RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 SMIM28A0A1B0GU29 152 aa19.03■□□□□ 0.64
RETREG3-210ENST00000590541 WNT7AO00755 349 aa19.03■□□□□ 0.64
RETREG3-210ENST00000590541 ZNF263O14978 683 aa19.03■□□□□ 0.64
RETREG3-210ENST00000590541 GJA1P17302 382 aa19.03■□□□□ 0.64
RETREG3-210ENST00000590541 KCNA4P22459 653 aa19.03■□□□□ 0.64
RETREG3-210ENST00000590541 MLLT6P55198 1093 aaPredicted RBP19.03■□□□□ 0.64
RETREG3-210ENST00000590541 CYP4A22Q5TCH4 519 aa19.03■□□□□ 0.64
RETREG3-210ENST00000590541 MFSD6LQ8IWD5 586 aa19.03■□□□□ 0.64
RETREG3-210ENST00000590541 DDX1Q92499 740 aaKnown RBP19.03■□□□□ 0.64
RETREG3-210ENST00000590541 ZSCAN31Q96LW9 406 aaPredicted RBP19.03■□□□□ 0.64
RETREG3-210ENST00000590541 LLPHQ9BRT6 129 aaKnown RBP19.03■□□□□ 0.64
RETREG3-210ENST00000590541 CEP72Q9P209 647 aa19.03■□□□□ 0.64
RETREG3-210ENST00000590541 RALGAPA1Q6GYQ0 2036 aa19.02■□□□□ 0.64
RETREG3-210ENST00000590541 TM4SF5O14894 197 aa19.02■□□□□ 0.64
RETREG3-210ENST00000590541 FOXD2O60548 495 aaPredicted RBP19.02■□□□□ 0.64
RETREG3-210ENST00000590541 HOXC13P31276 330 aa19.02■□□□□ 0.64
RETREG3-210ENST00000590541 NAMPTP43490 491 aa19.02■□□□□ 0.64
RETREG3-210ENST00000590541 MRPL58Q14197 206 aaKnown RBP19.02■□□□□ 0.64
RETREG3-210ENST00000590541 N4BP2L1Q5TBK1 243 aaPredicted RBP19.02■□□□□ 0.64
RETREG3-210ENST00000590541 NT5DC1Q5TFE4 455 aa19.02■□□□□ 0.64
RETREG3-210ENST00000590541 HEATR6Q6AI08 1181 aaKnown RBP19.02■□□□□ 0.64
RETREG3-210ENST00000590541 Q6ZS52 159 aa19.02■□□□□ 0.64
RETREG3-210ENST00000590541 CATSPER3Q86XQ3 398 aa19.02■□□□□ 0.64
RETREG3-210ENST00000590541 FAM160A2Q8N612 972 aaPredicted RBP19.02■□□□□ 0.64
RETREG3-210ENST00000590541 ZSCAN18Q8TBC5 510 aaPredicted RBP19.02■□□□□ 0.64
RETREG3-210ENST00000590541 MTMR9Q96QG7 549 aa19.02■□□□□ 0.64
RETREG3-210ENST00000590541 C2orf42Q9NWW7 574 aa19.02■□□□□ 0.64
RETREG3-210ENST00000590541 FBXL5Q9UKA1 691 aa19.02■□□□□ 0.64
RETREG3-210ENST00000590541 TRIP11Q15643 1979 aa19.02■□□□□ 0.64
RETREG3-210ENST00000590541 HEPACAM2A8MVW5 462 aa19.01■□□□□ 0.63
RETREG3-210ENST00000590541 SYN3O14994 580 aa19.01■□□□□ 0.63
RETREG3-210ENST00000590541 MED24O75448 989 aa19.01■□□□□ 0.63
RETREG3-210ENST00000590541 EPHA5P54756 1037 aa19.01■□□□□ 0.63
RETREG3-210ENST00000590541 LRRC32Q14392 662 aa19.01■□□□□ 0.63
RETREG3-210ENST00000590541 C8orf34Q49A92 452 aa19.01■□□□□ 0.63
RETREG3-210ENST00000590541 XKR4Q5GH76 650 aa19.01■□□□□ 0.63
RETREG3-210ENST00000590541 ATF7IP2Q5U623 682 aa19.01■□□□□ 0.63
RETREG3-210ENST00000590541 TPGS2Q68CL5 300 aa19.01■□□□□ 0.63
RETREG3-210ENST00000590541 IL31Q6EBC2 164 aa19.01■□□□□ 0.63
RETREG3-210ENST00000590541 IQCEQ6IPM2 695 aa19.01■□□□□ 0.63
RETREG3-210ENST00000590541 ALKAL1Q6UXT8 129 aa19.01■□□□□ 0.63
RETREG3-210ENST00000590541 CEP120Q8N960 986 aa19.01■□□□□ 0.63
RETREG3-210ENST00000590541 DEPTORQ8TB45 409 aa19.01■□□□□ 0.63
RETREG3-210ENST00000590541 RSPRY1Q96DX4 576 aa19.01■□□□□ 0.63
RETREG3-210ENST00000590541 ZNF512Q96ME7 567 aaPredicted RBP19.01■□□□□ 0.63
RETREG3-210ENST00000590541 KIFC3Q9BVG8 833 aa19.01■□□□□ 0.63
RETREG3-210ENST00000590541 SH2B1Q9NRF2 756 aaPredicted RBP19.01■□□□□ 0.63
RETREG3-210ENST00000590541 H7C4K7 107 aa19■□□□□ 0.63
RETREG3-210ENST00000590541 PODXLO00592 558 aa19■□□□□ 0.63
RETREG3-210ENST00000590541 NEMFO60524 1076 aa19■□□□□ 0.63
RETREG3-210ENST00000590541 MYL4P12829 197 aa19■□□□□ 0.63
RETREG3-210ENST00000590541 SOX9P48436 509 aa19■□□□□ 0.63
RETREG3-210ENST00000590541 LIMK1P53667 647 aa19■□□□□ 0.63
RETREG3-210ENST00000590541 SHC2P98077 582 aa19■□□□□ 0.63
RETREG3-210ENST00000590541 TWF1Q12792 350 aa19■□□□□ 0.63
RETREG3-210ENST00000590541 SAFBQ15424 915 aaKnown RBP eCLIP19■□□□□ 0.63
RETREG3-210ENST00000590541 TEAD2Q15562 447 aa19■□□□□ 0.63
RETREG3-210ENST00000590541 TXNDC11Q6PKC3 985 aa19■□□□□ 0.63
RETREG3-210ENST00000590541 ELMOD1Q8N336 334 aa19■□□□□ 0.63
RETREG3-210ENST00000590541 CSGALNACT1Q8TDX6 532 aa19■□□□□ 0.63
RETREG3-210ENST00000590541 MSANTD3Q96H12 275 aa19■□□□□ 0.63
RETREG3-210ENST00000590541 ZMAT2Q96NC0 199 aaKnown RBP19■□□□□ 0.63
RETREG3-210ENST00000590541 TUFT1Q9NNX1 390 aa19■□□□□ 0.63
RETREG3-210ENST00000590541 RXFP3Q9NSD7 469 aa19■□□□□ 0.63
RETREG3-210ENST00000590541 PDCD11Q14690 1871 aaKnown RBP18.99■□□□□ 0.63
RETREG3-210ENST00000590541 SLC38A8A6NNN8 435 aa18.99■□□□□ 0.63
RETREG3-210ENST00000590541 CYP11B2P19099 503 aa18.99■□□□□ 0.63
RETREG3-210ENST00000590541 HMGN5P82970 282 aaKnown RBP18.99■□□□□ 0.63
RETREG3-210ENST00000590541 SF3A2Q15428 464 aaKnown RBP18.99■□□□□ 0.63
RETREG3-210ENST00000590541 AASDHQ4L235 1098 aaPredicted RBP18.99■□□□□ 0.63
RETREG3-210ENST00000590541 CTXN3Q4LDR2 81 aa18.99■□□□□ 0.63
RETREG3-210ENST00000590541 PADI6Q6TGC4 694 aa18.99■□□□□ 0.63
RETREG3-210ENST00000590541 CEP68Q76N32 757 aa18.99■□□□□ 0.63
RETREG3-210ENST00000590541 DIS3L2Q8IYB7 885 aaKnown RBP18.99■□□□□ 0.63
RETREG3-210ENST00000590541 LEMD2Q8NC56 503 aa18.99■□□□□ 0.63
RETREG3-210ENST00000590541 NACC1Q96RE7 527 aa18.99■□□□□ 0.63
RETREG3-210ENST00000590541 C8orf33Q9H7E9 229 aaPredicted RBP18.99■□□□□ 0.63
RETREG3-210ENST00000590541 POLD4Q9HCU8 107 aa18.99■□□□□ 0.63
RETREG3-210ENST00000590541 DAXXQ9UER7 740 aaPredicted RBP18.99■□□□□ 0.63
RETREG3-210ENST00000590541 AFF4Q9UHB7 1163 aaKnown RBP18.99■□□□□ 0.63
RETREG3-210ENST00000590541 MYBPHLA2RUH7 354 aa18.98■□□□□ 0.63
RETREG3-210ENST00000590541 BTBD18B2RXH4 712 aa18.98■□□□□ 0.63
RETREG3-210ENST00000590541 CHADO15335 359 aa18.98■□□□□ 0.63
RETREG3-210ENST00000590541 JAK2O60674 1132 aa18.98■□□□□ 0.63
RETREG3-210ENST00000590541 HOXA6P31267 233 aa18.98■□□□□ 0.63
RETREG3-210ENST00000590541 GRM5P41594 1212 aa18.98■□□□□ 0.63
RETREG3-210ENST00000590541 FCHO2Q0JRZ9 810 aa18.98■□□□□ 0.63
RETREG3-210ENST00000590541 C1orf228Q6PIY5 440 aa18.98■□□□□ 0.63
RETREG3-210ENST00000590541 WDR5BQ86VZ2 330 aa18.98■□□□□ 0.63
RETREG3-210ENST00000590541 SHKBP1Q8TBC3 707 aa18.98■□□□□ 0.63
RETREG3-210ENST00000590541 E2F7Q96AV8 911 aa18.98■□□□□ 0.63
RETREG3-210ENST00000590541 LRRC3Q9BY71 257 aa18.98■□□□□ 0.63
RETREG3-210ENST00000590541 ARRDC1-AS1Q9H2J1 176 aa18.98■□□□□ 0.63
RETREG3-210ENST00000590541 TMEM60Q9H2L4 133 aa18.98■□□□□ 0.63
RETREG3-210ENST00000590541 ASAH2Q9NR71 780 aa18.98■□□□□ 0.63
RETREG3-210ENST00000590541 TNFSF13BQ9Y275 285 aa18.98■□□□□ 0.63
RETREG3-210ENST00000590541 CACNA1GO43497 2377 aa18.98■□□□□ 0.63
RETREG3-210ENST00000590541 SPECC1L-ADORA2AF8WAN1 911 aa18.97■□□□□ 0.63
RETREG3-210ENST00000590541 AXIN1O15169 862 aa18.97■□□□□ 0.63
RETREG3-210ENST00000590541 ZNF806P0C7X5 589 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms