RNA–Protein interactions for RNA: ENST00000591338.1

LINC00662-208, long intergenic non-protein coding RNA 662, human

TSL 2

Gene LINC00662, Length 436 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00662-208	ENST00000591338	C1orf127	Q8N9H9	656 aa		12.84	□□□□□ -0.35
LINC00662-208	ENST00000591338	RNF169	Q8NCN4	708 aa		12.84	□□□□□ -0.35
LINC00662-208	ENST00000591338	GSTCD	Q8NEC7	633 aa		12.84	□□□□□ -0.35
LINC00662-208	ENST00000591338	TATDN2	Q93075	761 aa		12.84	□□□□□ -0.35
LINC00662-208	ENST00000591338	VWCE	Q96DN2	955 aa		12.84	□□□□□ -0.35
LINC00662-208	ENST00000591338	GAD1	Q99259	594 aa		12.84	□□□□□ -0.35
LINC00662-208	ENST00000591338	PI4K2A	Q9BTU6	479 aa		12.84	□□□□□ -0.35
LINC00662-208	ENST00000591338	SLC4A5	Q9BY07	1137 aa		12.84	□□□□□ -0.35
LINC00662-208	ENST00000591338	UBE2T	Q9NPD8	197 aa	Predicted RBP	12.84	□□□□□ -0.35
LINC00662-208	ENST00000591338	UBN1	Q9NPG3	1134 aa		12.84	□□□□□ -0.35
LINC00662-208	ENST00000591338	NLRC4	Q9NPP4	1024 aa		12.84	□□□□□ -0.35
LINC00662-208	ENST00000591338	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	12.84	□□□□□ -0.35	6e-9	■■■■■ 134.6
LINC00662-208	ENST00000591338	MIOS	Q9NXC5	875 aa		12.84	□□□□□ -0.35
LINC00662-208	ENST00000591338	CEP72	Q9P209	647 aa		12.84	□□□□□ -0.35
LINC00662-208	ENST00000591338	APEX2	Q9UBZ4	518 aa		12.84	□□□□□ -0.35
LINC00662-208	ENST00000591338	FBXL5	Q9UKA1	691 aa		12.84	□□□□□ -0.35
LINC00662-208	ENST00000591338	DNAJC12	Q9UKB3	198 aa		12.84	□□□□□ -0.35
LINC00662-208	ENST00000591338	TANC1	Q9C0D5	1861 aa		12.84	□□□□□ -0.35
LINC00662-208	ENST00000591338	RALGAPA2	Q2PPJ7	1873 aa		12.83	□□□□□ -0.36
LINC00662-208	ENST00000591338	ARL5C	A6NH57	179 aa		12.83	□□□□□ -0.36
LINC00662-208	ENST00000591338	PTGES	O14684	152 aa		12.83	□□□□□ -0.36
LINC00662-208	ENST00000591338	MFAP3L	O75121	409 aa		12.83	□□□□□ -0.36
LINC00662-208	ENST00000591338	ZC3H11A	O75152	810 aa	Known RBP eCLIP	12.83	□□□□□ -0.36
LINC00662-208	ENST00000591338	IBSP	P21815	317 aa	Predicted RBP	12.83	□□□□□ -0.36
LINC00662-208	ENST00000591338	AFF1	P51825	1210 aa	Known RBP	12.83	□□□□□ -0.36
LINC00662-208	ENST00000591338	GUCY2F	P51841	1108 aa		12.83	□□□□□ -0.36
LINC00662-208	ENST00000591338	MYL6	P60660	151 aa		12.83	□□□□□ -0.36
LINC00662-208	ENST00000591338	ZBED6	P86452	979 aa		12.83	□□□□□ -0.36
LINC00662-208	ENST00000591338	TRPC3	Q13507	836 aa		12.83	□□□□□ -0.36
LINC00662-208	ENST00000591338	SGSM1	Q2NKQ1	1148 aa		12.83	□□□□□ -0.36
LINC00662-208	ENST00000591338	WDR44	Q5JSH3	913 aa		12.83	□□□□□ -0.36
LINC00662-208	ENST00000591338	GLRA4	Q5JXX5	417 aa		12.83	□□□□□ -0.36
LINC00662-208	ENST00000591338	IQCE	Q6IPM2	695 aa		12.83	□□□□□ -0.36
LINC00662-208	ENST00000591338	MFSD5	Q6N075	450 aa		12.83	□□□□□ -0.36
LINC00662-208	ENST00000591338	CACNA2D4	Q7Z3S7	1137 aa		12.83	□□□□□ -0.36
LINC00662-208	ENST00000591338	CNGA4	Q8IV77	575 aa		12.83	□□□□□ -0.36
LINC00662-208	ENST00000591338	ARHGEF19	Q8IW93	802 aa		12.83	□□□□□ -0.36
LINC00662-208	ENST00000591338	LRRC8A	Q8IWT6	810 aa		12.83	□□□□□ -0.36
LINC00662-208	ENST00000591338	ZNF397	Q8NF99	534 aa	Predicted RBP	12.83	□□□□□ -0.36
LINC00662-208	ENST00000591338	BEST2	Q8NFU1	509 aa		12.83	□□□□□ -0.36
LINC00662-208	ENST00000591338	OR8K1	Q8NGG5	319 aa		12.83	□□□□□ -0.36
LINC00662-208	ENST00000591338	CXorf38	Q8TB03	319 aa		12.83	□□□□□ -0.36
LINC00662-208	ENST00000591338	BAP1	Q92560	729 aa		12.83	□□□□□ -0.36
LINC00662-208	ENST00000591338	C18orf25	Q96B23	403 aa	Predicted RBP	12.83	□□□□□ -0.36
LINC00662-208	ENST00000591338	ELMO3	Q96BJ8	720 aa		12.83	□□□□□ -0.36
LINC00662-208	ENST00000591338	ZFP42	Q96MM3	310 aa		12.83	□□□□□ -0.36
LINC00662-208	ENST00000591338	NT5C1B	Q96P26	610 aa		12.83	□□□□□ -0.36
LINC00662-208	ENST00000591338	EPAS1	Q99814	870 aa		12.83	□□□□□ -0.36
LINC00662-208	ENST00000591338	NAA15	Q9BXJ9	866 aa	Known RBP	12.83	□□□□□ -0.36
LINC00662-208	ENST00000591338	ELAC1	Q9H777	363 aa	Known RBP	12.83	□□□□□ -0.36
LINC00662-208	ENST00000591338	SIX4	Q9UIU6	781 aa		12.83	□□□□□ -0.36
LINC00662-208	ENST00000591338	UBQLN1	Q9UMX0	589 aa	Known RBP	12.83	□□□□□ -0.36
LINC00662-208	ENST00000591338	VPS9D1	Q9Y2B5	631 aa		12.83	□□□□□ -0.36
LINC00662-208	ENST00000591338	FHOD1	Q9Y613	1164 aa		12.83	□□□□□ -0.36
LINC00662-208	ENST00000591338	PDCD11	Q14690	1871 aa	Known RBP	12.82	□□□□□ -0.36
LINC00662-208	ENST00000591338	XPOT	O43592	962 aa	Known RBP	12.82	□□□□□ -0.36
LINC00662-208	ENST00000591338	OFD1	O75665	1012 aa		12.82	□□□□□ -0.36
LINC00662-208	ENST00000591338	ITGB3	P05106	788 aa		12.82	□□□□□ -0.36
LINC00662-208	ENST00000591338	KRT19	P08727	400 aa		12.82	□□□□□ -0.36
LINC00662-208	ENST00000591338	CSF2RA	P15509	400 aa		12.82	□□□□□ -0.36
LINC00662-208	ENST00000591338	MLH1	P40692	756 aa		12.82	□□□□□ -0.36
LINC00662-208	ENST00000591338	RBP5	P82980	135 aa		12.82	□□□□□ -0.36
LINC00662-208	ENST00000591338	IKBKE	Q14164	716 aa		12.82	□□□□□ -0.36
LINC00662-208	ENST00000591338	SPOPL	Q6IQ16	392 aa		12.82	□□□□□ -0.36
LINC00662-208	ENST00000591338	CNKSR3	Q6P9H4	555 aa		12.82	□□□□□ -0.36
LINC00662-208	ENST00000591338	RRAGA	Q7L523	313 aa		12.82	□□□□□ -0.36
LINC00662-208	ENST00000591338	TMEM199	Q8N511	208 aa		12.82	□□□□□ -0.36
LINC00662-208	ENST00000591338	CCDC150	Q8NCX0	1101 aa		12.82	□□□□□ -0.36
LINC00662-208	ENST00000591338	HELQ	Q8TDG4	1101 aa		12.82	□□□□□ -0.36
LINC00662-208	ENST00000591338	ZNF830	Q96NB3	372 aa	Predicted RBP	12.82	□□□□□ -0.36
LINC00662-208	ENST00000591338	PPP1R10	Q96QC0	940 aa	Known RBP	12.82	□□□□□ -0.36
LINC00662-208	ENST00000591338	PANX2	Q96RD6	677 aa		12.82	□□□□□ -0.36
LINC00662-208	ENST00000591338	RSAD1	Q9HA92	442 aa		12.82	□□□□□ -0.36
LINC00662-208	ENST00000591338	TMEM161A	Q9NX61	479 aa		12.82	□□□□□ -0.36
LINC00662-208	ENST00000591338	TUBGCP4	Q9UGJ1	667 aa		12.82	□□□□□ -0.36
LINC00662-208	ENST00000591338	AJAP1	Q9UKB5	411 aa	Predicted RBP	12.82	□□□□□ -0.36
LINC00662-208	ENST00000591338	ITGA11	Q9UKX5	1188 aa		12.82	□□□□□ -0.36
LINC00662-208	ENST00000591338	AGAP1	Q9UPQ3	857 aa		12.82	□□□□□ -0.36
LINC00662-208	ENST00000591338	DAAM1	Q9Y4D1	1078 aa		12.82	□□□□□ -0.36
LINC00662-208	ENST00000591338	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	12.81	□□□□□ -0.36
LINC00662-208	ENST00000591338	ASS1	P00966	412 aa	Known RBP	12.81	□□□□□ -0.36
LINC00662-208	ENST00000591338	TH	P07101	528 aa		12.81	□□□□□ -0.36
LINC00662-208	ENST00000591338	CYP3A5	P20815	502 aa		12.81	□□□□□ -0.36
LINC00662-208	ENST00000591338	RFX1	P22670	979 aa		12.81	□□□□□ -0.36
LINC00662-208	ENST00000591338	POLR2B	P30876	1174 aa	Known RBP	12.81	□□□□□ -0.36
LINC00662-208	ENST00000591338	ATIC	P31939	592 aa		12.81	□□□□□ -0.36
LINC00662-208	ENST00000591338	RGS19	P49795	217 aa		12.81	□□□□□ -0.36
LINC00662-208	ENST00000591338	MLLT1	Q03111	559 aa	Predicted RBP	12.81	□□□□□ -0.36
LINC00662-208	ENST00000591338	SOX4	Q06945	474 aa	Predicted RBP	12.81	□□□□□ -0.36
LINC00662-208	ENST00000591338	DRAP1	Q14919	205 aa	Predicted RBP	12.81	□□□□□ -0.36
LINC00662-208	ENST00000591338	ARHGAP44	Q17R89	818 aa		12.81	□□□□□ -0.36
LINC00662-208	ENST00000591338	PDXDC1	Q6P996	788 aa		12.81	□□□□□ -0.36
LINC00662-208	ENST00000591338	RPUSD2	Q8IZ73	545 aa	Known RBP	12.81	□□□□□ -0.36
LINC00662-208	ENST00000591338	PPM1K	Q8N3J5	372 aa		12.81	□□□□□ -0.36
LINC00662-208	ENST00000591338	TAF4B	Q92750	862 aa		12.81	□□□□□ -0.36
LINC00662-208	ENST00000591338	RPS6KC1	Q96S38	1066 aa		12.81	□□□□□ -0.36
LINC00662-208	ENST00000591338	DNAJC7	Q99615	494 aa		12.81	□□□□□ -0.36
LINC00662-208	ENST00000591338	STK33	Q9BYT3	514 aa		12.81	□□□□□ -0.36
LINC00662-208	ENST00000591338	XYLT2	Q9H1B5	865 aa		12.81	□□□□□ -0.36
LINC00662-208	ENST00000591338	NUCKS1	Q9H1E3	243 aa	Known RBP	12.81	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms