RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 XKR3Q5GH77 459 aa6.77□□□□□ -1.33
VPS25-204ENST00000589577 RNF20Q5VTR2 975 aa6.77□□□□□ -1.33
VPS25-204ENST00000589577 PLA2G4FQ68DD2 849 aa6.77□□□□□ -1.33
VPS25-204ENST00000589577 NAIF1Q69YI7 327 aaPredicted RBP6.77□□□□□ -1.33
VPS25-204ENST00000589577 SLC8B1Q6J4K2 584 aa6.77□□□□□ -1.33
VPS25-204ENST00000589577 PDXDC1Q6P996 788 aa6.77□□□□□ -1.33
VPS25-204ENST00000589577 TMTC3Q6ZXV5 915 aa6.77□□□□□ -1.33
VPS25-204ENST00000589577 ANO5Q75V66 913 aa6.77□□□□□ -1.33
VPS25-204ENST00000589577 MARCH9Q86YJ5 346 aa6.77□□□□□ -1.33
VPS25-204ENST00000589577 RAB11FIP4Q86YS3 637 aa6.77□□□□□ -1.33
VPS25-204ENST00000589577 SCUBE3Q8IX30 993 aa6.77□□□□□ -1.33
VPS25-204ENST00000589577 MB21D2Q8IYB1 491 aaPredicted RBP6.77□□□□□ -1.33
VPS25-204ENST00000589577 ZNF579Q8NAF0 562 aaKnown RBP6.77□□□□□ -1.33
VPS25-204ENST00000589577 OR2I1PQ8NGU4 316 aa6.77□□□□□ -1.33
VPS25-204ENST00000589577 ZNF461Q8TAF7 563 aa6.77□□□□□ -1.33
VPS25-204ENST00000589577 PRPF31Q8WWY3 499 aaKnown RBP6.77□□□□□ -1.33
VPS25-204ENST00000589577 PIGKQ92643 395 aa6.77□□□□□ -1.33
VPS25-204ENST00000589577 EZH1Q92800 747 aaPredicted RBP6.77□□□□□ -1.33
VPS25-204ENST00000589577 TMEM209Q96SK2 561 aa6.77□□□□□ -1.33
VPS25-204ENST00000589577 LRRC3Q9BY71 257 aa6.77□□□□□ -1.33
VPS25-204ENST00000589577 TPSD1Q9BZJ3 242 aa6.77□□□□□ -1.33
VPS25-204ENST00000589577 CSRNP2Q9H175 543 aa6.77□□□□□ -1.33
VPS25-204ENST00000589577 UNC45AQ9H3U1 944 aa6.77□□□□□ -1.33
VPS25-204ENST00000589577 PRORYQ9H606 182 aa6.77□□□□□ -1.33
VPS25-204ENST00000589577 CLMPQ9H6B4 373 aa6.77□□□□□ -1.33
VPS25-204ENST00000589577 ANO2Q9NQ90 1003 aa6.77□□□□□ -1.33
VPS25-204ENST00000589577 TCEAL9Q9UHQ7 104 aa6.77□□□□□ -1.33
VPS25-204ENST00000589577 BACE2Q9Y5Z0 518 aa6.77□□□□□ -1.33
VPS25-204ENST00000589577 SPTAN1Q13813 2472 aaKnown RBP6.77□□□□□ -1.33
VPS25-204ENST00000589577 ATXN2Q99700 1313 aaKnown RBP6.76□□□□□ -1.33
VPS25-204ENST00000589577 E7EWF7 191 aa6.76□□□□□ -1.33
VPS25-204ENST00000589577 PRRG1O14668 218 aa6.76□□□□□ -1.33
VPS25-204ENST00000589577 MSH4O15457 936 aa6.76□□□□□ -1.33
VPS25-204ENST00000589577 B4GALT5O43286 388 aa6.76□□□□□ -1.33
VPS25-204ENST00000589577 ATG13O75143 517 aa6.76□□□□□ -1.33
VPS25-204ENST00000589577 PRAMEF12O95522 483 aa6.76□□□□□ -1.33
VPS25-204ENST00000589577 APBB3O95704 486 aa6.76□□□□□ -1.33
VPS25-204ENST00000589577 PRKCBP05771 671 aa6.76□□□□□ -1.33
VPS25-204ENST00000589577 MYL4P12829 197 aa6.76□□□□□ -1.33
VPS25-204ENST00000589577 ATF2P15336 505 aa6.76□□□□□ -1.33
VPS25-204ENST00000589577 ARF4P18085 180 aaPredicted RBP6.76□□□□□ -1.33
VPS25-204ENST00000589577 ITPKBP27987 946 aa6.76□□□□□ -1.33
VPS25-204ENST00000589577 PTGER3P43115 390 aa6.76□□□□□ -1.33
VPS25-204ENST00000589577 DHPSP49366 369 aaPredicted RBP6.76□□□□□ -1.33
VPS25-204ENST00000589577 GNAQP50148 359 aa6.76□□□□□ -1.33
VPS25-204ENST00000589577 NPEPPSP55786 919 aa6.76□□□□□ -1.33
VPS25-204ENST00000589577 LAMTOR4Q0VGL1 99 aa6.76□□□□□ -1.33
VPS25-204ENST00000589577 FUT2Q10981 343 aa6.76□□□□□ -1.33
VPS25-204ENST00000589577 JAKMIP3Q5VZ66 844 aa6.76□□□□□ -1.33
VPS25-204ENST00000589577 PPP1R18Q6NYC8 613 aa6.76□□□□□ -1.33
VPS25-204ENST00000589577 NOTUMQ6P988 496 aa6.76□□□□□ -1.33
VPS25-204ENST00000589577 SLC23A3Q6PIS1 610 aa6.76□□□□□ -1.33
VPS25-204ENST00000589577 B3GNT9Q6UX72 402 aa6.76□□□□□ -1.33
VPS25-204ENST00000589577 SYT13Q7L8C5 426 aa6.76□□□□□ -1.33
VPS25-204ENST00000589577 CDR2LQ86X02 465 aaPredicted RBP6.76□□□□□ -1.33
VPS25-204ENST00000589577 TMC8Q8IU68 726 aa6.76□□□□□ -1.33
VPS25-204ENST00000589577 TEX2Q8IWB9 1127 aa6.76□□□□□ -1.33
VPS25-204ENST00000589577 YAF2Q8IY57 180 aa6.76□□□□□ -1.33
VPS25-204ENST00000589577 TCEAL8Q8IYN2 117 aa6.76□□□□□ -1.33
VPS25-204ENST00000589577 LSM14AQ8ND56 463 aaKnown RBP6.76□□□□□ -1.33
VPS25-204ENST00000589577 C3orf58Q8NDZ4 430 aa6.76□□□□□ -1.33
VPS25-204ENST00000589577 PIP4K2CQ8TBX8 421 aa6.76□□□□□ -1.33
VPS25-204ENST00000589577 FAM200AQ8TCP9 573 aa6.76□□□□□ -1.33
VPS25-204ENST00000589577 TMEM143Q96AN5 459 aa6.76□□□□□ -1.33
VPS25-204ENST00000589577 E2F7Q96AV8 911 aa6.76□□□□□ -1.33
VPS25-204ENST00000589577 CCDC51Q96ER9 411 aa6.76□□□□□ -1.33
VPS25-204ENST00000589577 ESYT1Q9BSJ8 1104 aa6.76□□□□□ -1.33
VPS25-204ENST00000589577 ZNF638Q14966 1978 aaKnown RBP6.76□□□□□ -1.33
VPS25-204ENST00000589577 A0A1W2PRU2 124 aa6.75□□□□□ -1.33
VPS25-204ENST00000589577 ANTXRLA6NF34 631 aa6.75□□□□□ -1.33
VPS25-204ENST00000589577 SMCO2A6NFE2 343 aa6.75□□□□□ -1.33
VPS25-204ENST00000589577 TMEM189-UBE2V1I3L0A0 370 aa6.75□□□□□ -1.33
VPS25-204ENST00000589577 I3L4J1 428 aa6.75□□□□□ -1.33
VPS25-204ENST00000589577 TRDMT1O14717 391 aaKnown RBP6.75□□□□□ -1.33
VPS25-204ENST00000589577 SGSM2O43147 1006 aa6.75□□□□□ -1.33
VPS25-204ENST00000589577 EPB41L2O43491 1005 aaKnown RBP6.75□□□□□ -1.33
VPS25-204ENST00000589577 ERLIN2O94905 339 aa6.75□□□□□ -1.33
VPS25-204ENST00000589577 CALM1P0DP23 149 aa6.75□□□□□ -1.33
VPS25-204ENST00000589577 CALM2P0DP24 149 aa6.75□□□□□ -1.33
VPS25-204ENST00000589577 CALM3P0DP25 149 aa6.75□□□□□ -1.33
VPS25-204ENST00000589577 AXLP30530 894 aa6.75□□□□□ -1.33
VPS25-204ENST00000589577 SFNP31947 248 aa6.75□□□□□ -1.33
VPS25-204ENST00000589577 CIITAP33076 1130 aa6.75□□□□□ -1.33
VPS25-204ENST00000589577 RDXP35241 583 aaKnown RBP6.75□□□□□ -1.33
VPS25-204ENST00000589577 ABCG1P45844 678 aa6.75□□□□□ -1.33
VPS25-204ENST00000589577 JAK3P52333 1124 aa6.75□□□□□ -1.33
VPS25-204ENST00000589577 DGKEP52429 567 aa6.75□□□□□ -1.33
VPS25-204ENST00000589577 MBTD1Q05BQ5 628 aa6.75□□□□□ -1.33
VPS25-204ENST00000589577 CYP4F3Q08477 520 aa6.75□□□□□ -1.33
VPS25-204ENST00000589577 ELAVL2Q12926 359 aaKnown RBP6.75□□□□□ -1.33
VPS25-204ENST00000589577 TRDNQ13061 729 aa6.75□□□□□ -1.33
VPS25-204ENST00000589577 CAMK2BQ13554 666 aa6.75□□□□□ -1.33
VPS25-204ENST00000589577 DMC1Q14565 340 aa6.75□□□□□ -1.33
VPS25-204ENST00000589577 SART3Q15020 963 aaKnown RBP6.75□□□□□ -1.33
VPS25-204ENST00000589577 TRIP6Q15654 476 aaKnown RBP6.75□□□□□ -1.33
VPS25-204ENST00000589577 ITPRIPL2Q3MIP1 535 aa6.75□□□□□ -1.33
VPS25-204ENST00000589577 ARHGAP29Q52LW3 1261 aa6.75□□□□□ -1.33
VPS25-204ENST00000589577 CYP4A22Q5TCH4 519 aa6.75□□□□□ -1.33
VPS25-204ENST00000589577 PEAR1Q5VY43 1037 aaPredicted RBP6.75□□□□□ -1.33
VPS25-204ENST00000589577 SLCO6A1Q86UG4 719 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms