RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 COLGALT2Q8IYK4 626 aa18.27■□□□□ 0.52
SCAMP4-211ENST00000588907 TDHQ8IZJ6 230 aa18.27■□□□□ 0.52
SCAMP4-211ENST00000588907 FIBCD1Q8N539 461 aa18.27■□□□□ 0.52
SCAMP4-211ENST00000588907 SP7Q8TDD2 431 aaPredicted RBP18.27■□□□□ 0.52
SCAMP4-211ENST00000588907 TAS1R2Q8TE23 839 aa18.27■□□□□ 0.52
SCAMP4-211ENST00000588907 FAM124BQ9H5Z6 455 aaPredicted RBP18.27■□□□□ 0.52
SCAMP4-211ENST00000588907 A0A1W2PPC1 479 aa18.26■□□□□ 0.51
SCAMP4-211ENST00000588907 ALDH2P05091 517 aa18.26■□□□□ 0.51
SCAMP4-211ENST00000588907 PPM1AP35813 382 aa18.26■□□□□ 0.51
SCAMP4-211ENST00000588907 TAF6P49848 677 aa18.26■□□□□ 0.51
SCAMP4-211ENST00000588907 GATMP50440 423 aa18.26■□□□□ 0.51
SCAMP4-211ENST00000588907 SOX4Q06945 474 aaPredicted RBP18.26■□□□□ 0.51
SCAMP4-211ENST00000588907 ZNF699Q32M78 642 aa18.26■□□□□ 0.51
SCAMP4-211ENST00000588907 DCLRE1AQ6PJP8 1040 aa18.26■□□□□ 0.51
SCAMP4-211ENST00000588907 CXorf38Q8TB03 319 aa18.26■□□□□ 0.51
SCAMP4-211ENST00000588907 COLEC11Q9BWP8 271 aa18.26■□□□□ 0.51
SCAMP4-211ENST00000588907 CXCL16Q9H2A7 254 aa18.26■□□□□ 0.51
SCAMP4-211ENST00000588907 NRDE2Q9H7Z3 1164 aa18.26■□□□□ 0.51
SCAMP4-211ENST00000588907 PCDH10Q9P2E7 1040 aa18.26■□□□□ 0.51
SCAMP4-211ENST00000588907 SIX4Q9UIU6 781 aa18.26■□□□□ 0.51
SCAMP4-211ENST00000588907 AGAP1Q9UPQ3 857 aa18.26■□□□□ 0.51
SCAMP4-211ENST00000588907 PCDHA11Q9Y5I1 949 aa18.26■□□□□ 0.51
SCAMP4-211ENST00000588907 TNRC18O15417 2968 aaPredicted RBP18.25■□□□□ 0.51
SCAMP4-211ENST00000588907 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.25■□□□□ 0.51
SCAMP4-211ENST00000588907 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.25■□□□□ 0.51
SCAMP4-211ENST00000588907 CASTOR2A6NHX0 329 aa18.25■□□□□ 0.51
SCAMP4-211ENST00000588907 TRAPPC3O43617 180 aa18.25■□□□□ 0.51
SCAMP4-211ENST00000588907 DDHD2O94830 711 aa18.25■□□□□ 0.51
SCAMP4-211ENST00000588907 ASS1P00966 412 aaKnown RBP18.25■□□□□ 0.51
SCAMP4-211ENST00000588907 CLCNKBP51801 687 aa18.25■□□□□ 0.51
SCAMP4-211ENST00000588907 RAB30Q15771 203 aa18.25■□□□□ 0.51
SCAMP4-211ENST00000588907 SPOUT1Q5T280 376 aaKnown RBP18.25■□□□□ 0.51
SCAMP4-211ENST00000588907 TRIM65Q6PJ69 517 aa18.25■□□□□ 0.51
SCAMP4-211ENST00000588907 ZNF280BQ86YH2 543 aa18.25■□□□□ 0.51
SCAMP4-211ENST00000588907 EHBP1Q8NDI1 1231 aa18.25■□□□□ 0.51
SCAMP4-211ENST00000588907 ANP32BQ92688 251 aaKnown RBP18.25■□□□□ 0.51
SCAMP4-211ENST00000588907 MRFAP1L1Q96HT8 127 aa18.25■□□□□ 0.51
SCAMP4-211ENST00000588907 HPDLQ96IR7 371 aa18.25■□□□□ 0.51
SCAMP4-211ENST00000588907 ZNF558Q96NG5 402 aa18.25■□□□□ 0.51
SCAMP4-211ENST00000588907 NAP1L5Q96NT1 182 aaPredicted RBP18.25■□□□□ 0.51
SCAMP4-211ENST00000588907 XPO4Q9C0E2 1151 aaKnown RBP18.25■□□□□ 0.51
SCAMP4-211ENST00000588907 PLCB1Q9NQ66 1216 aa18.25■□□□□ 0.51
SCAMP4-211ENST00000588907 FAN1Q9Y2M0 1017 aa18.25■□□□□ 0.51
SCAMP4-211ENST00000588907 B3GAT3O94766 335 aa18.24■□□□□ 0.51
SCAMP4-211ENST00000588907 CLSTN1O94985 981 aa18.24■□□□□ 0.51
SCAMP4-211ENST00000588907 VNN1O95497 513 aa18.24■□□□□ 0.51
SCAMP4-211ENST00000588907 TBXAS1P24557 533 aaPredicted RBP18.24■□□□□ 0.51
SCAMP4-211ENST00000588907 OR1G1P47890 313 aa18.24■□□□□ 0.51
SCAMP4-211ENST00000588907 BCAR1P56945 870 aa18.24■□□□□ 0.51
SCAMP4-211ENST00000588907 NOP14P78316 857 aaKnown RBP18.24■□□□□ 0.51
SCAMP4-211ENST00000588907 ELAVL2Q12926 359 aaKnown RBP18.24■□□□□ 0.51
SCAMP4-211ENST00000588907 ENOSF1Q7L5Y1 443 aa18.24■□□□□ 0.51
SCAMP4-211ENST00000588907 TMCO2Q7Z6W1 182 aaPredicted RBP18.24■□□□□ 0.51
SCAMP4-211ENST00000588907 CLP1Q92989 425 aaKnown RBP18.24■□□□□ 0.51
SCAMP4-211ENST00000588907 SAMD11Q96NU1 681 aa18.24■□□□□ 0.51
SCAMP4-211ENST00000588907 NT5C1BQ96P26 610 aa18.24■□□□□ 0.51
SCAMP4-211ENST00000588907 INTS2Q9H0H0 1204 aaKnown RBP18.24■□□□□ 0.51
SCAMP4-211ENST00000588907 CWH43Q9H720 699 aa18.24■□□□□ 0.51
SCAMP4-211ENST00000588907 NUB1Q9Y5A7 615 aa18.24■□□□□ 0.51
SCAMP4-211ENST00000588907 PCDHB12Q9Y5F1 795 aa18.24■□□□□ 0.51
SCAMP4-211ENST00000588907 ITIH6Q6UXX5 1313 aa18.23■□□□□ 0.51
SCAMP4-211ENST00000588907 GALTP07902 379 aa18.23■□□□□ 0.51
SCAMP4-211ENST00000588907 PON1P27169 355 aa18.23■□□□□ 0.51
SCAMP4-211ENST00000588907 GUCY2FP51841 1108 aa18.23■□□□□ 0.51
SCAMP4-211ENST00000588907 LILRA4P59901 499 aa18.23■□□□□ 0.51
SCAMP4-211ENST00000588907 MYL6P60660 151 aa18.23■□□□□ 0.51
SCAMP4-211ENST00000588907 TNNC1P63316 161 aa18.23■□□□□ 0.51
SCAMP4-211ENST00000588907 SYCP1Q15431 976 aa18.23■□□□□ 0.51
SCAMP4-211ENST00000588907 ZNF667Q5HYK9 610 aa18.23■□□□□ 0.51
SCAMP4-211ENST00000588907 TTC39CQ8N584 583 aa18.23■□□□□ 0.51
SCAMP4-211ENST00000588907 SPATA18Q8TC71 538 aa18.23■□□□□ 0.51
SCAMP4-211ENST00000588907 JAKMIP2Q96AA8 810 aa18.23■□□□□ 0.51
SCAMP4-211ENST00000588907 PCMTD1Q96MG8 357 aaPredicted RBP18.23■□□□□ 0.51
SCAMP4-211ENST00000588907 NUP58Q9BVL2 599 aa18.23■□□□□ 0.51
SCAMP4-211ENST00000588907 PLVAPQ9BX97 442 aa18.23■□□□□ 0.51
SCAMP4-211ENST00000588907 NIF3L1Q9GZT8 377 aa18.23■□□□□ 0.51
SCAMP4-211ENST00000588907 XYLT2Q9H1B5 865 aa18.23■□□□□ 0.51
SCAMP4-211ENST00000588907 GOLGA2P5Q9HBQ8 144 aa18.23■□□□□ 0.51
SCAMP4-211ENST00000588907 GDAP2Q9NXN4 497 aa18.23■□□□□ 0.51
SCAMP4-211ENST00000588907 APEX2Q9UBZ4 518 aa18.23■□□□□ 0.51
SCAMP4-211ENST00000588907 MSRAQ9UJ68 235 aa18.23■□□□□ 0.51
SCAMP4-211ENST00000588907 FBXL5Q9UKA1 691 aa18.23■□□□□ 0.51
SCAMP4-211ENST00000588907 MRPL42Q9Y6G3 142 aaKnown RBP18.23■□□□□ 0.51
SCAMP4-211ENST00000588907 SF3B1O75533 1304 aaKnown RBP eCLIP18.23■□□□□ 0.51
SCAMP4-211ENST00000588907 KPNA7A9QM74 516 aa18.22■□□□□ 0.51
SCAMP4-211ENST00000588907 RBAK-RBAKDNI3L0D1 243 aa18.22■□□□□ 0.51
SCAMP4-211ENST00000588907 NRP1O14786 923 aa18.22■□□□□ 0.51
SCAMP4-211ENST00000588907 CST3P01034 146 aaPredicted RBP18.22■□□□□ 0.51
SCAMP4-211ENST00000588907 FAM163BP0C2L3 166 aa18.22■□□□□ 0.51
SCAMP4-211ENST00000588907 AARSP49588 968 aaKnown RBP eCLIP18.22■□□□□ 0.51
SCAMP4-211ENST00000588907 YWHAEP62258 255 aaKnown RBP18.22■□□□□ 0.51
SCAMP4-211ENST00000588907 GCNT1Q02742 428 aa18.22■□□□□ 0.51
SCAMP4-211ENST00000588907 TRIM14Q14142 442 aa18.22■□□□□ 0.51
SCAMP4-211ENST00000588907 KCNT2Q6UVM3 1135 aa18.22■□□□□ 0.51
SCAMP4-211ENST00000588907 DPH6Q7L8W6 267 aa18.22■□□□□ 0.51
SCAMP4-211ENST00000588907 FMNL3Q8IVF7 1028 aa18.22■□□□□ 0.51
SCAMP4-211ENST00000588907 NEK11Q8NG66 645 aa18.22■□□□□ 0.51
SCAMP4-211ENST00000588907 LMO3Q8TAP4 145 aa18.22■□□□□ 0.51
SCAMP4-211ENST00000588907 SEMA4DQ92854 862 aa18.22■□□□□ 0.51
SCAMP4-211ENST00000588907 CRACR2AQ9BSW2 395 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms