RNA–Protein interactions for RNA: ENST00000589538.5

DNMT1-221, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-221ENST00000589538 RIPOR3Q96MK2 946 aa17.8■□□□□ 0.44
DNMT1-221ENST00000589538 NECTIN4Q96NY8 510 aa17.8■□□□□ 0.44
DNMT1-221ENST00000589538 S1PR5Q9H228 398 aa17.8■□□□□ 0.44
DNMT1-221ENST00000589538 ADAM7Q9H2U9 754 aa17.8■□□□□ 0.44
DNMT1-221ENST00000589538 PCIF1Q9H4Z3 704 aa17.8■□□□□ 0.44
DNMT1-221ENST00000589538 AGPAT3Q9NRZ7 376 aa17.8■□□□□ 0.44
DNMT1-221ENST00000589538 USP15Q9Y4E8 981 aaPredicted RBP17.8■□□□□ 0.44
DNMT1-221ENST00000589538 BACE2Q9Y5Z0 518 aa17.8■□□□□ 0.44
DNMT1-221ENST00000589538 SPTBN5Q9NRC6 3674 aaKnown RBP17.8■□□□□ 0.44
DNMT1-221ENST00000589538 VWA8A3KMH1 1905 aa17.8■□□□□ 0.44
DNMT1-221ENST00000589538 H7C4K7 107 aa17.79■□□□□ 0.44
DNMT1-221ENST00000589538 TGFB1I1O43294 461 aa17.79■□□□□ 0.44
DNMT1-221ENST00000589538 RHOBTB3O94955 611 aa17.79■□□□□ 0.44
DNMT1-221ENST00000589538 NFICP08651 508 aa17.79■□□□□ 0.44
DNMT1-221ENST00000589538 TKTP29401 623 aaKnown RBP17.79■□□□□ 0.44
DNMT1-221ENST00000589538 HOXD13P35453 343 aa17.79■□□□□ 0.44
DNMT1-221ENST00000589538 MTHFRP42898 656 aa17.79■□□□□ 0.44
DNMT1-221ENST00000589538 DPYDQ12882 1025 aa17.79■□□□□ 0.44
DNMT1-221ENST00000589538 KCNB1Q14721 858 aa17.79■□□□□ 0.44
DNMT1-221ENST00000589538 PRSS55Q6UWB4 352 aaPredicted RBP17.79■□□□□ 0.44
DNMT1-221ENST00000589538 CYP26C1Q6V0L0 522 aa17.79■□□□□ 0.44
DNMT1-221ENST00000589538 NELFCDQ8IXH7 590 aa17.79■□□□□ 0.44
DNMT1-221ENST00000589538 C12orf56Q8IXR9 622 aa17.79■□□□□ 0.44
DNMT1-221ENST00000589538 HSPBP1Q9NZL4 362 aa17.79■□□□□ 0.44
DNMT1-221ENST00000589538 MTRRQ9UBK8 725 aa17.79■□□□□ 0.44
DNMT1-221ENST00000589538 PCDHB8Q9UN66 801 aa17.79■□□□□ 0.44
DNMT1-221ENST00000589538 MTCL1Q9Y4B5 1905 aaKnown RBP17.78■□□□□ 0.44
DNMT1-221ENST00000589538 GOLGA8IPA6NC78 632 aa17.78■□□□□ 0.44
DNMT1-221ENST00000589538 GOLGA8JA6NMD2 632 aa17.78■□□□□ 0.44
DNMT1-221ENST00000589538 TNFRSF10AO00220 468 aa17.78■□□□□ 0.44
DNMT1-221ENST00000589538 AARSP49588 968 aaKnown RBP eCLIP17.78■□□□□ 0.443e-8■■□□□ 12.6
DNMT1-221ENST00000589538 STK4Q13043 487 aa17.78■□□□□ 0.44
DNMT1-221ENST00000589538 CMASQ8NFW8 434 aaPredicted RBP17.78■□□□□ 0.44
DNMT1-221ENST00000589538 NOC3LQ8WTT2 800 aaKnown RBP17.78■□□□□ 0.44
DNMT1-221ENST00000589538 TIGD1Q96MW7 591 aa17.78■□□□□ 0.44
DNMT1-221ENST00000589538 CLSTN3Q9BQT9 956 aa17.78■□□□□ 0.44
DNMT1-221ENST00000589538 OXCT2Q9BYC2 517 aaPredicted RBP17.78■□□□□ 0.44
DNMT1-221ENST00000589538 RHOBTB2Q9BYZ6 727 aa17.78■□□□□ 0.44
DNMT1-221ENST00000589538 MAN1C1Q9NR34 630 aa17.78■□□□□ 0.44
DNMT1-221ENST00000589538 DPP3Q9NY33 737 aa17.78■□□□□ 0.44
DNMT1-221ENST00000589538 PLXNA3P51805 1871 aa17.78■□□□□ 0.44
DNMT1-221ENST00000589538 ANO9A1A5B4 782 aa17.77■□□□□ 0.44
DNMT1-221ENST00000589538 I3L4J1 428 aa17.77■□□□□ 0.44
DNMT1-221ENST00000589538 M0QZQ0 153 aa17.77■□□□□ 0.44
DNMT1-221ENST00000589538 PRR29P0C7W0 189 aa17.77■□□□□ 0.44
DNMT1-221ENST00000589538 RPL17P18621 184 aaKnown RBP17.77■□□□□ 0.44
DNMT1-221ENST00000589538 IGFBP6P24592 240 aaPredicted RBP17.77■□□□□ 0.44
DNMT1-221ENST00000589538 PNPLA4P41247 253 aa17.77■□□□□ 0.44
DNMT1-221ENST00000589538 ZP2Q05996 745 aa17.77■□□□□ 0.44
DNMT1-221ENST00000589538 RAB33AQ14088 237 aa17.77■□□□□ 0.44
DNMT1-221ENST00000589538 CBX2Q14781 532 aaPredicted RBP17.77■□□□□ 0.44
DNMT1-221ENST00000589538 ATAT1Q5SQI0 421 aa17.77■□□□□ 0.44
DNMT1-221ENST00000589538 VARS2Q5ST30 1063 aaKnown RBP17.77■□□□□ 0.44
DNMT1-221ENST00000589538 RARS2Q5T160 578 aaKnown RBP17.77■□□□□ 0.44
DNMT1-221ENST00000589538 C9orf57Q5W0N0 161 aa17.77■□□□□ 0.44
DNMT1-221ENST00000589538 LILRA6Q6PI73 481 aa17.77■□□□□ 0.44
DNMT1-221ENST00000589538 DSTYKQ6XUX3 929 aa17.77■□□□□ 0.44
DNMT1-221ENST00000589538 C15orf39Q6ZRI6 1047 aa17.77■□□□□ 0.44
DNMT1-221ENST00000589538 RTL10Q7L3V2 364 aa17.77■□□□□ 0.44
DNMT1-221ENST00000589538 PALB2Q86YC2 1186 aa17.77■□□□□ 0.44
DNMT1-221ENST00000589538 XXYLT1Q8NBI6 393 aa17.77■□□□□ 0.44
DNMT1-221ENST00000589538 KIAA0895Q8NCT3 520 aa17.77■□□□□ 0.44
DNMT1-221ENST00000589538 ENGASEQ8NFI3 743 aa17.77■□□□□ 0.44
DNMT1-221ENST00000589538 ZNF560Q96MR9 790 aa17.77■□□□□ 0.44
DNMT1-221ENST00000589538 PHF7Q9BWX1 381 aaPredicted RBP17.77■□□□□ 0.44
DNMT1-221ENST00000589538 GTPBP4Q9BZE4 634 aaKnown RBP17.77■□□□□ 0.44
DNMT1-221ENST00000589538 RMND1Q9NWS8 449 aa17.77■□□□□ 0.44
DNMT1-221ENST00000589538 ZDHHC7Q9NXF8 308 aa17.77■□□□□ 0.44
DNMT1-221ENST00000589538 PIRO00625 290 aa17.76■□□□□ 0.43
DNMT1-221ENST00000589538 TGM5O43548 720 aa17.76■□□□□ 0.43
DNMT1-221ENST00000589538 SMC2O95347 1197 aa17.76■□□□□ 0.43
DNMT1-221ENST00000589538 GUCY2FP51841 1108 aa17.76■□□□□ 0.43
DNMT1-221ENST00000589538 LILRA4P59901 499 aa17.76■□□□□ 0.43
DNMT1-221ENST00000589538 TFAMQ00059 246 aaKnown RBP17.76■□□□□ 0.43
DNMT1-221ENST00000589538 SNW1Q13573 536 aaKnown RBP17.76■□□□□ 0.43
DNMT1-221ENST00000589538 MRPL58Q14197 206 aaKnown RBP17.76■□□□□ 0.43
DNMT1-221ENST00000589538 ZNF280DQ6N043 979 aa17.76■□□□□ 0.43
DNMT1-221ENST00000589538 USP37Q86T82 979 aa17.76■□□□□ 0.43
DNMT1-221ENST00000589538 GLYCTKQ8IVS8 523 aa17.76■□□□□ 0.43
DNMT1-221ENST00000589538 EFCAB13Q8IY85 973 aa17.76■□□□□ 0.43
DNMT1-221ENST00000589538 ELOA2Q8IYF1 753 aaPredicted RBP17.76■□□□□ 0.43
DNMT1-221ENST00000589538 KREMEN2Q8NCW0 462 aa17.76■□□□□ 0.43
DNMT1-221ENST00000589538 TMEM174Q8WUU8 243 aa17.76■□□□□ 0.43
DNMT1-221ENST00000589538 NECAB3Q96P71 396 aaPredicted RBP17.76■□□□□ 0.43
DNMT1-221ENST00000589538 APOL5Q9BWW9 433 aa17.76■□□□□ 0.43
DNMT1-221ENST00000589538 R3HCC1Q9Y3T6 440 aaKnown RBP17.76■□□□□ 0.43
DNMT1-221ENST00000589538 C19orf67A6NJJ6 358 aa17.75■□□□□ 0.43
DNMT1-221ENST00000589538 TULP1O00294 542 aaPredicted RBP17.75■□□□□ 0.43
DNMT1-221ENST00000589538 PDXKO00764 312 aa17.75■□□□□ 0.43
DNMT1-221ENST00000589538 CLIC2O15247 247 aa17.75■□□□□ 0.43
DNMT1-221ENST00000589538 PRPF40AO75400 957 aaKnown RBP17.75■□□□□ 0.43
DNMT1-221ENST00000589538 ODC1P11926 461 aa17.75■□□□□ 0.43
DNMT1-221ENST00000589538 TYMPP19971 482 aa17.75■□□□□ 0.43
DNMT1-221ENST00000589538 SSTR3P32745 418 aaPredicted RBP17.75■□□□□ 0.43
DNMT1-221ENST00000589538 OR1D2P34982 312 aa17.75■□□□□ 0.43
DNMT1-221ENST00000589538 TAF6P49848 677 aa17.75■□□□□ 0.43
DNMT1-221ENST00000589538 CYP2J2P51589 502 aa17.75■□□□□ 0.43
DNMT1-221ENST00000589538 MYBPC2Q14324 1141 aa17.75■□□□□ 0.43
DNMT1-221ENST00000589538 SNRNP35Q16560 246 aaKnown RBP17.75■□□□□ 0.43
DNMT1-221ENST00000589538 LIN9Q5TKA1 542 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms