RNA–Protein interactions for RNA: ENST00000586477.1

ATG4D-205, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-205ENST00000586477 ANKRD20A12PQ8NF67 263 aa17.46■□□□□ 0.39
ATG4D-205ENST00000586477 FEZF2Q8TBJ5 459 aa17.46■□□□□ 0.39
ATG4D-205ENST00000586477 FBXL18Q96ME1 805 aa17.46■□□□□ 0.39
ATG4D-205ENST00000586477 ACAP3Q96P50 834 aa17.46■□□□□ 0.39
ATG4D-205ENST00000586477 LRFN3Q9BTN0 628 aa17.46■□□□□ 0.39
ATG4D-205ENST00000586477 THAP9Q9H5L6 903 aa17.46■□□□□ 0.39
ATG4D-205ENST00000586477 PLEKHA5Q9HAU0 1116 aa17.46■□□□□ 0.39
ATG4D-205ENST00000586477 MAGEC2Q9UBF1 373 aaPredicted RBP17.46■□□□□ 0.39
ATG4D-205ENST00000586477 IRAK3Q9Y616 596 aa17.46■□□□□ 0.39
ATG4D-205ENST00000586477 TRIM49BA6NDI0 452 aa17.45■□□□□ 0.38
ATG4D-205ENST00000586477 PI4K2BG5E9Z4 385 aa17.45■□□□□ 0.38
ATG4D-205ENST00000586477 GOLGA6L19H0YKK7 550 aa17.45■□□□□ 0.38
ATG4D-205ENST00000586477 PTGESO14684 152 aa17.45■□□□□ 0.38
ATG4D-205ENST00000586477 LILRB3O75022 631 aa17.45■□□□□ 0.38
ATG4D-205ENST00000586477 IL18RAPO95256 599 aa17.45■□□□□ 0.38
ATG4D-205ENST00000586477 KRT13P13646 458 aa17.45■□□□□ 0.38
ATG4D-205ENST00000586477 STX17P56962 302 aa17.45■□□□□ 0.38
ATG4D-205ENST00000586477 SPAG1Q07617 926 aa17.45■□□□□ 0.38
ATG4D-205ENST00000586477 PTPN14Q15678 1187 aa17.45■□□□□ 0.38
ATG4D-205ENST00000586477 SNRNP35Q16560 246 aaKnown RBP17.45■□□□□ 0.38
ATG4D-205ENST00000586477 CEP135Q66GS9 1140 aa17.45■□□□□ 0.38
ATG4D-205ENST00000586477 INTS8Q75QN2 995 aaKnown RBP17.45■□□□□ 0.38
ATG4D-205ENST00000586477 FILIP1Q7Z7B0 1213 aa17.45■□□□□ 0.38
ATG4D-205ENST00000586477 ADHFE1Q8IWW8 467 aa17.45■□□□□ 0.38
ATG4D-205ENST00000586477 SUSD6Q92537 303 aa17.45■□□□□ 0.38
ATG4D-205ENST00000586477 ZBTB45Q96K62 511 aaPredicted RBP17.45■□□□□ 0.38
ATG4D-205ENST00000586477 FAM213AQ9BRX8 229 aa17.45■□□□□ 0.38
ATG4D-205ENST00000586477 PCIF1Q9H4Z3 704 aa17.45■□□□□ 0.38
ATG4D-205ENST00000586477 RPF1Q9H9Y2 349 aaKnown RBP17.45■□□□□ 0.38
ATG4D-205ENST00000586477 SNTG2Q9NY99 539 aa17.45■□□□□ 0.38
ATG4D-205ENST00000586477 CACNG4Q9UBN1 327 aa17.45■□□□□ 0.38
ATG4D-205ENST00000586477 PRKAG3Q9UGI9 489 aa17.45■□□□□ 0.38
ATG4D-205ENST00000586477 CDH22Q9UJ99 828 aa17.45■□□□□ 0.38
ATG4D-205ENST00000586477 FAN1Q9Y2M0 1017 aa17.45■□□□□ 0.38
ATG4D-205ENST00000586477 PRG3Q9Y2Y8 225 aaPredicted RBP17.45■□□□□ 0.38
ATG4D-205ENST00000586477 USP15Q9Y4E8 981 aaPredicted RBP17.45■□□□□ 0.38
ATG4D-205ENST00000586477 PLXNA3P51805 1871 aa17.45■□□□□ 0.38
ATG4D-205ENST00000586477 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.44■□□□□ 0.38
ATG4D-205ENST00000586477 TISP43B9A030 160 aa17.44■□□□□ 0.38
ATG4D-205ENST00000586477 GPR37L1O60883 481 aa17.44■□□□□ 0.38
ATG4D-205ENST00000586477 ALDH2P05091 517 aa17.44■□□□□ 0.38
ATG4D-205ENST00000586477 PMS1P54277 932 aaKnown RBP17.44■□□□□ 0.38
ATG4D-205ENST00000586477 PPP2R3AQ06190 1150 aa17.44■□□□□ 0.38
ATG4D-205ENST00000586477 NAB2Q15742 525 aa17.44■□□□□ 0.38
ATG4D-205ENST00000586477 ANKRD54Q6NXT1 300 aa17.44■□□□□ 0.38
ATG4D-205ENST00000586477 SLC22A17Q8WUG5 538 aa17.44■□□□□ 0.38
ATG4D-205ENST00000586477 PAAF1Q9BRP4 392 aa17.44■□□□□ 0.38
ATG4D-205ENST00000586477 SRRTQ9BXP5 876 aaKnown RBP17.44■□□□□ 0.38
ATG4D-205ENST00000586477 C11orf16Q9NQ32 467 aa17.44■□□□□ 0.38
ATG4D-205ENST00000586477 RBAKQ9NYW8 714 aaPredicted RBP17.44■□□□□ 0.38
ATG4D-205ENST00000586477 PARP2Q9UGN5 583 aa17.44■□□□□ 0.38
ATG4D-205ENST00000586477 CPSF3Q9UKF6 684 aaKnown RBP17.44■□□□□ 0.38
ATG4D-205ENST00000586477 NFE2L3Q9Y4A8 694 aa17.44■□□□□ 0.38
ATG4D-205ENST00000586477 HCFC2Q9Y5Z7 792 aa17.44■□□□□ 0.38
ATG4D-205ENST00000586477 CARNS1A5YM72 827 aa17.43■□□□□ 0.38
ATG4D-205ENST00000586477 XPOTO43592 962 aaKnown RBP17.43■□□□□ 0.38
ATG4D-205ENST00000586477 STX10O60499 249 aa17.43■□□□□ 0.38
ATG4D-205ENST00000586477 RECQL4O94761 1208 aa17.43■□□□□ 0.38
ATG4D-205ENST00000586477 TPM2P07951 284 aa17.43■□□□□ 0.38
ATG4D-205ENST00000586477 OR1G1P47890 313 aa17.43■□□□□ 0.38
ATG4D-205ENST00000586477 CCDC40Q4G0X9 1142 aa17.43■□□□□ 0.38
ATG4D-205ENST00000586477 FRMD5Q7Z6J6 570 aa17.43■□□□□ 0.38
ATG4D-205ENST00000586477 NT5DC4Q86YG4 428 aa17.43■□□□□ 0.38
ATG4D-205ENST00000586477 FAM186BQ8IYM0 893 aa17.43■□□□□ 0.38
ATG4D-205ENST00000586477 AOPEPQ8N6M6 819 aa17.43■□□□□ 0.38
ATG4D-205ENST00000586477 RABGGTAQ92696 567 aa17.43■□□□□ 0.38
ATG4D-205ENST00000586477 SAAL1Q96ER3 474 aa17.43■□□□□ 0.38
ATG4D-205ENST00000586477 FAM193BQ96PV7 902 aaPredicted RBP17.43■□□□□ 0.38
ATG4D-205ENST00000586477 FNBP1Q96RU3 617 aa17.43■□□□□ 0.38
ATG4D-205ENST00000586477 DUSP9Q99956 384 aaKnown RBP17.43■□□□□ 0.38
ATG4D-205ENST00000586477 IKZF4Q9H2S9 585 aa17.43■□□□□ 0.38
ATG4D-205ENST00000586477 ASB7Q9H672 318 aa17.43■□□□□ 0.38
ATG4D-205ENST00000586477 ARMCX3Q9UH62 379 aaPredicted RBP17.43■□□□□ 0.38
ATG4D-205ENST00000586477 VWA8A3KMH1 1905 aa17.43■□□□□ 0.38
ATG4D-205ENST00000586477 FSD2A1L4K1 749 aa17.42■□□□□ 0.38
ATG4D-205ENST00000586477 FAM86C2PA6NEL3 165 aa17.42■□□□□ 0.38
ATG4D-205ENST00000586477 MEFVO15553 781 aaPredicted RBP17.42■□□□□ 0.38
ATG4D-205ENST00000586477 FAM189A1O60320 539 aa17.42■□□□□ 0.38
ATG4D-205ENST00000586477 ALADP13716 330 aa17.42■□□□□ 0.38
ATG4D-205ENST00000586477 EPCAMP16422 314 aa17.42■□□□□ 0.38
ATG4D-205ENST00000586477 IGFBP6P24592 240 aaPredicted RBP17.42■□□□□ 0.38
ATG4D-205ENST00000586477 EEF1GP26641 437 aaKnown RBP17.42■□□□□ 0.38
ATG4D-205ENST00000586477 ACOT2P49753 483 aa17.42■□□□□ 0.38
ATG4D-205ENST00000586477 AP3M2P53677 418 aa17.42■□□□□ 0.38
ATG4D-205ENST00000586477 GRIK3Q13003 919 aa17.42■□□□□ 0.38
ATG4D-205ENST00000586477 BRSK2Q8IWQ3 736 aa17.42■□□□□ 0.38
ATG4D-205ENST00000586477 CEP120Q8N960 986 aa17.42■□□□□ 0.38
ATG4D-205ENST00000586477 RPS6KC1Q96S38 1066 aa17.42■□□□□ 0.38
ATG4D-205ENST00000586477 HERC2P3Q9BVR0 1158 aa17.42■□□□□ 0.38
ATG4D-205ENST00000586477 APOL5Q9BWW9 433 aa17.42■□□□□ 0.38
ATG4D-205ENST00000586477 HAPLN2Q9GZV7 340 aa17.42■□□□□ 0.38
ATG4D-205ENST00000586477 DERAQ9Y315 318 aa17.42■□□□□ 0.38
ATG4D-205ENST00000586477 CITO14578 2027 aa17.42■□□□□ 0.38
ATG4D-205ENST00000586477 PDCD11Q14690 1871 aaKnown RBP17.41■□□□□ 0.38
ATG4D-205ENST00000586477 C2orf16Q68DN1 1984 aa17.41■□□□□ 0.38
ATG4D-205ENST00000586477 SOD2P04179 222 aa17.41■□□□□ 0.38
ATG4D-205ENST00000586477 MARSP56192 900 aaKnown RBP17.41■□□□□ 0.38
ATG4D-205ENST00000586477 OSTNP61366 133 aa17.41■□□□□ 0.38
ATG4D-205ENST00000586477 KIAA0319Q5VV43 1072 aa17.41■□□□□ 0.38
ATG4D-205ENST00000586477 TMC2Q8TDI7 906 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms