RNA–Protein interactions for RNA: ENST00000588599.5

SNRPD2-207, Transcript of small nuclear ribonucleoprotein D2 polypeptide, humanhuman

TSL 3 BASIC

Gene SNRPD2, Length 805 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD2-207ENST00000588599 CCDC173Q0VFZ6 552 aa12.38□□□□□ -0.43
SNRPD2-207ENST00000588599 FZD5Q13467 585 aa12.38□□□□□ -0.43
SNRPD2-207ENST00000588599 PUM1Q14671 1186 aaKnown RBP eCLIP12.38□□□□□ -0.432e-7■□□□□ 11
SNRPD2-207ENST00000588599 ECM1Q16610 540 aa12.38□□□□□ -0.43
SNRPD2-207ENST00000588599 SLC5A9Q2M3M2 681 aa12.38□□□□□ -0.43
SNRPD2-207ENST00000588599 ZNF528Q3MIS6 628 aa12.38□□□□□ -0.43
SNRPD2-207ENST00000588599 TMEM119Q4V9L6 283 aa12.38□□□□□ -0.43
SNRPD2-207ENST00000588599 ATF7IP2Q5U623 682 aa12.38□□□□□ -0.43
SNRPD2-207ENST00000588599 RTL10Q7L3V2 364 aa12.38□□□□□ -0.43
SNRPD2-207ENST00000588599 DGLUCYQ7Z3D6 616 aa12.38□□□□□ -0.43
SNRPD2-207ENST00000588599 GAS2L3Q86XJ1 694 aa12.38□□□□□ -0.43
SNRPD2-207ENST00000588599 C3orf58Q8NDZ4 430 aa12.38□□□□□ -0.43
SNRPD2-207ENST00000588599 DEPTORQ8TB45 409 aa12.38□□□□□ -0.43
SNRPD2-207ENST00000588599 CALML4Q96GE6 196 aa12.38□□□□□ -0.43
SNRPD2-207ENST00000588599 DDX27Q96GQ7 796 aaKnown RBP12.38□□□□□ -0.43
SNRPD2-207ENST00000588599 PNMA5Q96PV4 448 aa12.38□□□□□ -0.43
SNRPD2-207ENST00000588599 PPP1R9BQ96SB3 815 aa12.38□□□□□ -0.43
SNRPD2-207ENST00000588599 GOLGA2P5Q9HBQ8 144 aa12.38□□□□□ -0.43
SNRPD2-207ENST00000588599 LTB4R2Q9NPC1 389 aa12.38□□□□□ -0.43
SNRPD2-207ENST00000588599 CCDC39Q9UFE4 941 aa12.38□□□□□ -0.43
SNRPD2-207ENST00000588599 FBXO4Q9UKT5 387 aa12.38□□□□□ -0.43
SNRPD2-207ENST00000588599 KCNH3Q9ULD8 1083 aa12.38□□□□□ -0.43
SNRPD2-207ENST00000588599 MRPS23Q9Y3D9 190 aaKnown RBP12.38□□□□□ -0.43
SNRPD2-207ENST00000588599 BACE2Q9Y5Z0 518 aa12.38□□□□□ -0.43
SNRPD2-207ENST00000588599 PATJQ8NI35 1801 aa12.38□□□□□ -0.43
SNRPD2-207ENST00000588599 F5P12259 2224 aa12.38□□□□□ -0.43
SNRPD2-207ENST00000588599 CITO14578 2027 aa12.37□□□□□ -0.43
SNRPD2-207ENST00000588599 CEP250Q9BV73 2442 aa12.37□□□□□ -0.43
SNRPD2-207ENST00000588599 DMXL1Q9Y485 3027 aa12.37□□□□□ -0.43
SNRPD2-207ENST00000588599 SHISA7A6NL88 538 aa12.37□□□□□ -0.43
SNRPD2-207ENST00000588599 K7ERI5 159 aa12.37□□□□□ -0.43
SNRPD2-207ENST00000588599 KINO60870 393 aaKnown RBP12.37□□□□□ -0.43
SNRPD2-207ENST00000588599 ABLIM3O94929 683 aa12.37□□□□□ -0.43
SNRPD2-207ENST00000588599 LETM1O95202 739 aaPredicted RBP12.37□□□□□ -0.43
SNRPD2-207ENST00000588599 RHOP08100 348 aa12.37□□□□□ -0.43
SNRPD2-207ENST00000588599 PTPN2P17706 415 aa12.37□□□□□ -0.43
SNRPD2-207ENST00000588599 PFKPQ01813 784 aa12.37□□□□□ -0.43
SNRPD2-207ENST00000588599 SOX4Q06945 474 aaPredicted RBP12.37□□□□□ -0.43
SNRPD2-207ENST00000588599 PPP2R5AQ15172 486 aa12.37□□□□□ -0.43
SNRPD2-207ENST00000588599 DCAF4L1Q3SXM0 396 aa12.37□□□□□ -0.43
SNRPD2-207ENST00000588599 ZBTB41Q5SVQ8 909 aa12.37□□□□□ -0.43
SNRPD2-207ENST00000588599 TANGO2Q6ICL3 276 aa12.37□□□□□ -0.43
SNRPD2-207ENST00000588599 ALKAL1Q6UXT8 129 aa12.37□□□□□ -0.43
SNRPD2-207ENST00000588599 ANKS3Q6ZW76 656 aa12.37□□□□□ -0.43
SNRPD2-207ENST00000588599 CEP120Q8N960 986 aa12.37□□□□□ -0.43
SNRPD2-207ENST00000588599 ZNF461Q8TAF7 563 aa12.37□□□□□ -0.43
SNRPD2-207ENST00000588599 CLDN23Q96B33 292 aa12.37□□□□□ -0.43
SNRPD2-207ENST00000588599 CDK5RAP3Q96JB5 506 aa12.37□□□□□ -0.43
SNRPD2-207ENST00000588599 NELL2Q99435 816 aa12.37□□□□□ -0.43
SNRPD2-207ENST00000588599 FAM13BQ9NYF5 915 aa12.37□□□□□ -0.43
SNRPD2-207ENST00000588599 DLL3Q9NYJ7 618 aa12.37□□□□□ -0.43
SNRPD2-207ENST00000588599 CACNA1AO00555 2505 aa12.37□□□□□ -0.43
SNRPD2-207ENST00000588599 GOLGA6L4A6NEF3 574 aa12.36□□□□□ -0.43
SNRPD2-207ENST00000588599 NRG2O14511 850 aaPredicted RBP12.36□□□□□ -0.43
SNRPD2-207ENST00000588599 TRAPPC3O43617 180 aa12.36□□□□□ -0.43
SNRPD2-207ENST00000588599 ECI2O75521 394 aa12.36□□□□□ -0.43
SNRPD2-207ENST00000588599 PLCG1P19174 1290 aa12.36□□□□□ -0.43
SNRPD2-207ENST00000588599 TARSP26639 723 aaKnown RBP12.36□□□□□ -0.43
SNRPD2-207ENST00000588599 EFNA5P52803 228 aa12.36□□□□□ -0.43
SNRPD2-207ENST00000588599 OSTNP61366 133 aa12.36□□□□□ -0.43
SNRPD2-207ENST00000588599 ROR1Q01973 937 aa12.36□□□□□ -0.43
SNRPD2-207ENST00000588599 KARSQ15046 597 aaKnown RBP12.36□□□□□ -0.43
SNRPD2-207ENST00000588599 ZSCAN23Q3MJ62 389 aa12.36□□□□□ -0.43
SNRPD2-207ENST00000588599 HS1BP3Q53T59 392 aa12.36□□□□□ -0.43
SNRPD2-207ENST00000588599 XKR4Q5GH76 650 aa12.36□□□□□ -0.43
SNRPD2-207ENST00000588599 VARS2Q5ST30 1063 aaKnown RBP12.36□□□□□ -0.43
SNRPD2-207ENST00000588599 SLC8B1Q6J4K2 584 aa12.36□□□□□ -0.43
SNRPD2-207ENST00000588599 TSSK4Q6SA08 328 aa12.36□□□□□ -0.43
SNRPD2-207ENST00000588599 CCDC73Q6ZRK6 1079 aa12.36□□□□□ -0.43
SNRPD2-207ENST00000588599 FSIP1Q8NA03 581 aa12.36□□□□□ -0.43
SNRPD2-207ENST00000588599 NELL1Q92832 810 aa12.36□□□□□ -0.43
SNRPD2-207ENST00000588599 BORCS6Q96GS4 357 aa12.36□□□□□ -0.43
SNRPD2-207ENST00000588599 IFT74Q96LB3 600 aa12.36□□□□□ -0.43
SNRPD2-207ENST00000588599 UROC1Q96N76 676 aa12.36□□□□□ -0.43
SNRPD2-207ENST00000588599 ZMAT2Q96NC0 199 aaKnown RBP12.36□□□□□ -0.43
SNRPD2-207ENST00000588599 PYM1Q9BRP8 204 aaKnown RBP12.36□□□□□ -0.43
SNRPD2-207ENST00000588599 BHMT2Q9H2M3 363 aa12.36□□□□□ -0.43
SNRPD2-207ENST00000588599 PTPRHQ9HD43 1115 aa12.36□□□□□ -0.43
SNRPD2-207ENST00000588599 AVENQ9NQS1 362 aaPredicted RBP12.36□□□□□ -0.43
SNRPD2-207ENST00000588599 HEBP1Q9NRV9 189 aa12.36□□□□□ -0.43
SNRPD2-207ENST00000588599 DDX19AQ9NUU7 478 aaKnown RBP12.36□□□□□ -0.43
SNRPD2-207ENST00000588599 GDE1Q9NZC3 331 aa12.36□□□□□ -0.43
SNRPD2-207ENST00000588599 STK17AQ9UEE5 414 aa12.36□□□□□ -0.43
SNRPD2-207ENST00000588599 KIAA1024Q9UPX6 916 aa12.36□□□□□ -0.43
SNRPD2-207ENST00000588599 HPSEQ9Y251 543 aa12.36□□□□□ -0.43
SNRPD2-207ENST00000588599 TNFSF13BQ9Y275 285 aa12.36□□□□□ -0.43
SNRPD2-207ENST00000588599 ARHGEF37A1IGU5 675 aa12.35□□□□□ -0.43
SNRPD2-207ENST00000588599 WDR27A2RRH5 827 aa12.35□□□□□ -0.43
SNRPD2-207ENST00000588599 TBC1D4O60343 1298 aa12.35□□□□□ -0.43
SNRPD2-207ENST00000588599 SEC24AO95486 1093 aa12.35□□□□□ -0.43
SNRPD2-207ENST00000588599 PFKFB1P16118 471 aa12.35□□□□□ -0.43
SNRPD2-207ENST00000588599 ELF1P32519 619 aa12.35□□□□□ -0.43
SNRPD2-207ENST00000588599 ARPP19P56211 112 aa12.35□□□□□ -0.43
SNRPD2-207ENST00000588599 UBE2HP62256 183 aa12.35□□□□□ -0.43
SNRPD2-207ENST00000588599 MRPL58Q14197 206 aaKnown RBP12.35□□□□□ -0.43
SNRPD2-207ENST00000588599 RSPO4Q2I0M5 234 aaPredicted RBP12.35□□□□□ -0.43
SNRPD2-207ENST00000588599 PRSS36Q5K4E3 855 aa12.35□□□□□ -0.43
SNRPD2-207ENST00000588599 RRAGBQ5VZM2 374 aa12.35□□□□□ -0.43
SNRPD2-207ENST00000588599 LRSAM1Q6UWE0 723 aa12.35□□□□□ -0.43
SNRPD2-207ENST00000588599 TPRG1Q6ZUI0 275 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms