RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 GTPBP10A4D1E9 387 aaKnown RBP16.35■□□□□ 0.21
ATG4D-211ENST00000589753 LCHNA4D1U4 455 aa16.35■□□□□ 0.21
ATG4D-211ENST00000589753 CARNS1A5YM72 827 aa16.35■□□□□ 0.21
ATG4D-211ENST00000589753 GOLGA6L3A6NEY3 463 aa16.35■□□□□ 0.21
ATG4D-211ENST00000589753 NRP1O14786 923 aa16.35■□□□□ 0.21
ATG4D-211ENST00000589753 PPEF2O14830 753 aa16.35■□□□□ 0.21
ATG4D-211ENST00000589753 GALTP07902 379 aa16.35■□□□□ 0.21
ATG4D-211ENST00000589753 ATICP31939 592 aa16.35■□□□□ 0.21
ATG4D-211ENST00000589753 SLC11A1P49279 550 aa16.35■□□□□ 0.21
ATG4D-211ENST00000589753 ALDH7A1P49419 539 aaKnown RBP16.35■□□□□ 0.21
ATG4D-211ENST00000589753 BCAR1P56945 870 aa16.35■□□□□ 0.21
ATG4D-211ENST00000589753 MYL6P60660 151 aa16.35■□□□□ 0.21
ATG4D-211ENST00000589753 UBXN1Q04323 297 aa16.35■□□□□ 0.21
ATG4D-211ENST00000589753 MYO1EQ12965 1108 aa16.35■□□□□ 0.21
ATG4D-211ENST00000589753 SGSM1Q2NKQ1 1148 aa16.35■□□□□ 0.21
ATG4D-211ENST00000589753 EPC2Q52LR7 807 aa16.35■□□□□ 0.21
ATG4D-211ENST00000589753 DCLRE1AQ6PJP8 1040 aa16.35■□□□□ 0.21
ATG4D-211ENST00000589753 GBP6Q6ZN66 633 aa16.35■□□□□ 0.21
ATG4D-211ENST00000589753 LRRC52Q8N7C0 313 aa16.35■□□□□ 0.21
ATG4D-211ENST00000589753 CCDC150Q8NCX0 1101 aa16.35■□□□□ 0.21
ATG4D-211ENST00000589753 SEMA4DQ92854 862 aa16.35■□□□□ 0.21
ATG4D-211ENST00000589753 ZNF560Q96MR9 790 aa16.35■□□□□ 0.21
ATG4D-211ENST00000589753 ZNF558Q96NG5 402 aa16.35■□□□□ 0.21
ATG4D-211ENST00000589753 COLEC11Q9BWP8 271 aa16.35■□□□□ 0.21
ATG4D-211ENST00000589753 IMPG2Q9BZV3 1241 aa16.35■□□□□ 0.21
ATG4D-211ENST00000589753 AAASQ9NRG9 546 aa16.35■□□□□ 0.21
ATG4D-211ENST00000589753 PRG3Q9Y2Y8 225 aaPredicted RBP16.35■□□□□ 0.21
ATG4D-211ENST00000589753 CBFA2T2O43439 604 aa16.34■□□□□ 0.21
ATG4D-211ENST00000589753 B3GAT3O94766 335 aa16.34■□□□□ 0.21
ATG4D-211ENST00000589753 CLSTN1O94985 981 aa16.34■□□□□ 0.21
ATG4D-211ENST00000589753 MYOGP15173 224 aa16.34■□□□□ 0.21
ATG4D-211ENST00000589753 PNPLA4P41247 253 aa16.34■□□□□ 0.21
ATG4D-211ENST00000589753 TAF6P49848 677 aa16.34■□□□□ 0.21
ATG4D-211ENST00000589753 NR1I3Q14994 352 aa16.34■□□□□ 0.21
ATG4D-211ENST00000589753 RAB30Q15771 203 aa16.34■□□□□ 0.21
ATG4D-211ENST00000589753 EXOC3L4Q17RC7 722 aa16.34■□□□□ 0.21
ATG4D-211ENST00000589753 SARM1Q6SZW1 724 aa16.34■□□□□ 0.21
ATG4D-211ENST00000589753 KCNT2Q6UVM3 1135 aa16.34■□□□□ 0.21
ATG4D-211ENST00000589753 COLGALT1Q8NBJ5 622 aa16.34■□□□□ 0.21
ATG4D-211ENST00000589753 EHBP1Q8NDI1 1231 aa16.34■□□□□ 0.21
ATG4D-211ENST00000589753 CLP1Q92989 425 aaKnown RBP16.34■□□□□ 0.21
ATG4D-211ENST00000589753 HPDLQ96IR7 371 aa16.34■□□□□ 0.21
ATG4D-211ENST00000589753 CRACR2AQ9BSW2 395 aa16.34■□□□□ 0.21
ATG4D-211ENST00000589753 PBX4Q9BYU1 374 aa16.34■□□□□ 0.21
ATG4D-211ENST00000589753 GCNT4Q9P109 453 aa16.34■□□□□ 0.21
ATG4D-211ENST00000589753 MSRAQ9UJ68 235 aa16.34■□□□□ 0.21
ATG4D-211ENST00000589753 A0A1W2PPC1 479 aa16.33■□□□□ 0.2
ATG4D-211ENST00000589753 LINC01553A4QN01 128 aa16.33■□□□□ 0.2
ATG4D-211ENST00000589753 NT5C1B-RDH14C9J2C7 533 aa16.33■□□□□ 0.2
ATG4D-211ENST00000589753 TMEM189-UBE2V1I3L0A0 370 aa16.33■□□□□ 0.2
ATG4D-211ENST00000589753 TEX33O43247 280 aa16.33■□□□□ 0.2
ATG4D-211ENST00000589753 KIF4AO95239 1232 aa16.33■□□□□ 0.2
ATG4D-211ENST00000589753 STAU1O95793 577 aaKnown RBP16.33■□□□□ 0.2
ATG4D-211ENST00000589753 TPM3P06753 285 aa16.33■□□□□ 0.2
ATG4D-211ENST00000589753 CA3P07451 260 aa16.33■□□□□ 0.2
ATG4D-211ENST00000589753 PBX2P40425 430 aa16.33■□□□□ 0.2
ATG4D-211ENST00000589753 PBX3P40426 434 aa16.33■□□□□ 0.2
ATG4D-211ENST00000589753 ZNF699Q32M78 642 aa16.33■□□□□ 0.2
ATG4D-211ENST00000589753 SV2CQ496J9 727 aa16.33■□□□□ 0.2
ATG4D-211ENST00000589753 WDR44Q5JSH3 913 aa16.33■□□□□ 0.2
ATG4D-211ENST00000589753 C3orf58Q8NDZ4 430 aa16.33■□□□□ 0.2
ATG4D-211ENST00000589753 TAF4BQ92750 862 aa16.33■□□□□ 0.2
ATG4D-211ENST00000589753 PI4K2AQ9BTU6 479 aa16.33■□□□□ 0.2
ATG4D-211ENST00000589753 XPO4Q9C0E2 1151 aaKnown RBP16.33■□□□□ 0.2
ATG4D-211ENST00000589753 INTS2Q9H0H0 1204 aaKnown RBP16.33■□□□□ 0.2
ATG4D-211ENST00000589753 XYLT2Q9H1B5 865 aa16.33■□□□□ 0.2
ATG4D-211ENST00000589753 YBX2Q9Y2T7 364 aaKnown RBP16.33■□□□□ 0.2
ATG4D-211ENST00000589753 RWDD3Q9Y3V2 267 aa16.33■□□□□ 0.2
ATG4D-211ENST00000589753 NUB1Q9Y5A7 615 aa16.33■□□□□ 0.2
ATG4D-211ENST00000589753 PCDHB12Q9Y5F1 795 aa16.33■□□□□ 0.2
ATG4D-211ENST00000589753 FSD2A1L4K1 749 aa16.32■□□□□ 0.2
ATG4D-211ENST00000589753 F8W810 466 aa16.32■□□□□ 0.2
ATG4D-211ENST00000589753 AP5Z1O43299 807 aa16.32■□□□□ 0.2
ATG4D-211ENST00000589753 LRRN2O75325 713 aa16.32■□□□□ 0.2
ATG4D-211ENST00000589753 TADA2AO75478 443 aa16.32■□□□□ 0.2
ATG4D-211ENST00000589753 ASS1P00966 412 aaKnown RBP16.32■□□□□ 0.2
ATG4D-211ENST00000589753 ITGB1P05556 798 aa16.32■□□□□ 0.2
ATG4D-211ENST00000589753 LINC00271P0C7V0 271 aa16.32■□□□□ 0.2
ATG4D-211ENST00000589753 SLC9A1P19634 815 aa16.32■□□□□ 0.2
ATG4D-211ENST00000589753 PAX3P23760 479 aa16.32■□□□□ 0.2
ATG4D-211ENST00000589753 IGFBP6P24592 240 aaPredicted RBP16.32■□□□□ 0.2
ATG4D-211ENST00000589753 PON1P27169 355 aa16.32■□□□□ 0.2
ATG4D-211ENST00000589753 LILRA4P59901 499 aa16.32■□□□□ 0.2
ATG4D-211ENST00000589753 NOP14P78316 857 aaKnown RBP16.32■□□□□ 0.2
ATG4D-211ENST00000589753 KCNMA1Q12791 1236 aa16.32■□□□□ 0.2
ATG4D-211ENST00000589753 TRIM65Q6PJ69 517 aa16.32■□□□□ 0.2
ATG4D-211ENST00000589753 CD300LGQ6UXG3 332 aa16.32■□□□□ 0.2
ATG4D-211ENST00000589753 SLC39A11Q8N1S5 342 aa16.32■□□□□ 0.2
ATG4D-211ENST00000589753 LMO3Q8TAP4 145 aa16.32■□□□□ 0.2
ATG4D-211ENST00000589753 HASPINQ8TF76 798 aa16.32■□□□□ 0.2
ATG4D-211ENST00000589753 GBF1Q92538 1859 aa16.32■□□□□ 0.2
ATG4D-211ENST00000589753 ERGIC2Q96RQ1 377 aa16.32■□□□□ 0.2
ATG4D-211ENST00000589753 TRIM5Q9C035 493 aa16.32■□□□□ 0.2
ATG4D-211ENST00000589753 VRTNQ9H8Y1 702 aa16.32■□□□□ 0.2
ATG4D-211ENST00000589753 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.32■□□□□ 0.21e-7■■■■■ 271.5
ATG4D-211ENST00000589753 MARCH5Q9NX47 278 aa16.32■□□□□ 0.2
ATG4D-211ENST00000589753 SPG21Q9NZD8 308 aa16.32■□□□□ 0.2
ATG4D-211ENST00000589753 ADAM28Q9UKQ2 775 aa16.32■□□□□ 0.2
ATG4D-211ENST00000589753 COLQQ9Y215 455 aaPredicted RBP16.32■□□□□ 0.2
ATG4D-211ENST00000589753 KIAA1671Q9BY89 1806 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms