RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 MAFFQ9ULX9 164 aa15.38■□□□□ 0.05
DNMT1-213ENST00000587604 INSL5Q9Y5Q6 135 aa15.38■□□□□ 0.05
DNMT1-213ENST00000587604 PDCD11Q14690 1871 aaKnown RBP15.37■□□□□ 0.05
DNMT1-213ENST00000587604 MED19A0JLT2 244 aaPredicted RBP15.37■□□□□ 0.05
DNMT1-213ENST00000587604 SHISA7A6NL88 538 aa15.37■□□□□ 0.05
DNMT1-213ENST00000587604 MAN2B1O00754 1011 aa15.37■□□□□ 0.05
DNMT1-213ENST00000587604 LILRB5O75023 590 aa15.37■□□□□ 0.05
DNMT1-213ENST00000587604 U2AF2P26368 475 aaKnown RBP eCLIP15.37■□□□□ 0.05
DNMT1-213ENST00000587604 TOB1P50616 345 aaPredicted RBP15.37■□□□□ 0.05
DNMT1-213ENST00000587604 MAPK7Q13164 816 aa15.37■□□□□ 0.05
DNMT1-213ENST00000587604 IQCEQ6IPM2 695 aa15.37■□□□□ 0.05
DNMT1-213ENST00000587604 PDZD4Q76G19 769 aaPredicted RBP15.37■□□□□ 0.05
DNMT1-213ENST00000587604 ELMOD1Q8N336 334 aa15.37■□□□□ 0.05
DNMT1-213ENST00000587604 GPR161Q8N6U8 529 aaKnown RBP15.37■□□□□ 0.05
DNMT1-213ENST00000587604 APPL2Q8NEU8 664 aa15.37■□□□□ 0.05
DNMT1-213ENST00000587604 C18orf25Q96B23 403 aaPredicted RBP15.37■□□□□ 0.05
DNMT1-213ENST00000587604 TCEAL4Q96EI5 215 aa15.37■□□□□ 0.05
DNMT1-213ENST00000587604 ZSCAN31Q96LW9 406 aaPredicted RBP15.37■□□□□ 0.05
DNMT1-213ENST00000587604 ZNF512Q96ME7 567 aaPredicted RBP15.37■□□□□ 0.05
DNMT1-213ENST00000587604 RUSC1Q9BVN2 902 aa15.37■□□□□ 0.05
DNMT1-213ENST00000587604 TRMT61BQ9BVS5 477 aaKnown RBP15.37■□□□□ 0.05
DNMT1-213ENST00000587604 TIPINQ9BVW5 301 aa15.37■□□□□ 0.05
DNMT1-213ENST00000587604 FAM126AQ9BYI3 521 aaPredicted RBP15.37■□□□□ 0.05
DNMT1-213ENST00000587604 BRD9Q9H8M2 597 aa15.37■□□□□ 0.05
DNMT1-213ENST00000587604 TRPV5Q9NQA5 729 aa15.37■□□□□ 0.05
DNMT1-213ENST00000587604 NCDNQ9UBB6 729 aa15.37■□□□□ 0.05
DNMT1-213ENST00000587604 AFF4Q9UHB7 1163 aaKnown RBP15.37■□□□□ 0.05
DNMT1-213ENST00000587604 KCNG1Q9UIX4 513 aa15.37■□□□□ 0.05
DNMT1-213ENST00000587604 LAD1O00515 517 aa15.36■□□□□ 0.05
DNMT1-213ENST00000587604 SLC16A4O15374 487 aa15.36■□□□□ 0.05
DNMT1-213ENST00000587604 MEFVO15553 781 aaPredicted RBP15.36■□□□□ 0.05
DNMT1-213ENST00000587604 TOM1L1O75674 476 aa15.36■□□□□ 0.05
DNMT1-213ENST00000587604 NEFLP07196 543 aa15.36■□□□□ 0.05
DNMT1-213ENST00000587604 CCR2P41597 374 aa15.36■□□□□ 0.05
DNMT1-213ENST00000587604 SLC10A6Q3KNW5 377 aa15.36■□□□□ 0.05
DNMT1-213ENST00000587604 ZNF280DQ6N043 979 aa15.36■□□□□ 0.05
DNMT1-213ENST00000587604 MAMSTRQ6ZN01 415 aa15.36■□□□□ 0.05
DNMT1-213ENST00000587604 ZNF687Q8N1G0 1237 aa15.36■□□□□ 0.05
DNMT1-213ENST00000587604 LEMD2Q8NC56 503 aa15.36■□□□□ 0.05
DNMT1-213ENST00000587604 DDX12PQ92771 950 aa15.36■□□□□ 0.05
DNMT1-213ENST00000587604 SMARCD2Q92925 531 aa15.36■□□□□ 0.05
DNMT1-213ENST00000587604 IRF7Q92985 503 aa15.36■□□□□ 0.05
DNMT1-213ENST00000587604 SECISBP2LQ93073 1101 aaKnown RBP15.36■□□□□ 0.05
DNMT1-213ENST00000587604 ZBTB45Q96K62 511 aaPredicted RBP15.36■□□□□ 0.05
DNMT1-213ENST00000587604 TBC1D32Q96NH3 1257 aa15.36■□□□□ 0.05
DNMT1-213ENST00000587604 ASB16Q96NS5 453 aa15.36■□□□□ 0.05
DNMT1-213ENST00000587604 EPC1Q9H2F5 836 aa15.36■□□□□ 0.05
DNMT1-213ENST00000587604 PRMT8Q9NR22 394 aaPredicted RBP15.36■□□□□ 0.05
DNMT1-213ENST00000587604 PCDHB6Q9Y5E3 794 aa15.36■□□□□ 0.05
DNMT1-213ENST00000587604 SFI1A8K8P3 1242 aa15.35■□□□□ 0.05
DNMT1-213ENST00000587604 PP2D1A8MPX8 630 aa15.35■□□□□ 0.05
DNMT1-213ENST00000587604 SEC24BO95487 1268 aa15.35■□□□□ 0.05
DNMT1-213ENST00000587604 HARSP12081 509 aaKnown RBP15.35■□□□□ 0.05
DNMT1-213ENST00000587604 PSMC3P17980 439 aa15.35■□□□□ 0.05
DNMT1-213ENST00000587604 GUCY2CP25092 1073 aa15.35■□□□□ 0.05
DNMT1-213ENST00000587604 MARCKSP29966 332 aaPredicted RBP15.35■□□□□ 0.05
DNMT1-213ENST00000587604 CDC25AP30304 524 aa15.35■□□□□ 0.05
DNMT1-213ENST00000587604 MCM4P33991 863 aa15.35■□□□□ 0.05
DNMT1-213ENST00000587604 PRPHP41219 470 aa15.35■□□□□ 0.05
DNMT1-213ENST00000587604 STRN3Q13033 797 aa15.35■□□□□ 0.05
DNMT1-213ENST00000587604 MTAPQ13126 283 aa15.35■□□□□ 0.05
DNMT1-213ENST00000587604 GRM2Q14416 872 aa15.35■□□□□ 0.05
DNMT1-213ENST00000587604 IL17AQ16552 155 aa15.35■□□□□ 0.05
DNMT1-213ENST00000587604 RSPO4Q2I0M5 234 aaPredicted RBP15.35■□□□□ 0.05
DNMT1-213ENST00000587604 TSSK4Q6SA08 328 aa15.35■□□□□ 0.05
DNMT1-213ENST00000587604 DTHD1Q6ZMT9 781 aa15.35■□□□□ 0.05
DNMT1-213ENST00000587604 KCNK18Q7Z418 384 aa15.35■□□□□ 0.05
DNMT1-213ENST00000587604 MAP4K3Q8IVH8 894 aa15.35■□□□□ 0.05
DNMT1-213ENST00000587604 SPIRE2Q8WWL2 714 aa15.35■□□□□ 0.05
DNMT1-213ENST00000587604 ZSWIM3Q96MP5 696 aa15.35■□□□□ 0.05
DNMT1-213ENST00000587604 MMTAG2Q9BU76 263 aaKnown RBP15.35■□□□□ 0.05
DNMT1-213ENST00000587604 PLEKHA5Q9HAU0 1116 aa15.35■□□□□ 0.05
DNMT1-213ENST00000587604 ZNF334Q9HCZ1 680 aaPredicted RBP15.35■□□□□ 0.05
DNMT1-213ENST00000587604 SH2B1Q9NRF2 756 aaPredicted RBP15.35■□□□□ 0.05
DNMT1-213ENST00000587604 CEP72Q9P209 647 aa15.35■□□□□ 0.05
DNMT1-213ENST00000587604 PCDHB8Q9UN66 801 aa15.35■□□□□ 0.05
DNMT1-213ENST00000587604 NRG2O14511 850 aaPredicted RBP15.34■□□□□ 0.05
DNMT1-213ENST00000587604 MOSPD3O75425 235 aa15.34■□□□□ 0.05
DNMT1-213ENST00000587604 SDHBP21912 280 aa15.34■□□□□ 0.05
DNMT1-213ENST00000587604 SMTNP53814 917 aa15.34■□□□□ 0.05
DNMT1-213ENST00000587604 EPHA5P54756 1037 aa15.34■□□□□ 0.05
DNMT1-213ENST00000587604 TWF1Q12792 350 aa15.34■□□□□ 0.05
DNMT1-213ENST00000587604 NOLC1Q14978 699 aaKnown RBP eCLIP15.34■□□□□ 0.05
DNMT1-213ENST00000587604 VITQ6UXI7 678 aa15.34■□□□□ 0.05
DNMT1-213ENST00000587604 ZPBP2Q6X784 338 aa15.34■□□□□ 0.05
DNMT1-213ENST00000587604 HS6ST3Q8IZP7 471 aa15.34■□□□□ 0.05
DNMT1-213ENST00000587604 KCTD17Q8N5Z5 321 aa15.34■□□□□ 0.05
DNMT1-213ENST00000587604 TMEM161BQ8NDZ6 487 aa15.34■□□□□ 0.05
DNMT1-213ENST00000587604 DEPDC1BQ8WUY9 529 aa15.34■□□□□ 0.05
DNMT1-213ENST00000587604 IER2Q9BTL4 223 aa15.34■□□□□ 0.05
DNMT1-213ENST00000587604 GPR88Q9GZN0 384 aa15.34■□□□□ 0.05
DNMT1-213ENST00000587604 CHRDQ9H2X0 955 aa15.34■□□□□ 0.05
DNMT1-213ENST00000587604 TRPV4Q9HBA0 871 aa15.34■□□□□ 0.05
DNMT1-213ENST00000587604 PPP4R2Q9NY27 417 aa15.34■□□□□ 0.05
DNMT1-213ENST00000587604 ANKFY1Q9P2R3 1169 aa15.34■□□□□ 0.05
DNMT1-213ENST00000587604 NDRG2Q9UN36 371 aaKnown RBP15.34■□□□□ 0.05
DNMT1-213ENST00000587604 SMG5Q9UPR3 1016 aaKnown RBP15.34■□□□□ 0.05
DNMT1-213ENST00000587604 TICRRQ7Z2Z1 1910 aa15.34■□□□□ 0.05
DNMT1-213ENST00000587604 CACNA1BQ00975 2339 aa15.33■□□□□ 0.05
DNMT1-213ENST00000587604 M0QZQ0 153 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms