RNA–Protein interactions for RNA: ENST00000590301.1

NPC1-208, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 410 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-208ENST00000590301 ARID2Q68CP9 1835 aa8.28□□□□□ -1.08
NPC1-208ENST00000590301 ZDBF2Q9HCK1 2354 aa8.28□□□□□ -1.08
NPC1-208ENST00000590301 TECTAO75443 2155 aa8.28□□□□□ -1.08
NPC1-208ENST00000590301 NPHP3-ACAD11A0A0J9YXS1 232 aa8.27□□□□□ -1.09
NPC1-208ENST00000590301 PROB1E7EW31 1015 aa8.27□□□□□ -1.09
NPC1-208ENST00000590301 PRRG1O14668 218 aa8.27□□□□□ -1.09
NPC1-208ENST00000590301 ZNF197O14709 1029 aa8.27□□□□□ -1.09
NPC1-208ENST00000590301 CCL16O15467 120 aa8.27□□□□□ -1.09
NPC1-208ENST00000590301 LRG1P02750 347 aa8.27□□□□□ -1.09
NPC1-208ENST00000590301 CXCL8P10145 99 aa8.27□□□□□ -1.09
NPC1-208ENST00000590301 MYBP10242 640 aa8.27□□□□□ -1.09
NPC1-208ENST00000590301 RFX1P22670 979 aa8.27□□□□□ -1.09
NPC1-208ENST00000590301 MARCKSP29966 332 aaPredicted RBP8.27□□□□□ -1.09
NPC1-208ENST00000590301 MCM4P33991 863 aa8.27□□□□□ -1.09
NPC1-208ENST00000590301 BRCC3P46736 316 aa8.27□□□□□ -1.09
NPC1-208ENST00000590301 GTF2BQ00403 316 aa8.27□□□□□ -1.09
NPC1-208ENST00000590301 PFKPQ01813 784 aa8.27□□□□□ -1.09
NPC1-208ENST00000590301 ROR1Q01973 937 aa8.27□□□□□ -1.09
NPC1-208ENST00000590301 KARSQ15046 597 aaKnown RBP8.27□□□□□ -1.09
NPC1-208ENST00000590301 ZBTB6Q15916 424 aa8.27□□□□□ -1.09
NPC1-208ENST00000590301 CTXN3Q4LDR2 81 aa8.27□□□□□ -1.09
NPC1-208ENST00000590301 CWF19L1Q69YN2 538 aaKnown RBP8.27□□□□□ -1.09
NPC1-208ENST00000590301 SLFN12LQ6IEE8 588 aa8.27□□□□□ -1.09
NPC1-208ENST00000590301 RSPO2Q6UXX9 243 aaPredicted RBP8.27□□□□□ -1.09
NPC1-208ENST00000590301 SIX5Q8N196 739 aa8.27□□□□□ -1.09
NPC1-208ENST00000590301 EFCAB3Q8N7B9 438 aa8.27□□□□□ -1.09
NPC1-208ENST00000590301 TMEM105Q8N8V8 129 aa8.27□□□□□ -1.09
NPC1-208ENST00000590301 LEMD2Q8NC56 503 aa8.27□□□□□ -1.09
NPC1-208ENST00000590301 FLCNQ8NFG4 579 aa8.27□□□□□ -1.09
NPC1-208ENST00000590301 ATOH1Q92858 354 aaPredicted RBP8.27□□□□□ -1.09
NPC1-208ENST00000590301 FGF13Q92913 245 aa8.27□□□□□ -1.09
NPC1-208ENST00000590301 C18orf25Q96B23 403 aaPredicted RBP8.27□□□□□ -1.09
NPC1-208ENST00000590301 KIF12Q96FN5 646 aa8.27□□□□□ -1.09
NPC1-208ENST00000590301 SHDQ96IW2 340 aa8.27□□□□□ -1.09
NPC1-208ENST00000590301 ZBTB45Q96K62 511 aaPredicted RBP8.27□□□□□ -1.09
NPC1-208ENST00000590301 SMOC2Q9H3U7 446 aa8.27□□□□□ -1.09
NPC1-208ENST00000590301 ZSCAN16Q9H4T2 348 aaPredicted RBP8.27□□□□□ -1.09
NPC1-208ENST00000590301 RPF1Q9H9Y2 349 aaKnown RBP8.27□□□□□ -1.09
NPC1-208ENST00000590301 AFF4Q9UHB7 1163 aaKnown RBP8.27□□□□□ -1.09
NPC1-208ENST00000590301 FBXL5Q9UKA1 691 aa8.27□□□□□ -1.09
NPC1-208ENST00000590301 POLIQ9UNA4 740 aa8.27□□□□□ -1.09
NPC1-208ENST00000590301 DERAQ9Y315 318 aa8.27□□□□□ -1.09
NPC1-208ENST00000590301 MRPS23Q9Y3D9 190 aaKnown RBP8.27□□□□□ -1.09
NPC1-208ENST00000590301 SRPRBQ9Y5M8 271 aaKnown RBP8.27□□□□□ -1.09
NPC1-208ENST00000590301 NUMBLQ9Y6R0 609 aa8.27□□□□□ -1.09
NPC1-208ENST00000590301 ZFHX2Q9C0A1 2572 aaPredicted RBP8.26□□□□□ -1.09
NPC1-208ENST00000590301 OR6C75A6NL08 312 aa8.26□□□□□ -1.09
NPC1-208ENST00000590301 I3L4J1 428 aa8.26□□□□□ -1.09
NPC1-208ENST00000590301 M0QZQ0 153 aa8.26□□□□□ -1.09
NPC1-208ENST00000590301 MEFVO15553 781 aaPredicted RBP8.26□□□□□ -1.09
NPC1-208ENST00000590301 FAM189A1O60320 539 aa8.26□□□□□ -1.09
NPC1-208ENST00000590301 OAZ2O95190 189 aa8.26□□□□□ -1.09
NPC1-208ENST00000590301 CFHP08603 1231 aa8.26□□□□□ -1.09
NPC1-208ENST00000590301 NPR3P17342 541 aa8.26□□□□□ -1.09
NPC1-208ENST00000590301 GAP43P17677 238 aa8.26□□□□□ -1.09
NPC1-208ENST00000590301 PTPN2P17706 415 aa8.26□□□□□ -1.09
NPC1-208ENST00000590301 SYT1P21579 422 aa8.26□□□□□ -1.09
NPC1-208ENST00000590301 AARSP49588 968 aaKnown RBP eCLIP8.26□□□□□ -1.09
NPC1-208ENST00000590301 YWHAHQ04917 246 aaPredicted RBP8.26□□□□□ -1.09
NPC1-208ENST00000590301 RESTQ13127 1097 aa8.26□□□□□ -1.09
NPC1-208ENST00000590301 PLD1Q13393 1074 aa8.26□□□□□ -1.09
NPC1-208ENST00000590301 ALCAMQ13740 583 aa8.26□□□□□ -1.09
NPC1-208ENST00000590301 DHX8Q14562 1220 aaKnown RBP8.26□□□□□ -1.09
NPC1-208ENST00000590301 MCM6Q14566 821 aa8.26□□□□□ -1.09
NPC1-208ENST00000590301 POSTNQ15063 836 aa8.26□□□□□ -1.09
NPC1-208ENST00000590301 PTPAQ15257 358 aa8.26□□□□□ -1.09
NPC1-208ENST00000590301 ENOX2Q16206 610 aaKnown RBP8.26□□□□□ -1.09
NPC1-208ENST00000590301 RRAGBQ5VZM2 374 aa8.26□□□□□ -1.09
NPC1-208ENST00000590301 IQCEQ6IPM2 695 aa8.26□□□□□ -1.09
NPC1-208ENST00000590301 CCDC73Q6ZRK6 1079 aa8.26□□□□□ -1.09
NPC1-208ENST00000590301 USP37Q86T82 979 aa8.26□□□□□ -1.09
NPC1-208ENST00000590301 NPAS3Q8IXF0 933 aa8.26□□□□□ -1.09
NPC1-208ENST00000590301 CCDC105Q8IYK2 499 aa8.26□□□□□ -1.09
NPC1-208ENST00000590301 ELMOD1Q8N336 334 aa8.26□□□□□ -1.09
NPC1-208ENST00000590301 BEST2Q8NFU1 509 aa8.26□□□□□ -1.09
NPC1-208ENST00000590301 RSAD2Q8WXG1 361 aa8.26□□□□□ -1.09
NPC1-208ENST00000590301 DDX12PQ92771 950 aa8.26□□□□□ -1.09
NPC1-208ENST00000590301 MSTO1Q9BUK6 570 aa8.26□□□□□ -1.09
NPC1-208ENST00000590301 ZHX3Q9H4I2 956 aa8.26□□□□□ -1.09
NPC1-208ENST00000590301 ASB7Q9H672 318 aa8.26□□□□□ -1.09
NPC1-208ENST00000590301 CYP4F11Q9HBI6 524 aa8.26□□□□□ -1.09
NPC1-208ENST00000590301 ARHGEF3Q9NR81 526 aa8.26□□□□□ -1.09
NPC1-208ENST00000590301 DNMT3BQ9UBC3 853 aaKnown RBP8.26□□□□□ -1.09
NPC1-208ENST00000590301 TUBGCP4Q9UGJ1 667 aa8.26□□□□□ -1.09
NPC1-208ENST00000590301 FBXO2Q9UK22 296 aaPredicted RBP8.26□□□□□ -1.09
NPC1-208ENST00000590301 CPSF3Q9UKF6 684 aaKnown RBP8.26□□□□□ -1.09
NPC1-208ENST00000590301 EXOC7Q9UPT5 735 aa8.26□□□□□ -1.09
NPC1-208ENST00000590301 STYXL1Q9Y6J8 313 aa8.26□□□□□ -1.09
NPC1-208ENST00000590301 CACNA1HO95180 2353 aa8.26□□□□□ -1.09
NPC1-208ENST00000590301 WDR27A2RRH5 827 aa8.25□□□□□ -1.09
NPC1-208ENST00000590301 LACTBL1A8MY62 500 aa8.25□□□□□ -1.09
NPC1-208ENST00000590301 K7ELQ4 463 aaPredicted RBP8.25□□□□□ -1.09
NPC1-208ENST00000590301 NARSO43776 548 aaKnown RBP8.25□□□□□ -1.09
NPC1-208ENST00000590301 ECI2O75521 394 aa8.25□□□□□ -1.09
NPC1-208ENST00000590301 RHOP08100 348 aa8.25□□□□□ -1.09
NPC1-208ENST00000590301 ODC1P11926 461 aa8.25□□□□□ -1.09
NPC1-208ENST00000590301 TYMPP19971 482 aa8.25□□□□□ -1.09
NPC1-208ENST00000590301 IGFBP6P24592 240 aaPredicted RBP8.25□□□□□ -1.09
NPC1-208ENST00000590301 NBL1P41271 181 aa8.25□□□□□ -1.09
NPC1-208ENST00000590301 NTHL1P78549 312 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms