RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 CCDC113Q9H0I3 377 aa14.08□□□□□ -0.16
PRKCSH-210ENST00000589990 POLR3BQ9NW08 1133 aaPredicted RBP14.08□□□□□ -0.16
PRKCSH-210ENST00000589990 ZMIZ1Q9ULJ6 1067 aa14.08□□□□□ -0.16
PRKCSH-210ENST00000589990 EML5Q05BV3 1969 aa14.08□□□□□ -0.16
PRKCSH-210ENST00000589990 ITPR1Q14643 2758 aa14.07□□□□□ -0.16
PRKCSH-210ENST00000589990 GIPC1O14908 333 aa14.07□□□□□ -0.16
PRKCSH-210ENST00000589990 EXTL3O43909 919 aa14.07□□□□□ -0.16
PRKCSH-210ENST00000589990 KCNK5O95279 499 aa14.07□□□□□ -0.16
PRKCSH-210ENST00000589990 PAPSS2O95340 614 aaPredicted RBP14.07□□□□□ -0.16
PRKCSH-210ENST00000589990 TOP3BO95985 862 aaKnown RBP14.07□□□□□ -0.16
PRKCSH-210ENST00000589990 ATF2P15336 505 aa14.07□□□□□ -0.16
PRKCSH-210ENST00000589990 GCFC2P16383 781 aaKnown RBP14.07□□□□□ -0.16
PRKCSH-210ENST00000589990 ELF1P32519 619 aa14.07□□□□□ -0.16
PRKCSH-210ENST00000589990 PRPF4BQ13523 1007 aaKnown RBP14.07□□□□□ -0.16
PRKCSH-210ENST00000589990 TMEM132AQ24JP5 1023 aa14.07□□□□□ -0.16
PRKCSH-210ENST00000589990 TCEAL6Q6IPX3 200 aa14.07□□□□□ -0.16
PRKCSH-210ENST00000589990 GALNT17Q6IS24 598 aa14.07□□□□□ -0.16
PRKCSH-210ENST00000589990 KBTBD6Q86V97 674 aa14.07□□□□□ -0.16
PRKCSH-210ENST00000589990 MFSD6LQ8IWD5 586 aa14.07□□□□□ -0.16
PRKCSH-210ENST00000589990 SHKBP1Q8TBC3 707 aa14.07□□□□□ -0.16
PRKCSH-210ENST00000589990 DDX1Q92499 740 aaKnown RBP14.07□□□□□ -0.16
PRKCSH-210ENST00000589990 TCEAL3Q969E4 200 aa14.07□□□□□ -0.16
PRKCSH-210ENST00000589990 PRIMPOLQ96LW4 560 aa14.07□□□□□ -0.16
PRKCSH-210ENST00000589990 ZNF197O14709 1029 aa14.06□□□□□ -0.16
PRKCSH-210ENST00000589990 MICAL2O94851 1124 aa14.06□□□□□ -0.16
PRKCSH-210ENST00000589990 ZNF806P0C7X5 589 aa14.06□□□□□ -0.16
PRKCSH-210ENST00000589990 CNR2P34972 360 aa14.06□□□□□ -0.16
PRKCSH-210ENST00000589990 RBM25P49756 843 aaKnown RBP14.06□□□□□ -0.16
PRKCSH-210ENST00000589990 TWF1Q12792 350 aa14.06□□□□□ -0.16
PRKCSH-210ENST00000589990 NR5A1Q13285 461 aa14.06□□□□□ -0.16
PRKCSH-210ENST00000589990 PON2Q15165 354 aa14.06□□□□□ -0.16
PRKCSH-210ENST00000589990 NT5DC1Q5TFE4 455 aa14.06□□□□□ -0.16
PRKCSH-210ENST00000589990 ERICH6BQ5W0A0 696 aa14.06□□□□□ -0.16
PRKCSH-210ENST00000589990 PSAPL1Q6NUJ1 521 aa14.06□□□□□ -0.16
PRKCSH-210ENST00000589990 WDR5BQ86VZ2 330 aa14.06□□□□□ -0.16
PRKCSH-210ENST00000589990 DEPDC1BQ8WUY9 529 aa14.06□□□□□ -0.16
PRKCSH-210ENST00000589990 ZMAT2Q96NC0 199 aaKnown RBP14.06□□□□□ -0.16
PRKCSH-210ENST00000589990 TRPV4Q9HBA0 871 aa14.06□□□□□ -0.16
PRKCSH-210ENST00000589990 GTSE1Q9NYZ3 720 aa14.06□□□□□ -0.16
PRKCSH-210ENST00000589990 FBXL5Q9UKA1 691 aa14.06□□□□□ -0.16
PRKCSH-210ENST00000589990 DMXL2Q8TDJ6 3036 aa14.06□□□□□ -0.16
PRKCSH-210ENST00000589990 ATG2BQ96BY7 2078 aa14.05□□□□□ -0.16
PRKCSH-210ENST00000589990 SMIM28A0A1B0GU29 152 aa14.05□□□□□ -0.16
PRKCSH-210ENST00000589990 SPECC1L-ADORA2AF8WAN1 911 aa14.05□□□□□ -0.16
PRKCSH-210ENST00000589990 CPLX1O14810 134 aa14.05□□□□□ -0.16
PRKCSH-210ENST00000589990 MEFVO15553 781 aaPredicted RBP14.05□□□□□ -0.16
PRKCSH-210ENST00000589990 CDC45O75419 566 aa14.05□□□□□ -0.16
PRKCSH-210ENST00000589990 VNN2O95498 520 aa14.05□□□□□ -0.16
PRKCSH-210ENST00000589990 SPATA31C1P0DKV0 1188 aa14.05□□□□□ -0.16
PRKCSH-210ENST00000589990 CTHP32929 405 aa14.05□□□□□ -0.16
PRKCSH-210ENST00000589990 KPNA1P52294 538 aaPredicted RBP14.05□□□□□ -0.16
PRKCSH-210ENST00000589990 EPHA5P54756 1037 aa14.05□□□□□ -0.16
PRKCSH-210ENST00000589990 CYP4A22Q5TCH4 519 aa14.05□□□□□ -0.16
PRKCSH-210ENST00000589990 UNQ6494/PRO21346Q6UXR6 183 aa14.05□□□□□ -0.16
PRKCSH-210ENST00000589990 ZBTB8OSQ8IWT0 167 aa14.05□□□□□ -0.16
PRKCSH-210ENST00000589990 C12orf50Q8NA57 414 aaPredicted RBP14.05□□□□□ -0.16
PRKCSH-210ENST00000589990 CSGALNACT1Q8TDX6 532 aa14.05□□□□□ -0.16
PRKCSH-210ENST00000589990 CCDC43Q96MW1 224 aaKnown RBP14.05□□□□□ -0.16
PRKCSH-210ENST00000589990 LSM14BQ9BX40 385 aaKnown RBP14.05□□□□□ -0.16
PRKCSH-210ENST00000589990 LRRC3Q9BY71 257 aa14.05□□□□□ -0.16
PRKCSH-210ENST00000589990 CRISPLD1Q9H336 500 aa14.05□□□□□ -0.16
PRKCSH-210ENST00000589990 PCDHA12Q9UN75 941 aa14.05□□□□□ -0.16
PRKCSH-210ENST00000589990 A0A1W2PRU2 124 aa14.04□□□□□ -0.16
PRKCSH-210ENST00000589990 MYBPHLA2RUH7 354 aa14.04□□□□□ -0.16
PRKCSH-210ENST00000589990 ACKR2O00590 384 aa14.04□□□□□ -0.16
PRKCSH-210ENST00000589990 PODXLO00592 558 aa14.04□□□□□ -0.16
PRKCSH-210ENST00000589990 EPN2O95208 641 aa14.04□□□□□ -0.16
PRKCSH-210ENST00000589990 ATP2B1P20020 1258 aa14.04□□□□□ -0.16
PRKCSH-210ENST00000589990 RAP1GAPP47736 663 aa14.04□□□□□ -0.16
PRKCSH-210ENST00000589990 OSTNP61366 133 aa14.04□□□□□ -0.16
PRKCSH-210ENST00000589990 TNK2Q07912 1038 aa14.04□□□□□ -0.16
PRKCSH-210ENST00000589990 CCINQ13939 588 aa14.04□□□□□ -0.16
PRKCSH-210ENST00000589990 MRPL58Q14197 206 aaKnown RBP14.04□□□□□ -0.16
PRKCSH-210ENST00000589990 LRRC32Q14392 662 aa14.04□□□□□ -0.16
PRKCSH-210ENST00000589990 MAPK6Q16659 721 aa14.04□□□□□ -0.16
PRKCSH-210ENST00000589990 PLA2G2CQ5R387 149 aa14.04□□□□□ -0.16
PRKCSH-210ENST00000589990 RNF19BQ6ZMZ0 732 aa14.04□□□□□ -0.16
PRKCSH-210ENST00000589990 SLFN12Q8IYM2 578 aa14.04□□□□□ -0.16
PRKCSH-210ENST00000589990 C18orf25Q96B23 403 aaPredicted RBP14.04□□□□□ -0.16
PRKCSH-210ENST00000589990 ZNF512Q96ME7 567 aaPredicted RBP14.04□□□□□ -0.16
PRKCSH-210ENST00000589990 ADPGKQ9BRR6 497 aa14.04□□□□□ -0.16
PRKCSH-210ENST00000589990 MKNK1Q9BUB5 465 aa14.04□□□□□ -0.16
PRKCSH-210ENST00000589990 TMEM121BQ9BXQ6 578 aaPredicted RBP14.04□□□□□ -0.16
PRKCSH-210ENST00000589990 SLITRK6Q9H5Y7 841 aa14.04□□□□□ -0.16
PRKCSH-210ENST00000589990 TTC12Q9H892 705 aaPredicted RBP14.04□□□□□ -0.16
PRKCSH-210ENST00000589990 PPP4R2Q9NY27 417 aa14.04□□□□□ -0.16
PRKCSH-210ENST00000589990 SETXQ7Z333 2677 aaKnown RBP14.03□□□□□ -0.16
PRKCSH-210ENST00000589990 CHADO15335 359 aa14.03□□□□□ -0.16
PRKCSH-210ENST00000589990 TRAPPC3O43617 180 aa14.03□□□□□ -0.16
PRKCSH-210ENST00000589990 MED24O75448 989 aa14.03□□□□□ -0.16
PRKCSH-210ENST00000589990 BAG4O95429 457 aaKnown RBP14.03□□□□□ -0.16
PRKCSH-210ENST00000589990 TXKP42681 527 aa14.03□□□□□ -0.16
PRKCSH-210ENST00000589990 FCHO2Q0JRZ9 810 aa14.03□□□□□ -0.16
PRKCSH-210ENST00000589990 CTXN3Q4LDR2 81 aa14.03□□□□□ -0.16
PRKCSH-210ENST00000589990 IQCEQ6IPM2 695 aa14.03□□□□□ -0.16
PRKCSH-210ENST00000589990 TMC8Q8IU68 726 aa14.03□□□□□ -0.16
PRKCSH-210ENST00000589990 GAB3Q8WWW8 586 aa14.03□□□□□ -0.16
PRKCSH-210ENST00000589990 TNFRSF25Q93038 417 aa14.03□□□□□ -0.16
PRKCSH-210ENST00000589990 UROC1Q96N76 676 aa14.03□□□□□ -0.16
PRKCSH-210ENST00000589990 DNAJC25Q9H1X3 360 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms