RNA–Protein interactions for RNA: ENST00000590215.1

MBD1-223, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5

Gene MBD1, Length 749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-223ENST00000590215 RBM43Q6ZSC3 357 aaKnown RBP20.27■□□□□ 0.84
MBD1-223ENST00000590215 PLEKHO2Q8TD55 490 aa20.27■□□□□ 0.84
MBD1-223ENST00000590215 PARD3BQ8TEW8 1205 aa20.27■□□□□ 0.84
MBD1-223ENST00000590215 AUTS2Q8WXX7 1259 aa20.27■□□□□ 0.84
MBD1-223ENST00000590215 PPM1EQ8WY54 764 aa20.27■□□□□ 0.84
MBD1-223ENST00000590215 PIK3R5Q8WYR1 880 aa20.27■□□□□ 0.84
MBD1-223ENST00000590215 SUSD3Q96L08 255 aa20.27■□□□□ 0.84
MBD1-223ENST00000590215 TLE6Q9H808 572 aa20.27■□□□□ 0.84
MBD1-223ENST00000590215 FRMD4BQ9Y2L6 1034 aa20.27■□□□□ 0.84
MBD1-223ENST00000590215 NUB1Q9Y5A7 615 aa20.27■□□□□ 0.84
MBD1-223ENST00000590215 PTPRJQ12913 1337 aa20.27■□□□□ 0.83
MBD1-223ENST00000590215 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.26■□□□□ 0.83
MBD1-223ENST00000590215 M0QZQ0 153 aa20.26■□□□□ 0.83
MBD1-223ENST00000590215 SYN3O14994 580 aa20.26■□□□□ 0.83
MBD1-223ENST00000590215 AKAP3O75969 853 aa20.26■□□□□ 0.83
MBD1-223ENST00000590215 NRIP1P48552 1158 aa20.26■□□□□ 0.83
MBD1-223ENST00000590215 LILRA4P59901 499 aa20.26■□□□□ 0.83
MBD1-223ENST00000590215 ENPEPQ07075 957 aa20.26■□□□□ 0.83
MBD1-223ENST00000590215 KCNC3Q14003 757 aa20.26■□□□□ 0.83
MBD1-223ENST00000590215 DUOXA2Q1HG44 320 aa20.26■□□□□ 0.83
MBD1-223ENST00000590215 RTP2Q5QGT7 225 aa20.26■□□□□ 0.83
MBD1-223ENST00000590215 ANKRD40Q6AI12 368 aa20.26■□□□□ 0.83
MBD1-223ENST00000590215 EFHBQ8N7U6 833 aa20.26■□□□□ 0.83
MBD1-223ENST00000590215 OR5B17Q8NGF7 314 aa20.26■□□□□ 0.83
MBD1-223ENST00000590215 TMC2Q8TDI7 906 aa20.26■□□□□ 0.83
MBD1-223ENST00000590215 PABPC5Q96DU9 382 aaKnown RBP20.26■□□□□ 0.83
MBD1-223ENST00000590215 FNBP1Q96RU3 617 aa20.26■□□□□ 0.83
MBD1-223ENST00000590215 CGRRF1Q99675 332 aa20.26■□□□□ 0.83
MBD1-223ENST00000590215 TSG101Q99816 390 aa20.26■□□□□ 0.83
MBD1-223ENST00000590215 MKNK1Q9BUB5 465 aa20.26■□□□□ 0.83
MBD1-223ENST00000590215 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.26■□□□□ 0.83
MBD1-223ENST00000590215 FNIP2Q9P278 1114 aa20.26■□□□□ 0.83
MBD1-223ENST00000590215 ITGA11Q9UKX5 1188 aa20.26■□□□□ 0.83
MBD1-223ENST00000590215 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.25■□□□□ 0.83
MBD1-223ENST00000590215 PER2O15055 1255 aa20.25■□□□□ 0.83
MBD1-223ENST00000590215 TMEM191BP0C7N4 346 aa20.25■□□□□ 0.83
MBD1-223ENST00000590215 GTF2F1P35269 517 aaKnown RBP eCLIP20.25■□□□□ 0.831e-8■■■□□ 15.2
MBD1-223ENST00000590215 FKBP3Q00688 224 aaKnown RBP20.25■□□□□ 0.83
MBD1-223ENST00000590215 ADAM15Q13444 863 aa20.25■□□□□ 0.83
MBD1-223ENST00000590215 KIAA1841Q6NSI8 718 aa20.25■□□□□ 0.83
MBD1-223ENST00000590215 PDXDC1Q6P996 788 aa20.25■□□□□ 0.83
MBD1-223ENST00000590215 TMEM184AQ6ZMB5 413 aa20.25■□□□□ 0.83
MBD1-223ENST00000590215 RBM23Q86U06 439 aaKnown RBP20.25■□□□□ 0.83
MBD1-223ENST00000590215 LNX1Q8TBB1 728 aaPredicted RBP20.25■□□□□ 0.83
MBD1-223ENST00000590215 RIN2Q8WYP3 895 aaPredicted RBP20.25■□□□□ 0.83
MBD1-223ENST00000590215 CCDC127Q96BQ5 260 aa20.25■□□□□ 0.83
MBD1-223ENST00000590215 ANKRD36BP1Q96IX9 119 aa20.25■□□□□ 0.83
MBD1-223ENST00000590215 B3GALT6Q96L58 329 aa20.25■□□□□ 0.83
MBD1-223ENST00000590215 KLHL5Q96PQ7 755 aa20.25■□□□□ 0.83
MBD1-223ENST00000590215 MTMR12Q9C0I1 747 aa20.25■□□□□ 0.83
MBD1-223ENST00000590215 SIX4Q9UIU6 781 aa20.25■□□□□ 0.83
MBD1-223ENST00000590215 VWA8A3KMH1 1905 aa20.25■□□□□ 0.83
MBD1-223ENST00000590215 I3L4J1 428 aa20.24■□□□□ 0.83
MBD1-223ENST00000590215 CETN3O15182 167 aa20.24■□□□□ 0.83
MBD1-223ENST00000590215 CLASP2O75122 1294 aaKnown RBP20.24■□□□□ 0.83
MBD1-223ENST00000590215 C1RP00736 705 aa20.24■□□□□ 0.83
MBD1-223ENST00000590215 CNPP09543 421 aaKnown RBP20.24■□□□□ 0.83
MBD1-223ENST00000590215 DLATP10515 647 aaKnown RBP20.24■□□□□ 0.83
MBD1-223ENST00000590215 TKTP29401 623 aaKnown RBP20.24■□□□□ 0.83
MBD1-223ENST00000590215 PSMC2P35998 433 aaKnown RBP20.24■□□□□ 0.83
MBD1-223ENST00000590215 AP3M2P53677 418 aa20.24■□□□□ 0.83
MBD1-223ENST00000590215 CREMQ03060 361 aa20.24■□□□□ 0.83
MBD1-223ENST00000590215 MRPL58Q14197 206 aaKnown RBP20.24■□□□□ 0.83
MBD1-223ENST00000590215 CEP135Q66GS9 1140 aa20.24■□□□□ 0.83
MBD1-223ENST00000590215 LMBRD2Q68DH5 695 aaPredicted RBP20.24■□□□□ 0.83
MBD1-223ENST00000590215 TTI2Q6NXR4 508 aa20.24■□□□□ 0.83
MBD1-223ENST00000590215 INTS8Q75QN2 995 aaKnown RBP20.24■□□□□ 0.83
MBD1-223ENST00000590215 LRRC52Q8N7C0 313 aa20.24■□□□□ 0.83
MBD1-223ENST00000590215 ZNF516Q92618 1163 aa20.24■□□□□ 0.83
MBD1-223ENST00000590215 BORCS6Q96GS4 357 aa20.24■□□□□ 0.83
MBD1-223ENST00000590215 FAM84AQ96KN4 292 aa20.24■□□□□ 0.83
MBD1-223ENST00000590215 POP1Q99575 1024 aaKnown RBP20.24■□□□□ 0.83
MBD1-223ENST00000590215 EMILIN2Q9BXX0 1053 aa20.24■□□□□ 0.83
MBD1-223ENST00000590215 COG5Q9UP83 839 aa20.24■□□□□ 0.83
MBD1-223ENST00000590215 SCN1AP35498 2009 aa20.24■□□□□ 0.83
MBD1-223ENST00000590215 TRIM49BA6NDI0 452 aa20.23■□□□□ 0.83
MBD1-223ENST00000590215 LRRIQ3A6PVS8 624 aaPredicted RBP20.23■□□□□ 0.83
MBD1-223ENST00000590215 C2CD2LO14523 706 aa20.23■□□□□ 0.83
MBD1-223ENST00000590215 IKBKBO14920 756 aa20.23■□□□□ 0.83
MBD1-223ENST00000590215 SPTLC1O15269 473 aa20.23■□□□□ 0.83
MBD1-223ENST00000590215 SLC16A3O15427 465 aaKnown RBP20.23■□□□□ 0.83
MBD1-223ENST00000590215 TNNC2P02585 160 aa20.23■□□□□ 0.83
MBD1-223ENST00000590215 ITGB3P05106 788 aa20.23■□□□□ 0.83
MBD1-223ENST00000590215 TNNI1P19237 187 aa20.23■□□□□ 0.83
MBD1-223ENST00000590215 PNPLA4P41247 253 aa20.23■□□□□ 0.83
MBD1-223ENST00000590215 TAF6P49848 677 aa20.23■□□□□ 0.83
MBD1-223ENST00000590215 RBP5P82980 135 aa20.23■□□□□ 0.83
MBD1-223ENST00000590215 SCARA3Q6AZY7 606 aa20.23■□□□□ 0.83
MBD1-223ENST00000590215 TRAPPC11Q7Z392 1133 aa20.23■□□□□ 0.83
MBD1-223ENST00000590215 CEP57Q86XR8 500 aa20.23■□□□□ 0.83
MBD1-223ENST00000590215 FAM186BQ8IYM0 893 aa20.23■□□□□ 0.83
MBD1-223ENST00000590215 CSGALNACT2Q8N6G5 542 aa20.23■□□□□ 0.83
MBD1-223ENST00000590215 MLKLQ8NB16 471 aa20.23■□□□□ 0.83
MBD1-223ENST00000590215 NELFBQ8WX92 580 aa20.23■□□□□ 0.83
MBD1-223ENST00000590215 HLA-CQ95604 372 aa20.23■□□□□ 0.83
MBD1-223ENST00000590215 DUSP9Q99956 384 aaKnown RBP20.23■□□□□ 0.83
MBD1-223ENST00000590215 IGFLR1Q9H665 355 aa20.23■□□□□ 0.83
MBD1-223ENST00000590215 MTRRQ9UBK8 725 aa20.23■□□□□ 0.83
MBD1-223ENST00000590215 PCDHB8Q9UN66 801 aa20.23■□□□□ 0.83
MBD1-223ENST00000590215 BACE2Q9Y5Z0 518 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms