RNA–Protein interactions for RNA: ENST00000591472.6

SEPT9-238, Transcript of septin 9, human

TSL 4

Gene SEPT9, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEPT9-238	ENST00000591472	B3GAT3	O94766	335 aa		12.94	□□□□□ -0.34
SEPT9-238	ENST00000591472	KIF4A	O95239	1232 aa		12.94	□□□□□ -0.34
SEPT9-238	ENST00000591472	PAX3	P23760	479 aa		12.94	□□□□□ -0.34
SEPT9-238	ENST00000591472	PNPLA4	P41247	253 aa		12.94	□□□□□ -0.34
SEPT9-238	ENST00000591472	GCLM	P48507	274 aa		12.94	□□□□□ -0.34
SEPT9-238	ENST00000591472	MXI1	P50539	228 aa		12.94	□□□□□ -0.34
SEPT9-238	ENST00000591472	TPM4	P67936	248 aa		12.94	□□□□□ -0.34
SEPT9-238	ENST00000591472	RBP5	P82980	135 aa		12.94	□□□□□ -0.34
SEPT9-238	ENST00000591472	BIRC3	Q13489	604 aa		12.94	□□□□□ -0.34
SEPT9-238	ENST00000591472	MAN2A1	Q16706	1144 aa		12.94	□□□□□ -0.34
SEPT9-238	ENST00000591472	KRT39	Q6A163	491 aa		12.94	□□□□□ -0.34
SEPT9-238	ENST00000591472	SV2A	Q7L0J3	742 aa		12.94	□□□□□ -0.34
SEPT9-238	ENST00000591472	SPRED2	Q7Z698	418 aa		12.94	□□□□□ -0.34
SEPT9-238	ENST00000591472	TMEM130	Q8N3G9	435 aa		12.94	□□□□□ -0.34
SEPT9-238	ENST00000591472	LRRC52	Q8N7C0	313 aa		12.94	□□□□□ -0.34
SEPT9-238	ENST00000591472	FBXO22	Q8NEZ5	403 aa		12.94	□□□□□ -0.34
SEPT9-238	ENST00000591472	ANKRD20A12P	Q8NF67	263 aa		12.94	□□□□□ -0.34
SEPT9-238	ENST00000591472	RABGGTA	Q92696	567 aa		12.94	□□□□□ -0.34
SEPT9-238	ENST00000591472	IGSF21	Q96ID5	467 aa		12.94	□□□□□ -0.34
SEPT9-238	ENST00000591472	ZNF560	Q96MR9	790 aa		12.94	□□□□□ -0.34
SEPT9-238	ENST00000591472	TUBGCP2	Q9BSJ2	902 aa		12.94	□□□□□ -0.34
SEPT9-238	ENST00000591472	C11orf84	Q9BUA3	381 aa	Predicted RBP	12.94	□□□□□ -0.34
SEPT9-238	ENST00000591472	MARCH5	Q9NX47	278 aa		12.94	□□□□□ -0.34
SEPT9-238	ENST00000591472	STK39	Q9UEW8	545 aa		12.94	□□□□□ -0.34
SEPT9-238	ENST00000591472	SIX4	Q9UIU6	781 aa		12.94	□□□□□ -0.34
SEPT9-238	ENST00000591472	ADAM28	Q9UKQ2	775 aa		12.94	□□□□□ -0.34
SEPT9-238	ENST00000591472	AGAP1	Q9UPQ3	857 aa		12.94	□□□□□ -0.34
SEPT9-238	ENST00000591472	R3HCC1	Q9Y3T6	440 aa	Known RBP	12.94	□□□□□ -0.34
SEPT9-238	ENST00000591472	TRANK1	O15050	2925 aa		12.93	□□□□□ -0.34
SEPT9-238	ENST00000591472		F8W810	466 aa		12.93	□□□□□ -0.34
SEPT9-238	ENST00000591472	SOX1	O00570	391 aa	Predicted RBP	12.93	□□□□□ -0.34
SEPT9-238	ENST00000591472	PPEF2	O14830	753 aa		12.93	□□□□□ -0.34
SEPT9-238	ENST00000591472	PMM2	O15305	246 aa		12.93	□□□□□ -0.34
SEPT9-238	ENST00000591472	N4BP1	O75113	896 aa	Known RBP	12.93	□□□□□ -0.34
SEPT9-238	ENST00000591472	TADA2A	O75478	443 aa		12.93	□□□□□ -0.34
SEPT9-238	ENST00000591472	FGF18	O76093	207 aa		12.93	□□□□□ -0.34
SEPT9-238	ENST00000591472	AFP	P02771	609 aa	Known RBP	12.93	□□□□□ -0.34
SEPT9-238	ENST00000591472	KRT19	P08727	400 aa		12.93	□□□□□ -0.34
SEPT9-238	ENST00000591472	ATP1A3	P13637	1013 aa		12.93	□□□□□ -0.34
SEPT9-238	ENST00000591472	POLR2B	P30876	1174 aa	Known RBP	12.93	□□□□□ -0.34
SEPT9-238	ENST00000591472	FMO5	P49326	533 aa		12.93	□□□□□ -0.34
SEPT9-238	ENST00000591472	PLCB3	Q01970	1234 aa		12.93	□□□□□ -0.34
SEPT9-238	ENST00000591472	KRT17	Q04695	432 aa		12.93	□□□□□ -0.34
SEPT9-238	ENST00000591472	KCNH2	Q12809	1159 aa		12.93	□□□□□ -0.34
SEPT9-238	ENST00000591472	TRPC3	Q13507	836 aa		12.93	□□□□□ -0.34
SEPT9-238	ENST00000591472	HABP4	Q5JVS0	413 aa	Known RBP	12.93	□□□□□ -0.34
SEPT9-238	ENST00000591472	TMEM173	Q86WV6	379 aa	Predicted RBP	12.93	□□□□□ -0.34
SEPT9-238	ENST00000591472	KLHL23	Q8NBE8	558 aa		12.93	□□□□□ -0.34
SEPT9-238	ENST00000591472	C3orf58	Q8NDZ4	430 aa		12.93	□□□□□ -0.34
SEPT9-238	ENST00000591472	BCL7C	Q8WUZ0	217 aa	Predicted RBP	12.93	□□□□□ -0.34
SEPT9-238	ENST00000591472	TMEM169	Q96HH4	297 aa		12.93	□□□□□ -0.34
SEPT9-238	ENST00000591472	MMRN2	Q9H8L6	949 aa		12.93	□□□□□ -0.34
SEPT9-238	ENST00000591472	MTUS1	Q9ULD2	1270 aa		12.93	□□□□□ -0.34
SEPT9-238	ENST00000591472	NUB1	Q9Y5A7	615 aa		12.93	□□□□□ -0.34
SEPT9-238	ENST00000591472	SCN1A	P35498	2009 aa		12.93	□□□□□ -0.34
SEPT9-238	ENST00000591472	SF3B1	O75533	1304 aa	Known RBP eCLIP	12.92	□□□□□ -0.34	3e-6	■■■■■ 137.9
SEPT9-238	ENST00000591472	LRRC10B	A6NIK2	292 aa		12.92	□□□□□ -0.34
SEPT9-238	ENST00000591472	GOLGA6L19	H0YKK7	550 aa		12.92	□□□□□ -0.34
SEPT9-238	ENST00000591472		H3BNC9	293 aa		12.92	□□□□□ -0.34
SEPT9-238	ENST00000591472	P4HA2	O15460	535 aa		12.92	□□□□□ -0.34
SEPT9-238	ENST00000591472	TRAPPC3	O43617	180 aa		12.92	□□□□□ -0.34
SEPT9-238	ENST00000591472	VNN1	O95497	513 aa		12.92	□□□□□ -0.34
SEPT9-238	ENST00000591472	HLA-DRA	P01903	254 aa		12.92	□□□□□ -0.34
SEPT9-238	ENST00000591472	ITGB1	P05556	798 aa		12.92	□□□□□ -0.34
SEPT9-238	ENST00000591472	TPM2	P07951	284 aa		12.92	□□□□□ -0.34
SEPT9-238	ENST00000591472	PRKCSH	P14314	528 aa	Predicted RBP	12.92	□□□□□ -0.34
SEPT9-238	ENST00000591472	CDK11B	P21127	795 aa	Known RBP	12.92	□□□□□ -0.34
SEPT9-238	ENST00000591472	ATIC	P31939	592 aa		12.92	□□□□□ -0.34
SEPT9-238	ENST00000591472	PIK3CA	P42336	1068 aa		12.92	□□□□□ -0.34
SEPT9-238	ENST00000591472	AARS	P49588	968 aa	Known RBP eCLIP	12.92	□□□□□ -0.34
SEPT9-238	ENST00000591472	TAF6	P49848	677 aa		12.92	□□□□□ -0.34
SEPT9-238	ENST00000591472	LILRA4	P59901	499 aa		12.92	□□□□□ -0.34
SEPT9-238	ENST00000591472	MYL7	Q01449	175 aa		12.92	□□□□□ -0.34
SEPT9-238	ENST00000591472	UBE3A	Q05086	875 aa		12.92	□□□□□ -0.34
SEPT9-238	ENST00000591472	ELAVL2	Q12926	359 aa	Known RBP	12.92	□□□□□ -0.34
SEPT9-238	ENST00000591472	MYO1E	Q12965	1108 aa		12.92	□□□□□ -0.34
SEPT9-238	ENST00000591472	NCOA4	Q13772	614 aa		12.92	□□□□□ -0.34
SEPT9-238	ENST00000591472	KRT31	Q15323	416 aa		12.92	□□□□□ -0.34
SEPT9-238	ENST00000591472	SV2C	Q496J9	727 aa		12.92	□□□□□ -0.34
SEPT9-238	ENST00000591472	CBWD6	Q4V339	395 aa		12.92	□□□□□ -0.34
SEPT9-238	ENST00000591472	CBWD3	Q5JTY5	395 aa		12.92	□□□□□ -0.34
SEPT9-238	ENST00000591472	CBWD5	Q5RIA9	395 aa		12.92	□□□□□ -0.34
SEPT9-238	ENST00000591472	FUT10	Q6P4F1	479 aa		12.92	□□□□□ -0.34
SEPT9-238	ENST00000591472	CD300LG	Q6UXG3	332 aa		12.92	□□□□□ -0.34
SEPT9-238	ENST00000591472	DDX53	Q86TM3	631 aa	Known RBP	12.92	□□□□□ -0.34
SEPT9-238	ENST00000591472	RNF214	Q8ND24	703 aa		12.92	□□□□□ -0.34
SEPT9-238	ENST00000591472	FBXL13	Q8NEE6	735 aa		12.92	□□□□□ -0.34
SEPT9-238	ENST00000591472	HASPIN	Q8TF76	798 aa		12.92	□□□□□ -0.34
SEPT9-238	ENST00000591472	ARNTL2	Q8WYA1	636 aa		12.92	□□□□□ -0.34
SEPT9-238	ENST00000591472	HPDL	Q96IR7	371 aa		12.92	□□□□□ -0.34
SEPT9-238	ENST00000591472	ZNF576	Q9H609	170 aa		12.92	□□□□□ -0.34
SEPT9-238	ENST00000591472	CERS4	Q9HA82	394 aa		12.92	□□□□□ -0.34
SEPT9-238	ENST00000591472	LIMA1	Q9UHB6	759 aa	Known RBP	12.92	□□□□□ -0.34
SEPT9-238	ENST00000591472	LZTS1	Q9Y250	596 aa		12.92	□□□□□ -0.34
SEPT9-238	ENST00000591472	PLXNA4	Q9HCM2	1894 aa		12.91	□□□□□ -0.34
SEPT9-238	ENST00000591472	STAU1	O95793	577 aa	Known RBP	12.91	□□□□□ -0.34
SEPT9-238	ENST00000591472	EFEMP2	O95967	443 aa		12.91	□□□□□ -0.34
SEPT9-238	ENST00000591472	CST3	P01034	146 aa	Predicted RBP	12.91	□□□□□ -0.34
SEPT9-238	ENST00000591472	IGFBP6	P24592	240 aa	Predicted RBP	12.91	□□□□□ -0.34
SEPT9-238	ENST00000591472	MYL6	P60660	151 aa		12.91	□□□□□ -0.34

Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms