RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 POF1BQ8WVV4 589 aa9.78□□□□□ -0.84
CIRBP-218ENST00000588344 MRPL38Q96DV4 380 aaKnown RBP9.78□□□□□ -0.84
CIRBP-218ENST00000588344 EEF2KMTQ96G04 330 aa9.78□□□□□ -0.84
CIRBP-218ENST00000588344 SUSD3Q96L08 255 aa9.78□□□□□ -0.84
CIRBP-218ENST00000588344 GAS2L1Q99501 681 aaPredicted RBP9.78□□□□□ -0.84
CIRBP-218ENST00000588344 POP1Q99575 1024 aaKnown RBP9.78□□□□□ -0.84
CIRBP-218ENST00000588344 MTMR12Q9C0I1 747 aa9.78□□□□□ -0.84
CIRBP-218ENST00000588344 CXCL16Q9H2A7 254 aa9.78□□□□□ -0.84
CIRBP-218ENST00000588344 TTYH1Q9H313 450 aaPredicted RBP9.78□□□□□ -0.84
CIRBP-218ENST00000588344 TMEM8AQ9HCN3 771 aa9.78□□□□□ -0.84
CIRBP-218ENST00000588344 TLR9Q9NR96 1032 aa9.78□□□□□ -0.84
CIRBP-218ENST00000588344 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.78□□□□□ -0.843e-7■■□□□ 13.8
CIRBP-218ENST00000588344 MRPL17Q9NRX2 175 aaKnown RBP9.78□□□□□ -0.84
CIRBP-218ENST00000588344 TUBGCP4Q9UGJ1 667 aa9.78□□□□□ -0.84
CIRBP-218ENST00000588344 DSEQ9UL01 958 aa9.78□□□□□ -0.84
CIRBP-218ENST00000588344 MTUS1Q9ULD2 1270 aa9.78□□□□□ -0.84
CIRBP-218ENST00000588344 AGAP1Q9UPQ3 857 aa9.78□□□□□ -0.84
CIRBP-218ENST00000588344 NFE2L3Q9Y4A8 694 aa9.78□□□□□ -0.84
CIRBP-218ENST00000588344 BECN2A8MW95 431 aa9.77□□□□□ -0.85
CIRBP-218ENST00000588344 NCK2O43639 380 aa9.77□□□□□ -0.85
CIRBP-218ENST00000588344 KIF4AO95239 1232 aa9.77□□□□□ -0.85
CIRBP-218ENST00000588344 EFEMP2O95967 443 aa9.77□□□□□ -0.85
CIRBP-218ENST00000588344 ITGB3P05106 788 aa9.77□□□□□ -0.85
CIRBP-218ENST00000588344 KRT19P08727 400 aa9.77□□□□□ -0.85
CIRBP-218ENST00000588344 PBX3P40426 434 aa9.77□□□□□ -0.85
CIRBP-218ENST00000588344 AARSP49588 968 aaKnown RBP eCLIP9.77□□□□□ -0.85
CIRBP-218ENST00000588344 ZNF165P49910 485 aa9.77□□□□□ -0.85
CIRBP-218ENST00000588344 TPM4P67936 248 aa9.77□□□□□ -0.85
CIRBP-218ENST00000588344 BIRC3Q13489 604 aa9.77□□□□□ -0.85
CIRBP-218ENST00000588344 NCOA4Q13772 614 aa9.77□□□□□ -0.85
CIRBP-218ENST00000588344 SMC1AQ14683 1233 aaKnown RBP9.77□□□□□ -0.85
CIRBP-218ENST00000588344 GRIN2CQ14957 1233 aa9.77□□□□□ -0.85
CIRBP-218ENST00000588344 ZACNQ401N2 412 aa9.77□□□□□ -0.85
CIRBP-218ENST00000588344 ANO6Q4KMQ2 910 aa9.77□□□□□ -0.85
CIRBP-218ENST00000588344 TCERG1LQ5VWI1 586 aa9.77□□□□□ -0.85
CIRBP-218ENST00000588344 SMYD5Q6GMV2 418 aa9.77□□□□□ -0.85
CIRBP-218ENST00000588344 FUT10Q6P4F1 479 aa9.77□□□□□ -0.85
CIRBP-218ENST00000588344 DSTYKQ6XUX3 929 aa9.77□□□□□ -0.85
CIRBP-218ENST00000588344 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.77□□□□□ -0.85
CIRBP-218ENST00000588344 ANKS3Q6ZW76 656 aa9.77□□□□□ -0.85
CIRBP-218ENST00000588344 METTL23Q86XA0 190 aa9.77□□□□□ -0.85
CIRBP-218ENST00000588344 TRIM59Q8IWR1 403 aa9.77□□□□□ -0.85
CIRBP-218ENST00000588344 RNF168Q8IYW5 571 aaPredicted RBP9.77□□□□□ -0.85
CIRBP-218ENST00000588344 VPS52Q8N1B4 723 aa9.77□□□□□ -0.85
CIRBP-218ENST00000588344 DEFB123Q8N688 67 aa9.77□□□□□ -0.85
CIRBP-218ENST00000588344 MRPL43Q8N983 215 aaKnown RBP9.77□□□□□ -0.85
CIRBP-218ENST00000588344 OR5B17Q8NGF7 314 aa9.77□□□□□ -0.85
CIRBP-218ENST00000588344 SPATA18Q8TC71 538 aa9.77□□□□□ -0.85
CIRBP-218ENST00000588344 MICAL1Q8TDZ2 1067 aa9.77□□□□□ -0.85
CIRBP-218ENST00000588344 ZNF516Q92618 1163 aa9.77□□□□□ -0.85
CIRBP-218ENST00000588344 PAAF1Q9BRP4 392 aa9.77□□□□□ -0.85
CIRBP-218ENST00000588344 TTPALQ9BTX7 342 aa9.77□□□□□ -0.85
CIRBP-218ENST00000588344 FUCA2Q9BTY2 467 aa9.77□□□□□ -0.85
CIRBP-218ENST00000588344 EMILIN2Q9BXX0 1053 aa9.77□□□□□ -0.85
CIRBP-218ENST00000588344 IMPG2Q9BZV3 1241 aa9.77□□□□□ -0.85
CIRBP-218ENST00000588344 DNAJC25Q9H1X3 360 aa9.77□□□□□ -0.85
CIRBP-218ENST00000588344 VRTNQ9H8Y1 702 aa9.77□□□□□ -0.85
CIRBP-218ENST00000588344 CERS4Q9HA82 394 aa9.77□□□□□ -0.85
CIRBP-218ENST00000588344 GOLGA2P5Q9HBQ8 144 aa9.77□□□□□ -0.85
CIRBP-218ENST00000588344 CHST7Q9NS84 486 aa9.77□□□□□ -0.85
CIRBP-218ENST00000588344 MARCH5Q9NX47 278 aa9.77□□□□□ -0.85
CIRBP-218ENST00000588344 GDAP2Q9NXN4 497 aa9.77□□□□□ -0.85
CIRBP-218ENST00000588344 HCSTQ9UBK5 93 aa9.77□□□□□ -0.85
CIRBP-218ENST00000588344 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.77□□□□□ -0.85
CIRBP-218ENST00000588344 IRAK3Q9Y616 596 aa9.77□□□□□ -0.85
CIRBP-218ENST00000588344 MYH11P35749 1972 aa9.76□□□□□ -0.85
CIRBP-218ENST00000588344 LRRC10BA6NIK2 292 aa9.76□□□□□ -0.85
CIRBP-218ENST00000588344 KPNA7A9QM74 516 aa9.76□□□□□ -0.85
CIRBP-218ENST00000588344 H7C4K7 107 aa9.76□□□□□ -0.85
CIRBP-218ENST00000588344 M0QZQ0 153 aa9.76□□□□□ -0.85
CIRBP-218ENST00000588344 GRM6O15303 877 aa9.76□□□□□ -0.85
CIRBP-218ENST00000588344 B4GALT3O60512 393 aa9.76□□□□□ -0.85
CIRBP-218ENST00000588344 CXCL14O95715 111 aa9.76□□□□□ -0.85
CIRBP-218ENST00000588344 AFPP02771 609 aaKnown RBP9.76□□□□□ -0.85
CIRBP-218ENST00000588344 URODP06132 367 aa9.76□□□□□ -0.85
CIRBP-218ENST00000588344 ODC1P11926 461 aa9.76□□□□□ -0.85
CIRBP-218ENST00000588344 TYMPP19971 482 aa9.76□□□□□ -0.85
CIRBP-218ENST00000588344 CDK11BP21127 795 aaKnown RBP9.76□□□□□ -0.85
CIRBP-218ENST00000588344 FGFR3P22607 806 aa9.76□□□□□ -0.85
CIRBP-218ENST00000588344 POLR2BP30876 1174 aaKnown RBP9.76□□□□□ -0.85
CIRBP-218ENST00000588344 MTIF2P46199 727 aaKnown RBP9.76□□□□□ -0.85
CIRBP-218ENST00000588344 MXI1P50539 228 aa9.76□□□□□ -0.85
CIRBP-218ENST00000588344 WNT7BP56706 349 aa9.76□□□□□ -0.85
CIRBP-218ENST00000588344 DLG4P78352 724 aa9.76□□□□□ -0.85
CIRBP-218ENST00000588344 DSG1Q02413 1049 aa9.76□□□□□ -0.85
CIRBP-218ENST00000588344 TIGD5Q53EQ6 642 aa9.76□□□□□ -0.85
CIRBP-218ENST00000588344 TCP11X2Q5H9J9 407 aa9.76□□□□□ -0.85
CIRBP-218ENST00000588344 DCAF17Q5H9S7 520 aaPredicted RBP9.76□□□□□ -0.85
CIRBP-218ENST00000588344 WDR44Q5JSH3 913 aa9.76□□□□□ -0.85
CIRBP-218ENST00000588344 FAM171A1Q5VUB5 890 aa9.76□□□□□ -0.85
CIRBP-218ENST00000588344 C15orf39Q6ZRI6 1047 aa9.76□□□□□ -0.85
CIRBP-218ENST00000588344 CREBRFQ8IUR6 639 aa9.76□□□□□ -0.85
CIRBP-218ENST00000588344 TMEM86AQ8N2M4 240 aa9.76□□□□□ -0.85
CIRBP-218ENST00000588344 CXorf38Q8TB03 319 aa9.76□□□□□ -0.85
CIRBP-218ENST00000588344 PLEKHO2Q8TD55 490 aa9.76□□□□□ -0.85
CIRBP-218ENST00000588344 SLC35C1Q96A29 364 aa9.76□□□□□ -0.85
CIRBP-218ENST00000588344 HPDLQ96IR7 371 aa9.76□□□□□ -0.85
CIRBP-218ENST00000588344 CNOT6LQ96LI5 555 aaKnown RBP9.76□□□□□ -0.85
CIRBP-218ENST00000588344 MED15Q96RN5 788 aa9.76□□□□□ -0.85
CIRBP-218ENST00000588344 CDCA3Q99618 268 aaPredicted RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms