RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 DNAJC25Q9H1X3 360 aa15.12■□□□□ 0.01
CLPTM1-208ENST00000588274 CRISPLD1Q9H336 500 aa15.12■□□□□ 0.01
CLPTM1-208ENST00000588274 TMEM134Q9H6X4 195 aa15.12■□□□□ 0.01
CLPTM1-208ENST00000588274 CYP4F11Q9HBI6 524 aa15.12■□□□□ 0.01
CLPTM1-208ENST00000588274 ZFP14Q9HCL3 533 aa15.12■□□□□ 0.01
CLPTM1-208ENST00000588274 TOPORSQ9NS56 1045 aaPredicted RBP15.12■□□□□ 0.01
CLPTM1-208ENST00000588274 TUBGCP4Q9UGJ1 667 aa15.12■□□□□ 0.01
CLPTM1-208ENST00000588274 NDRG2Q9UN36 371 aaKnown RBP15.12■□□□□ 0.01
CLPTM1-208ENST00000588274 CITO14578 2027 aa15.12■□□□□ 0.01
CLPTM1-208ENST00000588274 KIF26AQ9ULI4 1882 aaPredicted RBP15.12■□□□□ 0.01
CLPTM1-208ENST00000588274 K7ERI5 159 aa15.11■□□□□ 0.01
CLPTM1-208ENST00000588274 PRRG1O14668 218 aa15.11■□□□□ 0.01
CLPTM1-208ENST00000588274 NCAM2O15394 837 aa15.11■□□□□ 0.01
CLPTM1-208ENST00000588274 HIP1RO75146 1068 aa15.11■□□□□ 0.01
CLPTM1-208ENST00000588274 KRT37O76014 449 aa15.11■□□□□ 0.01
CLPTM1-208ENST00000588274 MCF2P10911 925 aa15.11■□□□□ 0.01
CLPTM1-208ENST00000588274 CHRNB1P11230 501 aa15.11■□□□□ 0.01
CLPTM1-208ENST00000588274 GJA1P17302 382 aa15.11■□□□□ 0.01
CLPTM1-208ENST00000588274 PEX3P56589 373 aa15.11■□□□□ 0.01
CLPTM1-208ENST00000588274 DMWDQ09019 674 aa15.11■□□□□ 0.01
CLPTM1-208ENST00000588274 TRIM29Q14134 588 aa15.11■□□□□ 0.01
CLPTM1-208ENST00000588274 TTC38Q5R3I4 469 aa15.11■□□□□ 0.01
CLPTM1-208ENST00000588274 RNF19BQ6ZMZ0 732 aa15.11■□□□□ 0.01
CLPTM1-208ENST00000588274 SHKBP1Q8TBC3 707 aa15.11■□□□□ 0.01
CLPTM1-208ENST00000588274 IFT74Q96LB3 600 aa15.11■□□□□ 0.01
CLPTM1-208ENST00000588274 IER2Q9BTL4 223 aa15.11■□□□□ 0.01
CLPTM1-208ENST00000588274 MMTAG2Q9BU76 263 aaKnown RBP15.11■□□□□ 0.01
CLPTM1-208ENST00000588274 MKNK1Q9BUB5 465 aa15.11■□□□□ 0.01
CLPTM1-208ENST00000588274 TRMT61BQ9BVS5 477 aaKnown RBP15.11■□□□□ 0.01
CLPTM1-208ENST00000588274 CCDC94Q9BW85 323 aaPredicted RBP15.11■□□□□ 0.01
CLPTM1-208ENST00000588274 HAPLN2Q9GZV7 340 aa15.11■□□□□ 0.01
CLPTM1-208ENST00000588274 FOXP1Q9H334 677 aaPredicted RBP15.11■□□□□ 0.01
CLPTM1-208ENST00000588274 BRD9Q9H8M2 597 aa15.11■□□□□ 0.01
CLPTM1-208ENST00000588274 DDX19AQ9NUU7 478 aaKnown RBP15.11■□□□□ 0.01
CLPTM1-208ENST00000588274 SLC38A7Q9NVC3 462 aa15.11■□□□□ 0.01
CLPTM1-208ENST00000588274 AFF4Q9UHB7 1163 aaKnown RBP15.11■□□□□ 0.01
CLPTM1-208ENST00000588274 KIAA1024Q9UPX6 916 aa15.11■□□□□ 0.01
CLPTM1-208ENST00000588274 MRPS17Q9Y2R5 130 aaKnown RBP15.11■□□□□ 0.01
CLPTM1-208ENST00000588274 PIAS3Q9Y6X2 628 aa15.11■□□□□ 0.01
CLPTM1-208ENST00000588274 MAP1BP46821 2468 aaKnown RBP15.1■□□□□ 0.01
CLPTM1-208ENST00000588274 PP2D1A8MPX8 630 aa15.1■□□□□ 0.01
CLPTM1-208ENST00000588274 E9PMD0 336 aa15.1■□□□□ 0.01
CLPTM1-208ENST00000588274 PSMC3P17980 439 aa15.1■□□□□ 0.01
CLPTM1-208ENST00000588274 HOXC13P31276 330 aa15.1■□□□□ 0.01
CLPTM1-208ENST00000588274 RPL9P32969 192 aaKnown RBP15.1■□□□□ 0.01
CLPTM1-208ENST00000588274 CCT6AP40227 531 aaKnown RBP15.1■□□□□ 0.01
CLPTM1-208ENST00000588274 AARSP49588 968 aaKnown RBP eCLIP15.1■□□□□ 0.01
CLPTM1-208ENST00000588274 TOB1P50616 345 aaPredicted RBP15.1■□□□□ 0.01
CLPTM1-208ENST00000588274 ARPP19P56211 112 aa15.1■□□□□ 0.01
CLPTM1-208ENST00000588274 SATB1Q01826 763 aa15.1■□□□□ 0.01
CLPTM1-208ENST00000588274 TWF1Q12792 350 aa15.1■□□□□ 0.01
CLPTM1-208ENST00000588274 IL17AQ16552 155 aa15.1■□□□□ 0.01
CLPTM1-208ENST00000588274 SLC10A6Q3KNW5 377 aa15.1■□□□□ 0.01
CLPTM1-208ENST00000588274 MPZL3Q6UWV2 235 aa15.1■□□□□ 0.01
CLPTM1-208ENST00000588274 PDZD4Q76G19 769 aaPredicted RBP15.1■□□□□ 0.01
CLPTM1-208ENST00000588274 ZSCAN18Q8TBC5 510 aaPredicted RBP15.1■□□□□ 0.01
CLPTM1-208ENST00000588274 DEPDC1BQ8WUY9 529 aa15.1■□□□□ 0.01
CLPTM1-208ENST00000588274 FAM3CQ92520 227 aa15.1■□□□□ 0.01
CLPTM1-208ENST00000588274 DDX12PQ92771 950 aa15.1■□□□□ 0.01
CLPTM1-208ENST00000588274 ZBTB45Q96K62 511 aaPredicted RBP15.1■□□□□ 0.01
CLPTM1-208ENST00000588274 MRPL4Q9BYD3 311 aaKnown RBP15.1■□□□□ 0.01
CLPTM1-208ENST00000588274 C2orf42Q9NWW7 574 aa15.1■□□□□ 0.01
CLPTM1-208ENST00000588274 YIPF1Q9Y548 306 aa15.1■□□□□ 0.01
CLPTM1-208ENST00000588274 PRR5-ARHGAP8B1AHC4 643 aa15.09■□□□□ 0.01
CLPTM1-208ENST00000588274 K7ESF4 209 aa15.09■□□□□ 0.01
CLPTM1-208ENST00000588274 M0QZQ0 153 aa15.09■□□□□ 0.01
CLPTM1-208ENST00000588274 MAN2B1O00754 1011 aa15.09■□□□□ 0.01
CLPTM1-208ENST00000588274 ZNF197O14709 1029 aa15.09■□□□□ 0.01
CLPTM1-208ENST00000588274 PAPSS2O95340 614 aaPredicted RBP15.09■□□□□ 0.01
CLPTM1-208ENST00000588274 GDI1P31150 447 aa15.09■□□□□ 0.01
CLPTM1-208ENST00000588274 YARSP54577 528 aaKnown RBP15.09■□□□□ 0.01
CLPTM1-208ENST00000588274 ARHGAP8P85298 464 aa15.09■□□□□ 0.01
CLPTM1-208ENST00000588274 FCHO2Q0JRZ9 810 aa15.09■□□□□ 0.01
CLPTM1-208ENST00000588274 TEAD2Q15562 447 aa15.09■□□□□ 0.01
CLPTM1-208ENST00000588274 CTXN3Q4LDR2 81 aa15.09■□□□□ 0.01
CLPTM1-208ENST00000588274 SEZ6Q53EL9 994 aa15.09■□□□□ 0.01
CLPTM1-208ENST00000588274 STXBP5Q5T5C0 1151 aa15.09■□□□□ 0.01
CLPTM1-208ENST00000588274 ZNF280DQ6N043 979 aa15.09■□□□□ 0.01
CLPTM1-208ENST00000588274 C1orf186Q6ZWK4 172 aa15.09■□□□□ 0.01
CLPTM1-208ENST00000588274 FBXO18Q8NFZ0 1043 aa15.09■□□□□ 0.01
CLPTM1-208ENST00000588274 IRF7Q92985 503 aa15.09■□□□□ 0.01
CLPTM1-208ENST00000588274 TBC1D32Q96NH3 1257 aa15.09■□□□□ 0.01
CLPTM1-208ENST00000588274 LRRC3BQ96PB8 259 aa15.09■□□□□ 0.01
CLPTM1-208ENST00000588274 RTKNQ9BST9 563 aa15.09■□□□□ 0.01
CLPTM1-208ENST00000588274 LRWD1Q9UFC0 647 aa15.09■□□□□ 0.01
CLPTM1-208ENST00000588274 CDV3Q9UKY7 258 aaKnown RBP15.09■□□□□ 0.01
CLPTM1-208ENST00000588274 PCDHB8Q9UN66 801 aa15.09■□□□□ 0.01
CLPTM1-208ENST00000588274 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.09■□□□□ 0.01
CLPTM1-208ENST00000588274 NUP210Q8TEM1 1887 aaPredicted RBP15.08■□□□□ 0.01
CLPTM1-208ENST00000588274 DCDC2BA2VCK2 349 aa15.08■□□□□ 0
CLPTM1-208ENST00000588274 CCDC169A6NNP5 214 aa15.08■□□□□ 0
CLPTM1-208ENST00000588274 H7C4K7 107 aa15.08■□□□□ 0
CLPTM1-208ENST00000588274 FAM189A1O60320 539 aa15.08■□□□□ 0
CLPTM1-208ENST00000588274 OAZ2O95190 189 aa15.08■□□□□ 0
CLPTM1-208ENST00000588274 ADRB1P08588 477 aa15.08■□□□□ 0
CLPTM1-208ENST00000588274 OR4Q2P0C623 313 aa15.08■□□□□ 0
CLPTM1-208ENST00000588274 ELF1P32519 619 aa15.08■□□□□ 0
CLPTM1-208ENST00000588274 TRAPPC10P48553 1259 aa15.08■□□□□ 0
CLPTM1-208ENST00000588274 CCR3P51677 355 aa15.08■□□□□ 0
CLPTM1-208ENST00000588274 NEK4P51957 841 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms