RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 PARP2Q9UGN5 583 aa13.65□□□□□ -0.22
VMP1-202ENST00000585847 MSRAQ9UJ68 235 aa13.65□□□□□ -0.22
VMP1-202ENST00000585847 LRFN2Q9ULH4 789 aa13.65□□□□□ -0.22
VMP1-202ENST00000585847 TTC28Q96AY4 2481 aa13.64□□□□□ -0.23
VMP1-202ENST00000585847 ARL5CA6NH57 179 aa13.64□□□□□ -0.23
VMP1-202ENST00000585847 TBKBP1A7MCY6 615 aa13.64□□□□□ -0.23
VMP1-202ENST00000585847 LACTBL1A8MY62 500 aa13.64□□□□□ -0.23
VMP1-202ENST00000585847 IL18RAPO95256 599 aa13.64□□□□□ -0.23
VMP1-202ENST00000585847 TUBB4AP04350 444 aa13.64□□□□□ -0.23
VMP1-202ENST00000585847 GYPCP04921 128 aa13.64□□□□□ -0.23
VMP1-202ENST00000585847 HNRNPH3P31942 346 aaKnown RBP13.64□□□□□ -0.23
VMP1-202ENST00000585847 FMO5P49326 533 aa13.64□□□□□ -0.23
VMP1-202ENST00000585847 MXI1P50539 228 aa13.64□□□□□ -0.23
VMP1-202ENST00000585847 SCNN1GP51170 649 aa13.64□□□□□ -0.23
VMP1-202ENST00000585847 MYL7Q01449 175 aa13.64□□□□□ -0.23
VMP1-202ENST00000585847 CYP24A1Q07973 514 aa13.64□□□□□ -0.23
VMP1-202ENST00000585847 ZBTB6Q15916 424 aa13.64□□□□□ -0.23
VMP1-202ENST00000585847 PAN2Q504Q3 1202 aaKnown RBP13.64□□□□□ -0.23
VMP1-202ENST00000585847 NOMO2Q5JPE7 1267 aa13.64□□□□□ -0.23
VMP1-202ENST00000585847 KRT39Q6A163 491 aa13.64□□□□□ -0.23
VMP1-202ENST00000585847 SCARA3Q6AZY7 606 aa13.64□□□□□ -0.23
VMP1-202ENST00000585847 ENOSF1Q7L5Y1 443 aa13.64□□□□□ -0.23
VMP1-202ENST00000585847 TMTC1Q8IUR5 882 aa13.64□□□□□ -0.23
VMP1-202ENST00000585847 CMTR2Q8IYT2 770 aaKnown RBP13.64□□□□□ -0.23
VMP1-202ENST00000585847 EEF2KMTQ96G04 330 aa13.64□□□□□ -0.23
VMP1-202ENST00000585847 FAXDC2Q96IV6 333 aa13.64□□□□□ -0.23
VMP1-202ENST00000585847 FAM84AQ96KN4 292 aa13.64□□□□□ -0.23
VMP1-202ENST00000585847 FNBP1Q96RU3 617 aa13.64□□□□□ -0.23
VMP1-202ENST00000585847 RAD9AQ99638 391 aa13.64□□□□□ -0.23
VMP1-202ENST00000585847 CCDC94Q9BW85 323 aaPredicted RBP13.64□□□□□ -0.23
VMP1-202ENST00000585847 PBX4Q9BYU1 374 aa13.64□□□□□ -0.23
VMP1-202ENST00000585847 FAM124BQ9H5Z6 455 aaPredicted RBP13.64□□□□□ -0.23
VMP1-202ENST00000585847 TMEM8AQ9HCN3 771 aa13.64□□□□□ -0.23
VMP1-202ENST00000585847 CNTN3Q9P232 1028 aa13.64□□□□□ -0.23
VMP1-202ENST00000585847 ESPNB1AK53 854 aa13.63□□□□□ -0.23
VMP1-202ENST00000585847 TLL1O43897 1013 aa13.63□□□□□ -0.23
VMP1-202ENST00000585847 DDHD2O94830 711 aa13.63□□□□□ -0.23
VMP1-202ENST00000585847 KCNE1P15382 129 aa13.63□□□□□ -0.23
VMP1-202ENST00000585847 SOX4Q06945 474 aaPredicted RBP13.63□□□□□ -0.23
VMP1-202ENST00000585847 DSC1Q08554 894 aa13.63□□□□□ -0.23
VMP1-202ENST00000585847 RAB30Q15771 203 aa13.63□□□□□ -0.23
VMP1-202ENST00000585847 GLRA4Q5JXX5 417 aa13.63□□□□□ -0.23
VMP1-202ENST00000585847 CYP26C1Q6V0L0 522 aa13.63□□□□□ -0.23
VMP1-202ENST00000585847 CACNA2D4Q7Z3S7 1137 aa13.63□□□□□ -0.23
VMP1-202ENST00000585847 ZNF280BQ86YH2 543 aa13.63□□□□□ -0.23
VMP1-202ENST00000585847 EFCAB13Q8IY85 973 aa13.63□□□□□ -0.23
VMP1-202ENST00000585847 TC2NQ8N9U0 490 aa13.63□□□□□ -0.23
VMP1-202ENST00000585847 RDH13Q8NBN7 331 aa13.63□□□□□ -0.23
VMP1-202ENST00000585847 PARD3BQ8TEW8 1205 aa13.63□□□□□ -0.23
VMP1-202ENST00000585847 JAKMIP2Q96AA8 810 aa13.63□□□□□ -0.23
VMP1-202ENST00000585847 PPP1R10Q96QC0 940 aaKnown RBP13.63□□□□□ -0.23
VMP1-202ENST00000585847 BAG1Q99933 345 aaPredicted RBP13.63□□□□□ -0.23
VMP1-202ENST00000585847 PRDM12Q9H4Q4 367 aa13.63□□□□□ -0.23
VMP1-202ENST00000585847 NRDE2Q9H7Z3 1164 aa13.63□□□□□ -0.23
VMP1-202ENST00000585847 RPF1Q9H9Y2 349 aaKnown RBP13.63□□□□□ -0.23
VMP1-202ENST00000585847 UBN1Q9NPG3 1134 aa13.63□□□□□ -0.23
VMP1-202ENST00000585847 ABHD10Q9NUJ1 306 aa13.63□□□□□ -0.23
VMP1-202ENST00000585847 TBC1D13Q9NVG8 400 aa13.63□□□□□ -0.23
VMP1-202ENST00000585847 THEGQ9P2T0 379 aa13.63□□□□□ -0.23
VMP1-202ENST00000585847 CACNG4Q9UBN1 327 aa13.63□□□□□ -0.23
VMP1-202ENST00000585847 INPP5FQ9Y2H2 1132 aa13.63□□□□□ -0.23
VMP1-202ENST00000585847 COQ4Q9Y3A0 265 aa13.63□□□□□ -0.23
VMP1-202ENST00000585847 INSL6Q9Y581 213 aa13.63□□□□□ -0.23
VMP1-202ENST00000585847 PCDHA11Q9Y5I1 949 aa13.63□□□□□ -0.23
VMP1-202ENST00000585847 BZW2Q9Y6E2 419 aaKnown RBP13.63□□□□□ -0.23
VMP1-202ENST00000585847 MRPL42Q9Y6G3 142 aaKnown RBP13.63□□□□□ -0.23
VMP1-202ENST00000585847 PTPRJQ12913 1337 aa13.63□□□□□ -0.23
VMP1-202ENST00000585847 SMIM28A0A1B0GU29 152 aa13.62□□□□□ -0.23
VMP1-202ENST00000585847 LINC01553A4QN01 128 aa13.62□□□□□ -0.23
VMP1-202ENST00000585847 HOXA2O43364 376 aa13.62□□□□□ -0.23
VMP1-202ENST00000585847 IPO7O95373 1038 aaKnown RBP13.62□□□□□ -0.23
VMP1-202ENST00000585847 POMCP01189 267 aa13.62□□□□□ -0.23
VMP1-202ENST00000585847 SKILP12757 684 aa13.62□□□□□ -0.23
VMP1-202ENST00000585847 IGFBP4P22692 258 aa13.62□□□□□ -0.23
VMP1-202ENST00000585847 IGFBP6P24592 240 aaPredicted RBP13.62□□□□□ -0.23
VMP1-202ENST00000585847 KRT9P35527 623 aa13.62□□□□□ -0.23
VMP1-202ENST00000585847 MEA1Q16626 185 aa13.62□□□□□ -0.23
VMP1-202ENST00000585847 C1orf220Q5T0J3 134 aa13.62□□□□□ -0.23
VMP1-202ENST00000585847 GLB1LQ6UWU2 654 aa13.62□□□□□ -0.23
VMP1-202ENST00000585847 WDR49Q8IV35 697 aa13.62□□□□□ -0.23
VMP1-202ENST00000585847 CCDC170Q8IYT3 715 aa13.62□□□□□ -0.23
VMP1-202ENST00000585847 HACE1Q8IYU2 909 aa13.62□□□□□ -0.23
VMP1-202ENST00000585847 CACTINQ8WUQ7 758 aaKnown RBP13.62□□□□□ -0.23
VMP1-202ENST00000585847 ATXN2LQ8WWM7 1075 aaKnown RBP13.62□□□□□ -0.23
VMP1-202ENST00000585847 YME1L1Q96TA2 773 aa13.62□□□□□ -0.23
VMP1-202ENST00000585847 MMRN2Q9H8L6 949 aa13.62□□□□□ -0.23
VMP1-202ENST00000585847 PLEKHA5Q9HAU0 1116 aa13.62□□□□□ -0.23
VMP1-202ENST00000585847 PDE11AQ9HCR9 933 aa13.62□□□□□ -0.23
VMP1-202ENST00000585847 RBAKQ9NYW8 714 aaPredicted RBP13.62□□□□□ -0.23
VMP1-202ENST00000585847 GCNT4Q9P109 453 aa13.62□□□□□ -0.23
VMP1-202ENST00000585847 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.62□□□□□ -0.23
VMP1-202ENST00000585847 SCN1AP35498 2009 aa13.61□□□□□ -0.23
VMP1-202ENST00000585847 ZSCAN12O43309 604 aa13.61□□□□□ -0.23
VMP1-202ENST00000585847 NFICP08651 508 aa13.61□□□□□ -0.23
VMP1-202ENST00000585847 COL9A1P20849 921 aa13.61□□□□□ -0.23
VMP1-202ENST00000585847 CASP14P31944 242 aa13.61□□□□□ -0.23
VMP1-202ENST00000585847 GUCY2FP51841 1108 aa13.61□□□□□ -0.23
VMP1-202ENST00000585847 CCDC85BQ15834 202 aaPredicted RBP13.61□□□□□ -0.23
VMP1-202ENST00000585847 JADE1Q6IE81 842 aa13.61□□□□□ -0.23
VMP1-202ENST00000585847 CD300LGQ6UXG3 332 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms