RNA–Protein interactions for RNA: ENST00000588815.5

CAPNS1-206, Transcript of calpain small subunit 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CAPNS1, Length 1,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-206ENST00000588815 ZSCAN12O43309 604 aa33.33■■■□□ 2.93
CAPNS1-206ENST00000588815 EOMESO95936 686 aa33.33■■■□□ 2.93
CAPNS1-206ENST00000588815 SLC24A5Q71RS6 500 aa33.33■■■□□ 2.93
CAPNS1-206ENST00000588815 SEPT8Q92599 483 aa33.33■■■□□ 2.93
CAPNS1-206ENST00000588815 TSPYL2Q9H2G4 693 aaPredicted RBP33.33■■■□□ 2.93
CAPNS1-206ENST00000588815 DEF6Q9H4E7 631 aa33.33■■■□□ 2.93
CAPNS1-206ENST00000588815 TBX21Q9UL17 535 aa33.33■■■□□ 2.93
CAPNS1-206ENST00000588815 NUB1Q9Y5A7 615 aa33.33■■■□□ 2.93
CAPNS1-206ENST00000588815 MICAL3Q7RTP6 2002 aa33.33■■■□□ 2.93
CAPNS1-206ENST00000588815 EIF3CLB5ME19 914 aaKnown RBP33.32■■■□□ 2.92
CAPNS1-206ENST00000588815 ZNF500O60304 480 aaPredicted RBP33.32■■■□□ 2.92
CAPNS1-206ENST00000588815 NBNO60934 754 aa33.32■■■□□ 2.92
CAPNS1-206ENST00000588815 GFPT2O94808 682 aa33.32■■■□□ 2.92
CAPNS1-206ENST00000588815 IPO7O95373 1038 aaKnown RBP33.32■■■□□ 2.92
CAPNS1-206ENST00000588815 ZNF667Q5HYK9 610 aa33.32■■■□□ 2.92
CAPNS1-206ENST00000588815 VPS36Q86VN1 386 aa33.32■■■□□ 2.92
CAPNS1-206ENST00000588815 ECHDC2Q86YB7 292 aa33.32■■■□□ 2.92
CAPNS1-206ENST00000588815 LRRC52Q8N7C0 313 aa33.32■■■□□ 2.92
CAPNS1-206ENST00000588815 RPS6KC1Q96S38 1066 aa33.32■■■□□ 2.92
CAPNS1-206ENST00000588815 EIF3CQ99613 913 aaKnown RBP33.32■■■□□ 2.92
CAPNS1-206ENST00000588815 KLK14Q9P0G3 267 aa33.32■■■□□ 2.92
CAPNS1-206ENST00000588815 ATP11BQ9Y2G3 1177 aa33.32■■■□□ 2.92
CAPNS1-206ENST00000588815 C9IYK1 514 aa33.31■■■□□ 2.92
CAPNS1-206ENST00000588815 CLTBP09497 229 aa33.31■■■□□ 2.92
CAPNS1-206ENST00000588815 CCDC175P0C221 793 aa33.31■■■□□ 2.92
CAPNS1-206ENST00000588815 P4HA1P13674 534 aa33.31■■■□□ 2.92
CAPNS1-206ENST00000588815 POLR2BP30876 1174 aaKnown RBP33.31■■■□□ 2.92
CAPNS1-206ENST00000588815 YWHAEP62258 255 aaKnown RBP33.31■■■□□ 2.92
CAPNS1-206ENST00000588815 ARID5AQ03989 594 aa33.31■■■□□ 2.92
CAPNS1-206ENST00000588815 SPOPLQ6IQ16 392 aa33.31■■■□□ 2.92
CAPNS1-206ENST00000588815 KAT5Q92993 513 aa33.31■■■□□ 2.92
CAPNS1-206ENST00000588815 AGAP1Q9UPQ3 857 aa33.31■■■□□ 2.92
CAPNS1-206ENST00000588815 CXCL10P02778 98 aa33.31■■■□□ 2.92
CAPNS1-206ENST00000588815 EIF4A3P38919 411 aaKnown RBP33.31■■■□□ 2.92
CAPNS1-206ENST00000588815 FAM189BP81408 668 aa33.31■■■□□ 2.92
CAPNS1-206ENST00000588815 MYO1EQ12965 1108 aa33.31■■■□□ 2.92
CAPNS1-206ENST00000588815 MTF1Q14872 753 aa33.31■■■□□ 2.92
CAPNS1-206ENST00000588815 AGMOQ6ZNB7 445 aa33.31■■■□□ 2.92
CAPNS1-206ENST00000588815 HAUS4Q9H6D7 363 aa33.31■■■□□ 2.92
CAPNS1-206ENST00000588815 RSAD1Q9HA92 442 aa33.31■■■□□ 2.92
CAPNS1-206ENST00000588815 UTP3Q9NQZ2 479 aaKnown RBP eCLIP33.31■■■□□ 2.921e-21■■■■■ 79.2
CAPNS1-206ENST00000588815 TTC3P53804 2025 aa33.3■■■□□ 2.92
CAPNS1-206ENST00000588815 AKR1B10O60218 316 aa33.3■■■□□ 2.92
CAPNS1-206ENST00000588815 CLSTN1O94985 981 aa33.3■■■□□ 2.92
CAPNS1-206ENST00000588815 LCA5LO95447 670 aa33.3■■■□□ 2.92
CAPNS1-206ENST00000588815 KRT83P78385 493 aa33.3■■■□□ 2.92
CAPNS1-206ENST00000588815 GPNMBQ14956 572 aa33.3■■■□□ 2.92
CAPNS1-206ENST00000588815 ASTE1Q2TB18 679 aaPredicted RBP33.3■■■□□ 2.92
CAPNS1-206ENST00000588815 GLRA4Q5JXX5 417 aa33.3■■■□□ 2.92
CAPNS1-206ENST00000588815 ZNF598Q86UK7 904 aaKnown RBP33.3■■■□□ 2.92
CAPNS1-206ENST00000588815 CCAR2Q8N163 923 aaKnown RBP33.3■■■□□ 2.92
CAPNS1-206ENST00000588815 HPDLQ96IR7 371 aa33.3■■■□□ 2.92
CAPNS1-206ENST00000588815 PPP1R10Q96QC0 940 aaKnown RBP33.3■■■□□ 2.92
CAPNS1-206ENST00000588815 CNTN6Q9UQ52 1028 aa33.3■■■□□ 2.92
CAPNS1-206ENST00000588815 ADGRG1Q9Y653 693 aa33.3■■■□□ 2.92
CAPNS1-206ENST00000588815 ANO9A1A5B4 782 aa33.29■■■□□ 2.92
CAPNS1-206ENST00000588815 OFD1O75665 1012 aa33.29■■■□□ 2.92
CAPNS1-206ENST00000588815 PLEKP08567 350 aaPredicted RBP33.29■■■□□ 2.92
CAPNS1-206ENST00000588815 ATF7P17544 494 aaPredicted RBP33.29■■■□□ 2.92
CAPNS1-206ENST00000588815 RFC2P35250 354 aa33.29■■■□□ 2.92
CAPNS1-206ENST00000588815 KIF11P52732 1056 aa33.29■■■□□ 2.92
CAPNS1-206ENST00000588815 TOGARAM2Q6ZUX3 1019 aa33.29■■■□□ 2.92
CAPNS1-206ENST00000588815 CXCL16Q9H2A7 254 aa33.29■■■□□ 2.92
CAPNS1-206ENST00000588815 TMEM39AQ9NV64 488 aa33.29■■■□□ 2.92
CAPNS1-206ENST00000588815 RNF216Q9NWF9 866 aaPredicted RBP33.29■■■□□ 2.92
CAPNS1-206ENST00000588815 PPP2R2CQ9Y2T4 447 aa33.29■■■□□ 2.92
CAPNS1-206ENST00000588815 UMODL1Q5DID0 1318 aa33.28■■■□□ 2.92
CAPNS1-206ENST00000588815 GOLGA6L9A6NEM1 432 aa33.28■■■□□ 2.92
CAPNS1-206ENST00000588815 PTGESO14684 152 aa33.28■■■□□ 2.92
CAPNS1-206ENST00000588815 INPPL1O15357 1258 aa33.28■■■□□ 2.92
CAPNS1-206ENST00000588815 THP07101 528 aa33.28■■■□□ 2.92
CAPNS1-206ENST00000588815 PNPLA4P41247 253 aa33.28■■■□□ 2.92
CAPNS1-206ENST00000588815 BPIFB4P59827 614 aa33.28■■■□□ 2.92
CAPNS1-206ENST00000588815 PTK2Q05397 1052 aa33.28■■■□□ 2.92
CAPNS1-206ENST00000588815 RTN4RL1Q86UN2 441 aaPredicted RBP33.28■■■□□ 2.92
CAPNS1-206ENST00000588815 DBF4BQ8NFT6 615 aa33.28■■■□□ 2.92
CAPNS1-206ENST00000588815 WNT8AQ9H1J5 351 aa33.28■■■□□ 2.92
CAPNS1-206ENST00000588815 ELAC1Q9H777 363 aaKnown RBP33.28■■■□□ 2.92
CAPNS1-206ENST00000588815 ARL5CA6NH57 179 aa33.27■■■□□ 2.92
CAPNS1-206ENST00000588815 LRPAP1P30533 357 aa33.27■■■□□ 2.92
CAPNS1-206ENST00000588815 MLH1P40692 756 aa33.27■■■□□ 2.92
CAPNS1-206ENST00000588815 BMS1Q14692 1282 aaKnown RBP33.27■■■□□ 2.92
CAPNS1-206ENST00000588815 SPA17Q15506 151 aa33.27■■■□□ 2.92
CAPNS1-206ENST00000588815 LRRC26Q2I0M4 334 aa33.27■■■□□ 2.92
CAPNS1-206ENST00000588815 WDR72Q3MJ13 1102 aa33.27■■■□□ 2.92
CAPNS1-206ENST00000588815 TTC39CQ8N584 583 aa33.27■■■□□ 2.92
CAPNS1-206ENST00000588815 ZNF560Q96MR9 790 aa33.27■■■□□ 2.92
CAPNS1-206ENST00000588815 GAD1Q99259 594 aa33.27■■■□□ 2.92
CAPNS1-206ENST00000588815 BCO2Q9BYV7 579 aa33.27■■■□□ 2.92
CAPNS1-206ENST00000588815 CYP3A43Q9HB55 503 aa33.27■■■□□ 2.92
CAPNS1-206ENST00000588815 TUBGCP4Q9UGJ1 667 aa33.27■■■□□ 2.92
CAPNS1-206ENST00000588815 RBAK-RBAKDNI3L0D1 243 aa33.26■■■□□ 2.92
CAPNS1-206ENST00000588815 PNMA6AP0CW24 399 aaPredicted RBP33.26■■■□□ 2.92
CAPNS1-206ENST00000588815 C9orf57Q5W0N0 161 aa33.26■■■□□ 2.92
CAPNS1-206ENST00000588815 UBR7Q8N806 425 aa33.26■■■□□ 2.92
CAPNS1-206ENST00000588815 GSTCDQ8NEC7 633 aa33.26■■■□□ 2.92
CAPNS1-206ENST00000588815 LINC01599Q8WXQ3 324 aa33.26■■■□□ 2.92
CAPNS1-206ENST00000588815 LPPQ93052 612 aa33.26■■■□□ 2.92
CAPNS1-206ENST00000588815 C18orf25Q96B23 403 aaPredicted RBP33.26■■■□□ 2.92
CAPNS1-206ENST00000588815 ZFP42Q96MM3 310 aa33.26■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms