RNA–Protein interactions for RNA: ENST00000587173.5

VAT1-205, Transcript of vesicle amine transport 1, humanhuman

TSL 2 BASIC

Gene VAT1, Length 1,174 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-205ENST00000587173 SLC12A3P55017 1021 aa17.13■□□□□ 0.33
VAT1-205ENST00000587173 TPGS2Q68CL5 300 aa17.13■□□□□ 0.33
VAT1-205ENST00000587173 TANGO2Q6ICL3 276 aa17.13■□□□□ 0.33
VAT1-205ENST00000587173 TPRG1Q6ZUI0 275 aa17.13■□□□□ 0.33
VAT1-205ENST00000587173 PDZD4Q76G19 769 aaPredicted RBP17.13■□□□□ 0.33
VAT1-205ENST00000587173 APPL2Q8NEU8 664 aa17.13■□□□□ 0.33
VAT1-205ENST00000587173 DDX12PQ92771 950 aa17.13■□□□□ 0.33
VAT1-205ENST00000587173 ELSPBP1Q96BH3 223 aa17.13■□□□□ 0.33
VAT1-205ENST00000587173 TCEAL4Q96EI5 215 aa17.13■□□□□ 0.33
VAT1-205ENST00000587173 TBC1D32Q96NH3 1257 aa17.13■□□□□ 0.33
VAT1-205ENST00000587173 HINFPQ9BQA5 517 aa17.13■□□□□ 0.33
VAT1-205ENST00000587173 LARSQ9P2J5 1176 aaKnown RBP17.13■□□□□ 0.33
VAT1-205ENST00000587173 SMC3Q9UQE7 1217 aa17.13■□□□□ 0.33
VAT1-205ENST00000587173 RIF1Q5UIP0 2472 aaKnown RBP17.12■□□□□ 0.33
VAT1-205ENST00000587173 MYH15Q9Y2K3 1946 aa17.12■□□□□ 0.33
VAT1-205ENST00000587173 ZNF197O14709 1029 aa17.12■□□□□ 0.33
VAT1-205ENST00000587173 CLDN3O15551 220 aa17.12■□□□□ 0.33
VAT1-205ENST00000587173 PLA2G4BP0C869 781 aa17.12■□□□□ 0.33
VAT1-205ENST00000587173 CXCL8P10145 99 aa17.12■□□□□ 0.33
VAT1-205ENST00000587173 FCARP24071 287 aa17.12■□□□□ 0.33
VAT1-205ENST00000587173 TARSP26639 723 aaKnown RBP17.12■□□□□ 0.33
VAT1-205ENST00000587173 UBA7P41226 1012 aa17.12■□□□□ 0.33
VAT1-205ENST00000587173 MAGEA9P43362 315 aa17.12■□□□□ 0.33
VAT1-205ENST00000587173 CACNB1Q02641 598 aaPredicted RBP17.12■□□□□ 0.33
VAT1-205ENST00000587173 MCL1Q07820 350 aa17.12■□□□□ 0.33
VAT1-205ENST00000587173 ADCY1Q08828 1119 aa17.12■□□□□ 0.33
VAT1-205ENST00000587173 ZBTB41Q5SVQ8 909 aa17.12■□□□□ 0.33
VAT1-205ENST00000587173 ZPBP2Q6X784 338 aa17.12■□□□□ 0.33
VAT1-205ENST00000587173 ELMOD1Q8N336 334 aa17.12■□□□□ 0.33
VAT1-205ENST00000587173 BICD1Q96G01 975 aa17.12■□□□□ 0.33
VAT1-205ENST00000587173 CALML4Q96GE6 196 aa17.12■□□□□ 0.33
VAT1-205ENST00000587173 AK8Q96MA6 479 aa17.12■□□□□ 0.33
VAT1-205ENST00000587173 HEBP1Q9NRV9 189 aa17.12■□□□□ 0.33
VAT1-205ENST00000587173 PCDHB8Q9UN66 801 aa17.12■□□□□ 0.33
VAT1-205ENST00000587173 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.12■□□□□ 0.33
VAT1-205ENST00000587173 NPHP3-ACAD11A0A0J9YXS1 232 aa17.11■□□□□ 0.33
VAT1-205ENST00000587173 SLC26A4O43511 780 aa17.11■□□□□ 0.33
VAT1-205ENST00000587173 CPB1P15086 417 aa17.11■□□□□ 0.33
VAT1-205ENST00000587173 MARCKSP29966 332 aaPredicted RBP17.11■□□□□ 0.33
VAT1-205ENST00000587173 CCR2P41597 374 aa17.11■□□□□ 0.33
VAT1-205ENST00000587173 SPAG1Q07617 926 aa17.11■□□□□ 0.33
VAT1-205ENST00000587173 TWF1Q12792 350 aa17.11■□□□□ 0.33
VAT1-205ENST00000587173 GRM2Q14416 872 aa17.11■□□□□ 0.33
VAT1-205ENST00000587173 TMEM119Q4V9L6 283 aa17.11■□□□□ 0.33
VAT1-205ENST00000587173 CYP4A22Q5TCH4 519 aa17.11■□□□□ 0.33
VAT1-205ENST00000587173 LARP1BQ659C4 914 aaKnown RBP17.11■□□□□ 0.33
VAT1-205ENST00000587173 IQCEQ6IPM2 695 aa17.11■□□□□ 0.33
VAT1-205ENST00000587173 ERMP1Q7Z2K6 904 aa17.11■□□□□ 0.33
VAT1-205ENST00000587173 TMEM130Q8N3G9 435 aa17.11■□□□□ 0.33
VAT1-205ENST00000587173 KIF12Q96FN5 646 aa17.11■□□□□ 0.33
VAT1-205ENST00000587173 ZNF512Q96ME7 567 aaPredicted RBP17.11■□□□□ 0.33
VAT1-205ENST00000587173 HAPLN2Q9GZV7 340 aa17.11■□□□□ 0.33
VAT1-205ENST00000587173 PLEKHA5Q9HAU0 1116 aa17.11■□□□□ 0.33
VAT1-205ENST00000587173 ZFP14Q9HCL3 533 aa17.11■□□□□ 0.33
VAT1-205ENST00000587173 AFF4Q9UHB7 1163 aaKnown RBP17.11■□□□□ 0.33
VAT1-205ENST00000587173 FBXO4Q9UKT5 387 aa17.11■□□□□ 0.33
VAT1-205ENST00000587173 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.11■□□□□ 0.33
VAT1-205ENST00000587173 NOTCH4Q99466 2003 aa17.11■□□□□ 0.33
VAT1-205ENST00000587173 NRG2O14511 850 aaPredicted RBP17.1■□□□□ 0.33
VAT1-205ENST00000587173 KINO60870 393 aaKnown RBP17.1■□□□□ 0.33
VAT1-205ENST00000587173 MICAL2O94851 1124 aa17.1■□□□□ 0.33
VAT1-205ENST00000587173 CLTAP09496 248 aa17.1■□□□□ 0.33
VAT1-205ENST00000587173 SCP2P22307 547 aa17.1■□□□□ 0.33
VAT1-205ENST00000587173 LRPAP1P30533 357 aa17.1■□□□□ 0.33
VAT1-205ENST00000587173 NCKAP1LP55160 1127 aa17.1■□□□□ 0.33
VAT1-205ENST00000587173 CSTF1Q05048 431 aaKnown RBP17.1■□□□□ 0.33
VAT1-205ENST00000587173 ZNF528Q3MIS6 628 aa17.1■□□□□ 0.33
VAT1-205ENST00000587173 FAM78AQ5JUQ0 283 aa17.1■□□□□ 0.33
VAT1-205ENST00000587173 ZNF852Q6ZMS4 543 aa17.1■□□□□ 0.33
VAT1-205ENST00000587173 RNF19BQ6ZMZ0 732 aa17.1■□□□□ 0.33
VAT1-205ENST00000587173 KIAA2013Q8IYS2 634 aa17.1■□□□□ 0.33
VAT1-205ENST00000587173 HS6ST3Q8IZP7 471 aa17.1■□□□□ 0.33
VAT1-205ENST00000587173 DNASE1L2Q92874 299 aa17.1■□□□□ 0.33
VAT1-205ENST00000587173 ASB16Q96NS5 453 aa17.1■□□□□ 0.33
VAT1-205ENST00000587173 NELL2Q99435 816 aa17.1■□□□□ 0.33
VAT1-205ENST00000587173 CEP72Q9P209 647 aa17.1■□□□□ 0.33
VAT1-205ENST00000587173 MAFFQ9ULX9 164 aa17.1■□□□□ 0.33
VAT1-205ENST00000587173 MRPS17Q9Y2R5 130 aaKnown RBP17.1■□□□□ 0.33
VAT1-205ENST00000587173 TTC26A0AVF1 554 aa17.09■□□□□ 0.33
VAT1-205ENST00000587173 NCAM2O15394 837 aa17.09■□□□□ 0.33
VAT1-205ENST00000587173 BMP15O95972 392 aa17.09■□□□□ 0.33
VAT1-205ENST00000587173 MYL4P12829 197 aa17.09■□□□□ 0.33
VAT1-205ENST00000587173 TNFSF9P41273 254 aa17.09■□□□□ 0.33
VAT1-205ENST00000587173 YWHAHQ04917 246 aaPredicted RBP17.09■□□□□ 0.33
VAT1-205ENST00000587173 PPP2R3AQ06190 1150 aa17.09■□□□□ 0.33
VAT1-205ENST00000587173 KYAT1Q16773 422 aa17.09■□□□□ 0.33
VAT1-205ENST00000587173 RASSF8Q8NHQ8 419 aa17.09■□□□□ 0.33
VAT1-205ENST00000587173 RUBCNQ92622 972 aa17.09■□□□□ 0.33
VAT1-205ENST00000587173 CLDN23Q96B33 292 aa17.09■□□□□ 0.33
VAT1-205ENST00000587173 TRMT61BQ9BVS5 477 aaKnown RBP17.09■□□□□ 0.33
VAT1-205ENST00000587173 BRD9Q9H8M2 597 aa17.09■□□□□ 0.33
VAT1-205ENST00000587173 ASAH2Q9NR71 780 aa17.09■□□□□ 0.33
VAT1-205ENST00000587173 ODF2LQ9ULJ1 636 aa17.09■□□□□ 0.33
VAT1-205ENST00000587173 UBQLN1Q9UMX0 589 aaKnown RBP17.09■□□□□ 0.33
VAT1-205ENST00000587173 TIMM13Q9Y5L4 95 aaPredicted RBP17.09■□□□□ 0.33
VAT1-205ENST00000587173 TRIP11Q15643 1979 aa17.08■□□□□ 0.33
VAT1-205ENST00000587173 M0QZQ0 153 aa17.08■□□□□ 0.32
VAT1-205ENST00000587173 MOSPD3O75425 235 aa17.08■□□□□ 0.32
VAT1-205ENST00000587173 KRT18P05783 430 aaKnown RBP17.08■□□□□ 0.32
VAT1-205ENST00000587173 OR4Q2P0C623 313 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms