RNA–Protein interactions for RNA: ENST00000589528.1

ACTN4-211, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 441 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-211ENST00000589528 CEP120Q8N960 986 aa16.69■□□□□ 0.26
ACTN4-211ENST00000589528 CHAMP1Q96JM3 812 aa16.69■□□□□ 0.26
ACTN4-211ENST00000589528 TCHPQ9BT92 498 aa16.69■□□□□ 0.26
ACTN4-211ENST00000589528 TRPV5Q9NQA5 729 aa16.69■□□□□ 0.26
ACTN4-211ENST00000589528 FBXL5Q9UKA1 691 aa16.69■□□□□ 0.26
ACTN4-211ENST00000589528 COL4A2P08572 1712 aa16.69■□□□□ 0.26
ACTN4-211ENST00000589528 MYH11P35749 1972 aa16.69■□□□□ 0.26
ACTN4-211ENST00000589528 PHLPP2Q6ZVD8 1323 aa16.69■□□□□ 0.26
ACTN4-211ENST00000589528 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.68■□□□□ 0.26
ACTN4-211ENST00000589528 SHISA7A6NL88 538 aa16.68■□□□□ 0.26
ACTN4-211ENST00000589528 LRP3O75074 770 aa16.68■□□□□ 0.26
ACTN4-211ENST00000589528 ADRB1P08588 477 aa16.68■□□□□ 0.26
ACTN4-211ENST00000589528 OR52Z1P0C646 297 aa16.68■□□□□ 0.26
ACTN4-211ENST00000589528 TDGF1P13385 188 aa16.68■□□□□ 0.26
ACTN4-211ENST00000589528 CCNE1P24864 410 aa16.68■□□□□ 0.26
ACTN4-211ENST00000589528 CCT6AP40227 531 aaKnown RBP16.68■□□□□ 0.26
ACTN4-211ENST00000589528 VIPR2P41587 438 aa16.68■□□□□ 0.26
ACTN4-211ENST00000589528 CCR2P41597 374 aa16.68■□□□□ 0.26
ACTN4-211ENST00000589528 LRRC32Q14392 662 aa16.68■□□□□ 0.26
ACTN4-211ENST00000589528 ST3GAL2Q16842 350 aa16.68■□□□□ 0.26
ACTN4-211ENST00000589528 PPM1JQ5JR12 505 aa16.68■□□□□ 0.26
ACTN4-211ENST00000589528 POTEHQ6S545 545 aa16.68■□□□□ 0.26
ACTN4-211ENST00000589528 MAMSTRQ6ZN01 415 aa16.68■□□□□ 0.26
ACTN4-211ENST00000589528 MAP4K3Q8IVH8 894 aa16.68■□□□□ 0.26
ACTN4-211ENST00000589528 HS6ST3Q8IZP7 471 aa16.68■□□□□ 0.26
ACTN4-211ENST00000589528 LEMD2Q8NC56 503 aa16.68■□□□□ 0.26
ACTN4-211ENST00000589528 APPL2Q8NEU8 664 aa16.68■□□□□ 0.26
ACTN4-211ENST00000589528 ZSCAN18Q8TBC5 510 aaPredicted RBP16.68■□□□□ 0.26
ACTN4-211ENST00000589528 FAM200AQ8TCP9 573 aa16.68■□□□□ 0.26
ACTN4-211ENST00000589528 GTF3C6Q969F1 213 aa16.68■□□□□ 0.26
ACTN4-211ENST00000589528 ACAP3Q96P50 834 aa16.68■□□□□ 0.26
ACTN4-211ENST00000589528 MRPL4Q9BYD3 311 aaKnown RBP16.68■□□□□ 0.26
ACTN4-211ENST00000589528 CDT1Q9H211 546 aa16.68■□□□□ 0.26
ACTN4-211ENST00000589528 BHMT2Q9H2M3 363 aa16.68■□□□□ 0.26
ACTN4-211ENST00000589528 MAP1BP46821 2468 aaKnown RBP16.67■□□□□ 0.26
ACTN4-211ENST00000589528 HARSP12081 509 aaKnown RBP16.67■□□□□ 0.26
ACTN4-211ENST00000589528 GJA1P17302 382 aa16.67■□□□□ 0.26
ACTN4-211ENST00000589528 MUTP22033 750 aa16.67■□□□□ 0.26
ACTN4-211ENST00000589528 MARCKSP29966 332 aaPredicted RBP16.67■□□□□ 0.26
ACTN4-211ENST00000589528 RPL9P32969 192 aaKnown RBP16.67■□□□□ 0.26
ACTN4-211ENST00000589528 KPNA1P52294 538 aaPredicted RBP16.67■□□□□ 0.26
ACTN4-211ENST00000589528 SATB1Q01826 763 aa16.67■□□□□ 0.26
ACTN4-211ENST00000589528 DMP1Q13316 513 aaPredicted RBP16.67■□□□□ 0.26
ACTN4-211ENST00000589528 C1orf228Q6PIY5 440 aa16.67■□□□□ 0.26
ACTN4-211ENST00000589528 MFSD6LQ8IWD5 586 aa16.67■□□□□ 0.26
ACTN4-211ENST00000589528 ZNF687Q8N1G0 1237 aa16.67■□□□□ 0.26
ACTN4-211ENST00000589528 NSUN7Q8NE18 718 aaKnown RBP16.67■□□□□ 0.26
ACTN4-211ENST00000589528 ZSWIM3Q96MP5 696 aa16.67■□□□□ 0.26
ACTN4-211ENST00000589528 ACO2Q99798 780 aaKnown RBP16.67■□□□□ 0.26
ACTN4-211ENST00000589528 GPR88Q9GZN0 384 aa16.67■□□□□ 0.26
ACTN4-211ENST00000589528 SEMA4GQ9NTN9 838 aa16.67■□□□□ 0.26
ACTN4-211ENST00000589528 AFF4Q9UHB7 1163 aaKnown RBP16.67■□□□□ 0.26
ACTN4-211ENST00000589528 SPAG17Q6Q759 2223 aa16.66■□□□□ 0.26
ACTN4-211ENST00000589528 SLC30A4O14863 429 aa16.66■□□□□ 0.26
ACTN4-211ENST00000589528 PEX3P56589 373 aa16.66■□□□□ 0.26
ACTN4-211ENST00000589528 GNL2Q13823 731 aaKnown RBP16.66■□□□□ 0.26
ACTN4-211ENST00000589528 TEAD2Q15562 447 aa16.66■□□□□ 0.26
ACTN4-211ENST00000589528 ZNF174Q15697 407 aa16.66■□□□□ 0.26
ACTN4-211ENST00000589528 ME3Q16798 604 aa16.66■□□□□ 0.26
ACTN4-211ENST00000589528 ALKAL1Q6UXT8 129 aa16.66■□□□□ 0.26
ACTN4-211ENST00000589528 PRR23CQ6ZRP0 262 aa16.66■□□□□ 0.26
ACTN4-211ENST00000589528 CEP68Q76N32 757 aa16.66■□□□□ 0.26
ACTN4-211ENST00000589528 SPEM1Q8N4L4 309 aa16.66■□□□□ 0.26
ACTN4-211ENST00000589528 E2F7Q96AV8 911 aa16.66■□□□□ 0.26
ACTN4-211ENST00000589528 MSANTD3Q96H12 275 aa16.66■□□□□ 0.26
ACTN4-211ENST00000589528 ZMAT2Q96NC0 199 aaKnown RBP16.66■□□□□ 0.26
ACTN4-211ENST00000589528 CEP72Q9P209 647 aa16.66■□□□□ 0.26
ACTN4-211ENST00000589528 MAFFQ9ULX9 164 aa16.66■□□□□ 0.26
ACTN4-211ENST00000589528 SDK1Q7Z5N4 2213 aa16.65■□□□□ 0.26
ACTN4-211ENST00000589528 HEPACAM2A8MVW5 462 aa16.65■□□□□ 0.26
ACTN4-211ENST00000589528 CHURC1-FNTBB4DL54 471 aa16.65■□□□□ 0.26
ACTN4-211ENST00000589528 NRG2O14511 850 aaPredicted RBP16.65■□□□□ 0.26
ACTN4-211ENST00000589528 DPYSL4O14531 572 aa16.65■□□□□ 0.26
ACTN4-211ENST00000589528 JAK2O60674 1132 aa16.65■□□□□ 0.26
ACTN4-211ENST00000589528 LARGE1O95461 756 aa16.65■□□□□ 0.26
ACTN4-211ENST00000589528 CHRNB1P11230 501 aa16.65■□□□□ 0.26
ACTN4-211ENST00000589528 CNR2P34972 360 aa16.65■□□□□ 0.26
ACTN4-211ENST00000589528 FNTBP49356 437 aa16.65■□□□□ 0.26
ACTN4-211ENST00000589528 GUCY1B3Q02153 619 aa16.65■□□□□ 0.26
ACTN4-211ENST00000589528 ORC2Q13416 577 aaPredicted RBP16.65■□□□□ 0.26
ACTN4-211ENST00000589528 MRPL58Q14197 206 aaKnown RBP16.65■□□□□ 0.26
ACTN4-211ENST00000589528 XKR4Q5GH76 650 aa16.65■□□□□ 0.26
ACTN4-211ENST00000589528 HEATR6Q6AI08 1181 aaKnown RBP16.65■□□□□ 0.26
ACTN4-211ENST00000589528 DDX12PQ92771 950 aa16.65■□□□□ 0.26
ACTN4-211ENST00000589528 C18orf25Q96B23 403 aaPredicted RBP16.65■□□□□ 0.26
ACTN4-211ENST00000589528 SUSD3Q96L08 255 aa16.65■□□□□ 0.26
ACTN4-211ENST00000589528 TBC1D32Q96NH3 1257 aa16.65■□□□□ 0.26
ACTN4-211ENST00000589528 C8orf33Q9H7E9 229 aaPredicted RBP16.65■□□□□ 0.26
ACTN4-211ENST00000589528 TRPV4Q9HBA0 871 aa16.65■□□□□ 0.26
ACTN4-211ENST00000589528 KMT5AQ9NQR1 393 aa16.65■□□□□ 0.26
ACTN4-211ENST00000589528 CNTN3Q9P232 1028 aa16.65■□□□□ 0.26
ACTN4-211ENST00000589528 KIAA1024Q9UPX6 916 aa16.65■□□□□ 0.26
ACTN4-211ENST00000589528 KMT2BQ9UMN6 2715 aaPredicted RBP16.65■□□□□ 0.26
ACTN4-211ENST00000589528 GREB1Q4ZG55 1949 aa16.64■□□□□ 0.26
ACTN4-211ENST00000589528 SLC38A8A6NNN8 435 aa16.64■□□□□ 0.25
ACTN4-211ENST00000589528 FOXD2O60548 495 aaPredicted RBP16.64■□□□□ 0.25
ACTN4-211ENST00000589528 MCF2P10911 925 aa16.64■□□□□ 0.25
ACTN4-211ENST00000589528 KCNE1P15382 129 aa16.64■□□□□ 0.25
ACTN4-211ENST00000589528 NPTX2P47972 431 aa16.64■□□□□ 0.25
ACTN4-211ENST00000589528 ANAPC15P60006 121 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms