RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 ABLIM3O94929 683 aa11.39□□□□□ -0.59
VPS4B-207ENST00000591519 MCM2P49736 904 aa11.39□□□□□ -0.59
VPS4B-207ENST00000591519 GPC5P78333 572 aa11.39□□□□□ -0.59
VPS4B-207ENST00000591519 NTHL1P78549 312 aa11.39□□□□□ -0.59
VPS4B-207ENST00000591519 ATP2C1P98194 919 aaPredicted RBP11.39□□□□□ -0.59
VPS4B-207ENST00000591519 SOX4Q06945 474 aaPredicted RBP11.39□□□□□ -0.59
VPS4B-207ENST00000591519 MRPL58Q14197 206 aaKnown RBP11.39□□□□□ -0.59
VPS4B-207ENST00000591519 ANGPT1Q15389 498 aa11.39□□□□□ -0.59
VPS4B-207ENST00000591519 PARM1Q6UWI2 310 aa11.39□□□□□ -0.59
VPS4B-207ENST00000591519 MTSS1LQ765P7 747 aa11.39□□□□□ -0.59
VPS4B-207ENST00000591519 SYT2Q8N9I0 419 aaPredicted RBP11.39□□□□□ -0.59
VPS4B-207ENST00000591519 ITFG1Q8TB96 612 aa11.39□□□□□ -0.59
VPS4B-207ENST00000591519 SLC7A14Q8TBB6 771 aa11.39□□□□□ -0.59
VPS4B-207ENST00000591519 FGF14Q92915 247 aa11.39□□□□□ -0.59
VPS4B-207ENST00000591519 NKD2Q969F2 451 aaPredicted RBP11.39□□□□□ -0.59
VPS4B-207ENST00000591519 ACAP3Q96P50 834 aa11.39□□□□□ -0.59
VPS4B-207ENST00000591519 RUSC1Q9BVN2 902 aa11.39□□□□□ -0.59
VPS4B-207ENST00000591519 TBC1D17Q9HA65 648 aa11.39□□□□□ -0.59
VPS4B-207ENST00000591519 GOLGA2P5Q9HBQ8 144 aa11.39□□□□□ -0.59
VPS4B-207ENST00000591519 KCND2Q9NZV8 630 aa11.39□□□□□ -0.59
VPS4B-207ENST00000591519 CNTN3Q9P232 1028 aa11.39□□□□□ -0.59
VPS4B-207ENST00000591519 DNMT3BQ9UBC3 853 aaKnown RBP11.39□□□□□ -0.59
VPS4B-207ENST00000591519 MYO15AQ9UKN7 3530 aa11.39□□□□□ -0.59
VPS4B-207ENST00000591519 SIT1Q9Y3P8 196 aa11.39□□□□□ -0.59
VPS4B-207ENST00000591519 KIF3AQ9Y496 699 aa11.39□□□□□ -0.59
VPS4B-207ENST00000591519 CDY1Q9Y6F8 540 aa11.39□□□□□ -0.59
VPS4B-207ENST00000591519 FAM186AA6NE01 2351 aa11.39□□□□□ -0.59
VPS4B-207ENST00000591519 ARHGEF37A1IGU5 675 aa11.38□□□□□ -0.59
VPS4B-207ENST00000591519 SFI1A8K8P3 1242 aa11.38□□□□□ -0.59
VPS4B-207ENST00000591519 SYN3O14994 580 aa11.38□□□□□ -0.59
VPS4B-207ENST00000591519 CCL16O15467 120 aa11.38□□□□□ -0.59
VPS4B-207ENST00000591519 MEFVO15553 781 aaPredicted RBP11.38□□□□□ -0.59
VPS4B-207ENST00000591519 TOM1L1O75674 476 aa11.38□□□□□ -0.59
VPS4B-207ENST00000591519 PLS3P13797 630 aa11.38□□□□□ -0.59
VPS4B-207ENST00000591519 GJB2P29033 226 aa11.38□□□□□ -0.59
VPS4B-207ENST00000591519 TKTP29401 623 aaKnown RBP11.38□□□□□ -0.59
VPS4B-207ENST00000591519 BRCC3P46736 316 aa11.38□□□□□ -0.59
VPS4B-207ENST00000591519 SLC10A6Q3KNW5 377 aa11.38□□□□□ -0.59
VPS4B-207ENST00000591519 ZNF568Q3ZCX4 644 aa11.38□□□□□ -0.59
VPS4B-207ENST00000591519 ARL6IP4Q66PJ3 421 aaKnown RBP11.38□□□□□ -0.59
VPS4B-207ENST00000591519 MPZL3Q6UWV2 235 aa11.38□□□□□ -0.59
VPS4B-207ENST00000591519 ZPBP2Q6X784 338 aa11.38□□□□□ -0.59
VPS4B-207ENST00000591519 FRMD5Q7Z6J6 570 aa11.38□□□□□ -0.59
VPS4B-207ENST00000591519 TMEM161BQ8NDZ6 487 aa11.38□□□□□ -0.59
VPS4B-207ENST00000591519 SHDQ96IW2 340 aa11.38□□□□□ -0.59
VPS4B-207ENST00000591519 SNX27Q96L92 541 aa11.38□□□□□ -0.59
VPS4B-207ENST00000591519 PNMA5Q96PV4 448 aa11.38□□□□□ -0.59
VPS4B-207ENST00000591519 TCHPQ9BT92 498 aa11.38□□□□□ -0.59
VPS4B-207ENST00000591519 DDX23Q9BUQ8 820 aaKnown RBP11.38□□□□□ -0.59
VPS4B-207ENST00000591519 SEMA4AQ9H3S1 761 aa11.38□□□□□ -0.59
VPS4B-207ENST00000591519 ARHGEF3Q9NR81 526 aa11.38□□□□□ -0.59
VPS4B-207ENST00000591519 CA14Q9ULX7 337 aa11.38□□□□□ -0.59
VPS4B-207ENST00000591519 SMC3Q9UQE7 1217 aa11.38□□□□□ -0.59
VPS4B-207ENST00000591519 PCDHB3Q9Y5E6 796 aa11.38□□□□□ -0.59
VPS4B-207ENST00000591519 PODXLO00592 558 aa11.37□□□□□ -0.59
VPS4B-207ENST00000591519 SLC16A4O15374 487 aa11.37□□□□□ -0.59
VPS4B-207ENST00000591519 SLC26A4O43511 780 aa11.37□□□□□ -0.59
VPS4B-207ENST00000591519 MICAL2O94851 1124 aa11.37□□□□□ -0.59
VPS4B-207ENST00000591519 MAPTP10636 758 aaKnown RBP11.37□□□□□ -0.59
VPS4B-207ENST00000591519 ATF2P15336 505 aa11.37□□□□□ -0.59
VPS4B-207ENST00000591519 SMTNP53814 917 aa11.37□□□□□ -0.59
VPS4B-207ENST00000591519 SLC12A3P55017 1021 aa11.37□□□□□ -0.59
VPS4B-207ENST00000591519 OSTNP61366 133 aa11.37□□□□□ -0.59
VPS4B-207ENST00000591519 PABPC1LQ4VXU2 614 aaKnown RBP11.37□□□□□ -0.59
VPS4B-207ENST00000591519 BLOC1S3Q6QNY0 202 aa11.37□□□□□ -0.59
VPS4B-207ENST00000591519 NPAS3Q8IXF0 933 aa11.37□□□□□ -0.59
VPS4B-207ENST00000591519 TCEAL8Q8IYN2 117 aa11.37□□□□□ -0.59
VPS4B-207ENST00000591519 ZBTB45Q96K62 511 aaPredicted RBP11.37□□□□□ -0.59
VPS4B-207ENST00000591519 PLEKHA5Q9HAU0 1116 aa11.37□□□□□ -0.59
VPS4B-207ENST00000591519 HCFC1R1Q9NWW0 138 aa11.37□□□□□ -0.59
VPS4B-207ENST00000591519 GDE1Q9NZC3 331 aa11.37□□□□□ -0.59
VPS4B-207ENST00000591519 MAFFQ9ULX9 164 aa11.37□□□□□ -0.59
VPS4B-207ENST00000591519 POLIQ9UNA4 740 aa11.37□□□□□ -0.59
VPS4B-207ENST00000591519 CFAP54Q96N23 3096 aa11.37□□□□□ -0.59
VPS4B-207ENST00000591519 CITO14578 2027 aa11.36□□□□□ -0.59
VPS4B-207ENST00000591519 WDR27A2RRH5 827 aa11.36□□□□□ -0.59
VPS4B-207ENST00000591519 H7C4K7 107 aa11.36□□□□□ -0.59
VPS4B-207ENST00000591519 I3L4J1 428 aa11.36□□□□□ -0.59
VPS4B-207ENST00000591519 ECI2O75521 394 aa11.36□□□□□ -0.59
VPS4B-207ENST00000591519 RHOP08100 348 aa11.36□□□□□ -0.59
VPS4B-207ENST00000591519 PTPN2P17706 415 aa11.36□□□□□ -0.59
VPS4B-207ENST00000591519 SCP2P22307 547 aa11.36□□□□□ -0.59
VPS4B-207ENST00000591519 GGCXP38435 758 aa11.36□□□□□ -0.59
VPS4B-207ENST00000591519 PFKPQ01813 784 aa11.36□□□□□ -0.59
VPS4B-207ENST00000591519 ROR1Q01973 937 aa11.36□□□□□ -0.59
VPS4B-207ENST00000591519 PRKCQQ04759 706 aa11.36□□□□□ -0.59
VPS4B-207ENST00000591519 MCL1Q07820 350 aa11.36□□□□□ -0.59
VPS4B-207ENST00000591519 STRN3Q13033 797 aa11.36□□□□□ -0.59
VPS4B-207ENST00000591519 ZBTB6Q15916 424 aa11.36□□□□□ -0.59
VPS4B-207ENST00000591519 SLC44A4Q53GD3 710 aa11.36□□□□□ -0.59
VPS4B-207ENST00000591519 ARSHQ5FYA8 562 aa11.36□□□□□ -0.59
VPS4B-207ENST00000591519 TPGS2Q68CL5 300 aa11.36□□□□□ -0.59
VPS4B-207ENST00000591519 MCTP1Q6DN14 999 aa11.36□□□□□ -0.59
VPS4B-207ENST00000591519 SUSD3Q96L08 255 aa11.36□□□□□ -0.59
VPS4B-207ENST00000591519 OSBPL6Q9BZF3 934 aa11.36□□□□□ -0.59
VPS4B-207ENST00000591519 FBXL5Q9UKA1 691 aa11.36□□□□□ -0.59
VPS4B-207ENST00000591519 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.36□□□□□ -0.59
VPS4B-207ENST00000591519 DMDP11532 3685 aa11.36□□□□□ -0.59
VPS4B-207ENST00000591519 MYH15Q9Y2K3 1946 aa11.35□□□□□ -0.59
VPS4B-207ENST00000591519 KANSL1LA0AUZ9 987 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms