RNA–Protein interactions for RNA: ENST00000586080.1

R3HDM4-202, Transcript of R3H domain containing 4, humanhuman

TSL 4

Gene R3HDM4, Length 537 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-202ENST00000586080 EXTL3O43909 919 aa23.5■■□□□ 1.35
R3HDM4-202ENST00000586080 IL18RAPO95256 599 aa23.5■■□□□ 1.35
R3HDM4-202ENST00000586080 MTHFRP42898 656 aa23.5■■□□□ 1.35
R3HDM4-202ENST00000586080 VARS2Q5ST30 1063 aaKnown RBP23.5■■□□□ 1.35
R3HDM4-202ENST00000586080 BRSK2Q8IWQ3 736 aa23.5■■□□□ 1.35
R3HDM4-202ENST00000586080 ZNF507Q8TCN5 953 aa23.5■■□□□ 1.35
R3HDM4-202ENST00000586080 SCFD1Q8WVM8 642 aa23.5■■□□□ 1.35
R3HDM4-202ENST00000586080 SUSD3Q96L08 255 aa23.5■■□□□ 1.35
R3HDM4-202ENST00000586080 NECTIN4Q96NY8 510 aa23.5■■□□□ 1.35
R3HDM4-202ENST00000586080 MTRRQ9UBK8 725 aa23.5■■□□□ 1.35
R3HDM4-202ENST00000586080 C2CD2Q9Y426 696 aa23.5■■□□□ 1.35
R3HDM4-202ENST00000586080 CDY1Q9Y6F8 540 aa23.5■■□□□ 1.35
R3HDM4-202ENST00000586080 MUC3AQ02505 3323 aa23.49■■□□□ 1.35
R3HDM4-202ENST00000586080 PPEF2O14830 753 aa23.49■■□□□ 1.35
R3HDM4-202ENST00000586080 SYN3O14994 580 aa23.49■■□□□ 1.35
R3HDM4-202ENST00000586080 KLRC4O43908 158 aa23.49■■□□□ 1.35
R3HDM4-202ENST00000586080 PRR29P0C7W0 189 aa23.49■■□□□ 1.35
R3HDM4-202ENST00000586080 OR1D2P34982 312 aa23.49■■□□□ 1.35
R3HDM4-202ENST00000586080 HOXD13P35453 343 aa23.49■■□□□ 1.35
R3HDM4-202ENST00000586080 ANP32AP39687 249 aaKnown RBP23.49■■□□□ 1.35
R3HDM4-202ENST00000586080 POU5F1Q01860 360 aaKnown RBP23.49■■□□□ 1.35
R3HDM4-202ENST00000586080 KMT5BQ4FZB7 885 aa23.49■■□□□ 1.35
R3HDM4-202ENST00000586080 ATAT1Q5SQI0 421 aa23.49■■□□□ 1.35
R3HDM4-202ENST00000586080 DSTYKQ6XUX3 929 aa23.49■■□□□ 1.35
R3HDM4-202ENST00000586080 KRBA2Q6ZNG9 492 aa23.49■■□□□ 1.35
R3HDM4-202ENST00000586080 EFCAB13Q8IY85 973 aa23.49■■□□□ 1.35
R3HDM4-202ENST00000586080 GPD1LQ8N335 351 aa23.49■■□□□ 1.35
R3HDM4-202ENST00000586080 KREMEN2Q8NCW0 462 aa23.49■■□□□ 1.35
R3HDM4-202ENST00000586080 FEZF2Q8TBJ5 459 aa23.49■■□□□ 1.35
R3HDM4-202ENST00000586080 PLEKHA4Q9H4M7 779 aa23.49■■□□□ 1.35
R3HDM4-202ENST00000586080 POMKQ9H5K3 350 aa23.49■■□□□ 1.35
R3HDM4-202ENST00000586080 TRIP11Q15643 1979 aa23.49■■□□□ 1.35
R3HDM4-202ENST00000586080 C19orf67A6NJJ6 358 aa23.48■■□□□ 1.35
R3HDM4-202ENST00000586080 RFPL2O75678 378 aa23.48■■□□□ 1.35
R3HDM4-202ENST00000586080 ZNF202O95125 648 aa23.48■■□□□ 1.35
R3HDM4-202ENST00000586080 MYL1P05976 194 aa23.48■■□□□ 1.35
R3HDM4-202ENST00000586080 ARPP19P56211 112 aa23.48■■□□□ 1.35
R3HDM4-202ENST00000586080 TFAMQ00059 246 aaKnown RBP23.48■■□□□ 1.35
R3HDM4-202ENST00000586080 LIN9Q5TKA1 542 aa23.48■■□□□ 1.35
R3HDM4-202ENST00000586080 HS2ST1Q7LGA3 356 aa23.48■■□□□ 1.35
R3HDM4-202ENST00000586080 APPL2Q8NEU8 664 aa23.48■■□□□ 1.35
R3HDM4-202ENST00000586080 CCDC47Q96A33 483 aaKnown RBP23.48■■□□□ 1.35
R3HDM4-202ENST00000586080 AGPAT3Q9NRZ7 376 aa23.48■■□□□ 1.35
R3HDM4-202ENST00000586080 HSPBP1Q9NZL4 362 aa23.48■■□□□ 1.35
R3HDM4-202ENST00000586080 PCDHB8Q9UN66 801 aa23.48■■□□□ 1.35
R3HDM4-202ENST00000586080 BACE2Q9Y5Z0 518 aa23.48■■□□□ 1.35
R3HDM4-202ENST00000586080 CCDC195A0A1B0GUA6 201 aa23.47■■□□□ 1.35
R3HDM4-202ENST00000586080 H7C4K7 107 aa23.47■■□□□ 1.35
R3HDM4-202ENST00000586080 KIAA0391O15091 583 aaKnown RBP23.47■■□□□ 1.35
R3HDM4-202ENST00000586080 CLIC2O15247 247 aa23.47■■□□□ 1.35
R3HDM4-202ENST00000586080 RPN1P04843 607 aaKnown RBP23.47■■□□□ 1.35
R3HDM4-202ENST00000586080 CYP2J2P51589 502 aa23.47■■□□□ 1.35
R3HDM4-202ENST00000586080 WNT7BP56706 349 aa23.47■■□□□ 1.35
R3HDM4-202ENST00000586080 C9orf57Q5W0N0 161 aa23.47■■□□□ 1.35
R3HDM4-202ENST00000586080 LILRA6Q6PI73 481 aa23.47■■□□□ 1.35
R3HDM4-202ENST00000586080 RSPO2Q6UXX9 243 aaPredicted RBP23.47■■□□□ 1.35
R3HDM4-202ENST00000586080 GPR149Q86SP6 731 aa23.47■■□□□ 1.35
R3HDM4-202ENST00000586080 CCDC34Q96HJ3 373 aa23.47■■□□□ 1.35
R3HDM4-202ENST00000586080 DPP3Q9NY33 737 aa23.47■■□□□ 1.35
R3HDM4-202ENST00000586080 FBXW11Q9UKB1 542 aa23.47■■□□□ 1.35
R3HDM4-202ENST00000586080 CIZ1Q9ULV3 898 aaPredicted RBP23.47■■□□□ 1.35
R3HDM4-202ENST00000586080 TIMM13Q9Y5L4 95 aaPredicted RBP23.47■■□□□ 1.35
R3HDM4-202ENST00000586080 STK4Q13043 487 aa23.46■■□□□ 1.35
R3HDM4-202ENST00000586080 CTXN3Q4LDR2 81 aa23.46■■□□□ 1.35
R3HDM4-202ENST00000586080 ZNF280DQ6N043 979 aa23.46■■□□□ 1.35
R3HDM4-202ENST00000586080 HDAC7Q8WUI4 952 aa23.46■■□□□ 1.35
R3HDM4-202ENST00000586080 KHSRPQ92945 711 aaKnown RBP eCLIP23.46■■□□□ 1.35
R3HDM4-202ENST00000586080 PIDD1Q9HB75 910 aa23.46■■□□□ 1.35
R3HDM4-202ENST00000586080 PDE11AQ9HCR9 933 aa23.46■■□□□ 1.35
R3HDM4-202ENST00000586080 ZNF233A6NK53 670 aa23.45■■□□□ 1.34
R3HDM4-202ENST00000586080 LOC730098B7Z3J9 87 aa23.45■■□□□ 1.34
R3HDM4-202ENST00000586080 TGFB1I1O43294 461 aa23.45■■□□□ 1.34
R3HDM4-202ENST00000586080 C1RP00736 705 aa23.45■■□□□ 1.34
R3HDM4-202ENST00000586080 RAB33AQ14088 237 aa23.45■■□□□ 1.34
R3HDM4-202ENST00000586080 KNOP1Q1ED39 458 aaKnown RBP23.45■■□□□ 1.34
R3HDM4-202ENST00000586080 BMT2Q1RMZ1 405 aa23.45■■□□□ 1.34
R3HDM4-202ENST00000586080 C15orf39Q6ZRI6 1047 aa23.45■■□□□ 1.34
R3HDM4-202ENST00000586080 USP37Q86T82 979 aa23.45■■□□□ 1.34
R3HDM4-202ENST00000586080 NT5DC4Q86YG4 428 aa23.45■■□□□ 1.34
R3HDM4-202ENST00000586080 CBWD2Q8IUF1 395 aa23.45■■□□□ 1.34
R3HDM4-202ENST00000586080 KIAA0895Q8NCT3 520 aa23.45■■□□□ 1.34
R3HDM4-202ENST00000586080 CMASQ8NFW8 434 aaPredicted RBP23.45■■□□□ 1.34
R3HDM4-202ENST00000586080 SMG7Q92540 1137 aaKnown RBP23.45■■□□□ 1.34
R3HDM4-202ENST00000586080 NR2E1Q9Y466 385 aa23.45■■□□□ 1.34
R3HDM4-202ENST00000586080 NCOR1O75376 2440 aa23.44■■□□□ 1.34
R3HDM4-202ENST00000586080 M0QZQ0 153 aa23.44■■□□□ 1.34
R3HDM4-202ENST00000586080 C8AP07357 584 aa23.44■■□□□ 1.34
R3HDM4-202ENST00000586080 AARSP49588 968 aaKnown RBP eCLIP23.44■■□□□ 1.348e-6■■■■■ 52.4
R3HDM4-202ENST00000586080 LILRA4P59901 499 aa23.44■■□□□ 1.34
R3HDM4-202ENST00000586080 ROR1Q01973 937 aa23.44■■□□□ 1.34
R3HDM4-202ENST00000586080 YWHAHQ04917 246 aaPredicted RBP23.44■■□□□ 1.34
R3HDM4-202ENST00000586080 PSMD2Q13200 908 aa23.44■■□□□ 1.34
R3HDM4-202ENST00000586080 LMBRD2Q68DH5 695 aaPredicted RBP23.44■■□□□ 1.34
R3HDM4-202ENST00000586080 CCDC149Q6ZUS6 474 aa23.44■■□□□ 1.34
R3HDM4-202ENST00000586080 RDH13Q8NBN7 331 aa23.44■■□□□ 1.34
R3HDM4-202ENST00000586080 CACTINQ8WUQ7 758 aaKnown RBP23.44■■□□□ 1.34
R3HDM4-202ENST00000586080 FAM84AQ96KN4 292 aa23.44■■□□□ 1.34
R3HDM4-202ENST00000586080 ZDHHC7Q9NXF8 308 aa23.44■■□□□ 1.34
R3HDM4-202ENST00000586080 FBXL5Q9UKA1 691 aa23.44■■□□□ 1.34
R3HDM4-202ENST00000586080 C5orf42Q9H799 3197 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms