 2009 aa15.2■□□□□ 0.02
MBD1-225ENST00000591535 C2orf71A6NGG8 1288 aa15.19■□□□□ 0.02
MBD1-225ENST00000591535 IKBKBO14920 756 aa15.19■□□□□ 0.02
MBD1-225ENST00000591535 LETM1O95202 739 aaPredicted RBP15.19■□□□□ 0.02
MBD1-225ENST00000591535 PAX3P23760 479 aa15.19■□□□□ 0.02
MBD1-225ENST00000591535 ERCC5P28715 1186 aaPredicted RBP15.19■□□□□ 0.02
MBD1-225ENST00000591535 TKTP29401 623 aaKnown RBP15.19■□□□□ 0.02
MBD1-225ENST00000591535 DSG1Q02413 1049 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms