RNA–Protein interactions for RNA: ENST00000587470.1

VMP1-205, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-205ENST00000587470 RNF181Q9P0P0 153 aa5.68□□□□□ -1.5
VMP1-205ENST00000587470 ZNHIT2Q9UHR6 403 aa5.68□□□□□ -1.5
VMP1-205ENST00000587470 SIK3Q9Y2K2 1263 aa5.68□□□□□ -1.5
VMP1-205ENST00000587470 GPR45Q9Y5Y3 372 aa5.68□□□□□ -1.5
VMP1-205ENST00000587470 EPN1Q9Y6I3 576 aaPredicted RBP5.68□□□□□ -1.5
VMP1-205ENST00000587470 TCOF1Q13428 1488 aaKnown RBP5.68□□□□□ -1.5
VMP1-205ENST00000587470 WASHC2AQ641Q2 1341 aa5.68□□□□□ -1.5
VMP1-205ENST00000587470 SRCAPQ6ZRS2 3230 aa5.68□□□□□ -1.5
VMP1-205ENST00000587470 SETD1AO15047 1707 aaKnown RBP5.68□□□□□ -1.5
VMP1-205ENST00000587470 PLCH2O75038 1416 aa5.67□□□□□ -1.5
VMP1-205ENST00000587470 SCAPERQ9BY12 1400 aa5.67□□□□□ -1.5
VMP1-205ENST00000587470 CNTLNQ9NXG0 1405 aa5.67□□□□□ -1.5
VMP1-205ENST00000587470 FAM171A2A8MVW0 826 aa5.67□□□□□ -1.5
VMP1-205ENST00000587470 TEX33O43247 280 aa5.67□□□□□ -1.5
VMP1-205ENST00000587470 CDKL5O76039 1030 aa5.67□□□□□ -1.5
VMP1-205ENST00000587470 FOSP01100 380 aaPredicted RBP5.67□□□□□ -1.5
VMP1-205ENST00000587470 EGR2P11161 476 aaPredicted RBP5.67□□□□□ -1.5
VMP1-205ENST00000587470 OSMP13725 252 aa5.67□□□□□ -1.5
VMP1-205ENST00000587470 MGAT2Q10469 447 aa5.67□□□□□ -1.5
VMP1-205ENST00000587470 TP53BP2Q13625 1128 aa5.67□□□□□ -1.5
VMP1-205ENST00000587470 SEPT2Q15019 361 aa5.67□□□□□ -1.5
VMP1-205ENST00000587470 EGFLAMQ63HQ2 1017 aa5.67□□□□□ -1.5
VMP1-205ENST00000587470 TMEM132CQ8N3T6 1108 aa5.67□□□□□ -1.5
VMP1-205ENST00000587470 COG1Q8WTW3 980 aa5.67□□□□□ -1.5
VMP1-205ENST00000587470 LDAHQ9H6V9 325 aa5.67□□□□□ -1.5
VMP1-205ENST00000587470 AJAP1Q9UKB5 411 aaPredicted RBP5.67□□□□□ -1.5
VMP1-205ENST00000587470 MAP3K1Q13233 1512 aa5.67□□□□□ -1.5
VMP1-205ENST00000587470 MTUS2Q5JR59 1369 aa5.67□□□□□ -1.5
VMP1-205ENST00000587470 A0A1B0GTW7 788 aa5.66□□□□□ -1.5
VMP1-205ENST00000587470 ZAR1LA6NP61 321 aa5.66□□□□□ -1.5
VMP1-205ENST00000587470 ELANEP08246 267 aa5.66□□□□□ -1.5
VMP1-205ENST00000587470 POU3F3P20264 500 aaPredicted RBP5.66□□□□□ -1.5
VMP1-205ENST00000587470 FPR1P21462 350 aa5.66□□□□□ -1.5
VMP1-205ENST00000587470 ALDH1A3P47895 512 aa5.66□□□□□ -1.5
VMP1-205ENST00000587470 SLC6A9P48067 706 aa5.66□□□□□ -1.5
VMP1-205ENST00000587470 SEC24CP53992 1094 aa5.66□□□□□ -1.5
VMP1-205ENST00000587470 EFCAB2Q5VUJ9 269 aa5.66□□□□□ -1.5
VMP1-205ENST00000587470 DPY19L2P1Q6NXN4 242 aa5.66□□□□□ -1.5
VMP1-205ENST00000587470 SEM1Q6ZVN7 128 aa5.66□□□□□ -1.5
VMP1-205ENST00000587470 RNPEPQ9H4A4 650 aa5.66□□□□□ -1.5
VMP1-205ENST00000587470 NOX1Q9Y5S8 564 aa5.66□□□□□ -1.5
VMP1-205ENST00000587470 KIF14Q15058 1648 aa5.66□□□□□ -1.5
VMP1-205ENST00000587470 SUPT6HQ7KZ85 1726 aaKnown RBP5.65□□□□□ -1.5
VMP1-205ENST00000587470 GPATCH8Q9UKJ3 1502 aaKnown RBP5.65□□□□□ -1.5
VMP1-205ENST00000587470 AGXTP21549 392 aa5.65□□□□□ -1.5
VMP1-205ENST00000587470 GCSHP23434 173 aa5.65□□□□□ -1.5
VMP1-205ENST00000587470 KLF1Q13351 362 aaPredicted RBP5.65□□□□□ -1.5
VMP1-205ENST00000587470 B3GNTL1Q67FW5 361 aaPredicted RBP5.65□□□□□ -1.5
VMP1-205ENST00000587470 ZNF772Q68DY9 489 aaPredicted RBP5.65□□□□□ -1.5
VMP1-205ENST00000587470 ZNF529Q6P280 563 aa5.65□□□□□ -1.5
VMP1-205ENST00000587470 AMOTL1Q8IY63 956 aa5.65□□□□□ -1.5
VMP1-205ENST00000587470 FAM43AQ8N2R8 423 aa5.65□□□□□ -1.5
VMP1-205ENST00000587470 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.65□□□□□ -1.5
VMP1-205ENST00000587470 CCHCR1Q8TD31 782 aa5.65□□□□□ -1.5
VMP1-205ENST00000587470 ASB10Q8WXI3 467 aa5.65□□□□□ -1.5
VMP1-205ENST00000587470 BOD1Q96IK1 185 aa5.65□□□□□ -1.5
VMP1-205ENST00000587470 FAM126AQ9BYI3 521 aaPredicted RBP5.65□□□□□ -1.5
VMP1-205ENST00000587470 ALOXE3Q9BYJ1 711 aa5.65□□□□□ -1.5
VMP1-205ENST00000587470 MANSC1Q9H8J5 431 aa5.65□□□□□ -1.5
VMP1-205ENST00000587470 SYNPO2LQ9H987 977 aa5.65□□□□□ -1.5
VMP1-205ENST00000587470 ZNF277Q9NRM2 450 aaPredicted RBP5.65□□□□□ -1.5
VMP1-205ENST00000587470 SLC23A1Q9UHI7 598 aa5.65□□□□□ -1.5
VMP1-205ENST00000587470 MCM8Q9UJA3 840 aa5.65□□□□□ -1.5
VMP1-205ENST00000587470 DNM3Q9UQ16 869 aa5.65□□□□□ -1.5
VMP1-205ENST00000587470 ACTL7AQ9Y615 435 aa5.65□□□□□ -1.5
VMP1-205ENST00000587470 ALKQ9UM73 1620 aa5.65□□□□□ -1.51
VMP1-205ENST00000587470 LRRC9Q6ZRR7 1453 aa5.64□□□□□ -1.51
VMP1-205ENST00000587470 AGLP35573 1532 aa5.64□□□□□ -1.51
VMP1-205ENST00000587470 TIAM1Q13009 1591 aa5.64□□□□□ -1.51
VMP1-205ENST00000587470 TRIM75PA6NK02 468 aa5.64□□□□□ -1.51
VMP1-205ENST00000587470 KIAA0355O15063 1070 aa5.64□□□□□ -1.51
VMP1-205ENST00000587470 GPR32O75388 356 aa5.64□□□□□ -1.51
VMP1-205ENST00000587470 ITGAMP11215 1152 aa5.64□□□□□ -1.51
VMP1-205ENST00000587470 ALAS1P13196 640 aa5.64□□□□□ -1.51
VMP1-205ENST00000587470 PCSK1P29120 753 aa5.64□□□□□ -1.51
VMP1-205ENST00000587470 OCA2Q04671 838 aa5.64□□□□□ -1.51
VMP1-205ENST00000587470 FOXI1Q12951 378 aa5.64□□□□□ -1.51
VMP1-205ENST00000587470 STRIP1Q5VSL9 837 aa5.64□□□□□ -1.51
VMP1-205ENST00000587470 SSH1Q8WYL5 1049 aa5.64□□□□□ -1.51
VMP1-205ENST00000587470 FUBP1Q96AE4 644 aaKnown RBP5.64□□□□□ -1.51
VMP1-205ENST00000587470 SLC2A13Q96QE2 648 aa5.64□□□□□ -1.51
VMP1-205ENST00000587470 MYOCQ99972 504 aa5.64□□□□□ -1.51
VMP1-205ENST00000587470 C7orf25Q9BPX7 421 aa5.64□□□□□ -1.51
VMP1-205ENST00000587470 PUS7LQ9H0K6 701 aaKnown RBP5.64□□□□□ -1.51
VMP1-205ENST00000587470 TMEM74BQ9NUR3 256 aa5.64□□□□□ -1.51
VMP1-205ENST00000587470 SLC5A4Q9NY91 659 aa5.64□□□□□ -1.51
VMP1-205ENST00000587470 POLR2AP24928 1970 aaKnown RBP5.64□□□□□ -1.51
VMP1-205ENST00000587470 ESRRBO95718 433 aa5.63□□□□□ -1.51
VMP1-205ENST00000587470 AMY1AP04745 511 aa5.63□□□□□ -1.51
VMP1-205ENST00000587470 CKBP12277 381 aa5.63□□□□□ -1.51
VMP1-205ENST00000587470 DDCP20711 480 aa5.63□□□□□ -1.51
VMP1-205ENST00000587470 FGFR4P22455 802 aa5.63□□□□□ -1.51
VMP1-205ENST00000587470 SLC6A2P23975 617 aa5.63□□□□□ -1.51
VMP1-205ENST00000587470 MTM1Q13496 603 aa5.63□□□□□ -1.51
VMP1-205ENST00000587470 ERCC6LQ2NKX8 1250 aa5.63□□□□□ -1.51
VMP1-205ENST00000587470 UBE3BQ7Z3V4 1068 aa5.63□□□□□ -1.51
VMP1-205ENST00000587470 PRIMA1Q86XR5 153 aa5.63□□□□□ -1.51
VMP1-205ENST00000587470 OR2I1PQ8NGU4 316 aa5.63□□□□□ -1.51
VMP1-205ENST00000587470 SLC9A6Q92581 669 aa5.63□□□□□ -1.51
VMP1-205ENST00000587470 ZSWIM1Q9BR11 485 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms