RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 PDILTQ8N807 584 aa12.25□□□□□ -0.45
SMAD4-211ENST00000590499 SLC22A17Q8WUG5 538 aa12.25□□□□□ -0.45
SMAD4-211ENST00000590499 RABGGTAQ92696 567 aa12.25□□□□□ -0.45
SMAD4-211ENST00000590499 CCDC94Q9BW85 323 aaPredicted RBP12.25□□□□□ -0.45
SMAD4-211ENST00000590499 COLEC11Q9BWP8 271 aa12.25□□□□□ -0.45
SMAD4-211ENST00000590499 STRA6Q9BX79 667 aa12.25□□□□□ -0.45
SMAD4-211ENST00000590499 PANK2Q9BZ23 570 aa12.25□□□□□ -0.45
SMAD4-211ENST00000590499 GPR62Q9BZJ7 368 aa12.25□□□□□ -0.45
SMAD4-211ENST00000590499 CHST7Q9NS84 486 aa12.25□□□□□ -0.45
SMAD4-211ENST00000590499 KBTBD4Q9NVX7 518 aa12.25□□□□□ -0.45
SMAD4-211ENST00000590499 CNTN3Q9P232 1028 aa12.25□□□□□ -0.45
SMAD4-211ENST00000590499 ANKFY1Q9P2R3 1169 aa12.25□□□□□ -0.45
SMAD4-211ENST00000590499 RCOR1Q9UKL0 485 aa12.25□□□□□ -0.45
SMAD4-211ENST00000590499 ADAM28Q9UKQ2 775 aa12.25□□□□□ -0.45
SMAD4-211ENST00000590499 PCDHA7Q9UN72 937 aa12.25□□□□□ -0.45
SMAD4-211ENST00000590499 MTCL1Q9Y4B5 1905 aaKnown RBP12.25□□□□□ -0.45
SMAD4-211ENST00000590499 TMEM189-UBE2V1I3L0A0 370 aa12.24□□□□□ -0.45
SMAD4-211ENST00000590499 CLDN3O15551 220 aa12.24□□□□□ -0.45
SMAD4-211ENST00000590499 KIF4AO95239 1232 aa12.24□□□□□ -0.45
SMAD4-211ENST00000590499 CNPP09543 421 aaKnown RBP12.24□□□□□ -0.45
SMAD4-211ENST00000590499 HARSP12081 509 aaKnown RBP12.24□□□□□ -0.45
SMAD4-211ENST00000590499 ABCD1P33897 745 aa12.24□□□□□ -0.45
SMAD4-211ENST00000590499 OSTNP61366 133 aa12.24□□□□□ -0.45
SMAD4-211ENST00000590499 DSG1Q02413 1049 aa12.24□□□□□ -0.45
SMAD4-211ENST00000590499 ZP2Q05996 745 aa12.24□□□□□ -0.45
SMAD4-211ENST00000590499 SOX4Q06945 474 aaPredicted RBP12.24□□□□□ -0.45
SMAD4-211ENST00000590499 ZC2HC1CQ53FD0 456 aaPredicted RBP12.24□□□□□ -0.45
SMAD4-211ENST00000590499 ANKRD54Q6NXT1 300 aa12.24□□□□□ -0.45
SMAD4-211ENST00000590499 CD300LGQ6UXG3 332 aa12.24□□□□□ -0.45
SMAD4-211ENST00000590499 ZNF720Q7Z2F6 126 aa12.24□□□□□ -0.45
SMAD4-211ENST00000590499 GPR65Q8IYL9 337 aa12.24□□□□□ -0.45
SMAD4-211ENST00000590499 SUSD6Q92537 303 aa12.24□□□□□ -0.45
SMAD4-211ENST00000590499 CASP10Q92851 521 aa12.24□□□□□ -0.45
SMAD4-211ENST00000590499 CHAMP1Q96JM3 812 aa12.24□□□□□ -0.45
SMAD4-211ENST00000590499 ZMAT2Q96NC0 199 aaKnown RBP12.24□□□□□ -0.45
SMAD4-211ENST00000590499 ACAP3Q96P50 834 aa12.24□□□□□ -0.45
SMAD4-211ENST00000590499 TCHPQ9BT92 498 aa12.24□□□□□ -0.45
SMAD4-211ENST00000590499 S1PR5Q9H228 398 aa12.24□□□□□ -0.45
SMAD4-211ENST00000590499 TNMDQ9H2S6 317 aa12.24□□□□□ -0.45
SMAD4-211ENST00000590499 ZHX3Q9H4I2 956 aa12.24□□□□□ -0.45
SMAD4-211ENST00000590499 RXFP1Q9HBX9 757 aa12.24□□□□□ -0.45
SMAD4-211ENST00000590499 CD320Q9NPF0 282 aa12.24□□□□□ -0.45
SMAD4-211ENST00000590499 MRPL17Q9NRX2 175 aaKnown RBP12.24□□□□□ -0.45
SMAD4-211ENST00000590499 TOPORSQ9NS56 1045 aaPredicted RBP12.24□□□□□ -0.45
SMAD4-211ENST00000590499 SEL1LQ9UBV2 794 aa12.24□□□□□ -0.45
SMAD4-211ENST00000590499 CFAP45Q9UL16 551 aa12.24□□□□□ -0.45
SMAD4-211ENST00000590499 FAM50BQ9Y247 325 aa12.24□□□□□ -0.45
SMAD4-211ENST00000590499 SF3B1O75533 1304 aaKnown RBP eCLIP12.23□□□□□ -0.45
SMAD4-211ENST00000590499 A0A0B4J269 797 aa12.23□□□□□ -0.45
SMAD4-211ENST00000590499 HNRNPDLO14979 420 aaKnown RBP12.23□□□□□ -0.45
SMAD4-211ENST00000590499 URODP06132 367 aa12.23□□□□□ -0.45
SMAD4-211ENST00000590499 SRGAP2BP0DMP2 458 aa12.23□□□□□ -0.45
SMAD4-211ENST00000590499 GAP43P17677 238 aa12.23□□□□□ -0.45
SMAD4-211ENST00000590499 IGFBP6P24592 240 aaPredicted RBP12.23□□□□□ -0.45
SMAD4-211ENST00000590499 GLUD2P49448 558 aa12.23□□□□□ -0.45
SMAD4-211ENST00000590499 LIG4P49917 911 aa12.23□□□□□ -0.45
SMAD4-211ENST00000590499 YARSP54577 528 aaKnown RBP12.23□□□□□ -0.45
SMAD4-211ENST00000590499 UPP1Q16831 310 aa12.23□□□□□ -0.45
SMAD4-211ENST00000590499 SLC10A6Q3KNW5 377 aa12.23□□□□□ -0.45
SMAD4-211ENST00000590499 SEZ6Q53EL9 994 aa12.23□□□□□ -0.45
SMAD4-211ENST00000590499 RESP18Q5W5W9 173 aa12.23□□□□□ -0.45
SMAD4-211ENST00000590499 MRPL14Q6P1L8 145 aaKnown RBP12.23□□□□□ -0.45
SMAD4-211ENST00000590499 LLGL2Q6P1M3 1020 aa12.23□□□□□ -0.45
SMAD4-211ENST00000590499 CNNM4Q6P4Q7 775 aa12.23□□□□□ -0.45
SMAD4-211ENST00000590499 FAM174AQ8TBP5 190 aa12.23□□□□□ -0.45
SMAD4-211ENST00000590499 HVCN1Q96D96 273 aa12.23□□□□□ -0.45
SMAD4-211ENST00000590499 BICD1Q96G01 975 aa12.23□□□□□ -0.45
SMAD4-211ENST00000590499 KLHL5Q96PQ7 755 aa12.23□□□□□ -0.45
SMAD4-211ENST00000590499 CUEDC2Q9H467 287 aa12.23□□□□□ -0.45
SMAD4-211ENST00000590499 OLFML3Q9NRN5 406 aa12.23□□□□□ -0.45
SMAD4-211ENST00000590499 PRKAG3Q9UGI9 489 aa12.23□□□□□ -0.45
SMAD4-211ENST00000590499 USP15Q9Y4E8 981 aaPredicted RBP12.23□□□□□ -0.45
SMAD4-211ENST00000590499 DENND4AQ7Z401 1863 aa12.23□□□□□ -0.45
SMAD4-211ENST00000590499 C2orf16Q68DN1 1984 aa12.22□□□□□ -0.45
SMAD4-211ENST00000590499 TTC26A0AVF1 554 aa12.22□□□□□ -0.45
SMAD4-211ENST00000590499 SOBPA7XYQ1 873 aa12.22□□□□□ -0.45
SMAD4-211ENST00000590499 TISP43B9A030 160 aa12.22□□□□□ -0.45
SMAD4-211ENST00000590499 TEX28O15482 410 aa12.22□□□□□ -0.45
SMAD4-211ENST00000590499 ADRB2P07550 413 aa12.22□□□□□ -0.45
SMAD4-211ENST00000590499 CLTAP09496 248 aa12.22□□□□□ -0.45
SMAD4-211ENST00000590499 CXCL8P10145 99 aa12.22□□□□□ -0.45
SMAD4-211ENST00000590499 EPCAMP16422 314 aa12.22□□□□□ -0.45
SMAD4-211ENST00000590499 HOXB8P17481 243 aaPredicted RBP12.22□□□□□ -0.45
SMAD4-211ENST00000590499 CA8P35219 290 aa12.22□□□□□ -0.45
SMAD4-211ENST00000590499 TNFSF9P41273 254 aa12.22□□□□□ -0.45
SMAD4-211ENST00000590499 ME1P48163 572 aa12.22□□□□□ -0.45
SMAD4-211ENST00000590499 CLCN4P51793 760 aa12.22□□□□□ -0.45
SMAD4-211ENST00000590499 CLCNKBP51801 687 aa12.22□□□□□ -0.45
SMAD4-211ENST00000590499 CASP5P51878 434 aa12.22□□□□□ -0.45
SMAD4-211ENST00000590499 AGERQ15109 404 aa12.22□□□□□ -0.45
SMAD4-211ENST00000590499 USP41Q3LFD5 358 aa12.22□□□□□ -0.45
SMAD4-211ENST00000590499 RTP2Q5QGT7 225 aa12.22□□□□□ -0.45
SMAD4-211ENST00000590499 ZBTB41Q5SVQ8 909 aa12.22□□□□□ -0.45
SMAD4-211ENST00000590499 PPFIBP1Q86W92 1011 aa12.22□□□□□ -0.45
SMAD4-211ENST00000590499 ADHFE1Q8IWW8 467 aa12.22□□□□□ -0.45
SMAD4-211ENST00000590499 IQUBQ8NA54 791 aa12.22□□□□□ -0.45
SMAD4-211ENST00000590499 C3orf58Q8NDZ4 430 aa12.22□□□□□ -0.45
SMAD4-211ENST00000590499 HASPINQ8TF76 798 aa12.22□□□□□ -0.45
SMAD4-211ENST00000590499 LEO1Q8WVC0 666 aaPredicted RBP12.22□□□□□ -0.45
SMAD4-211ENST00000590499 STAMQ92783 540 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms