RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 MARCH6O60337 910 aa19.93■□□□□ 0.78
TOP3A-220ENST00000585031 ATF2P15336 505 aa19.93■□□□□ 0.78
TOP3A-220ENST00000585031 ARPP19P56211 112 aa19.93■□□□□ 0.78
TOP3A-220ENST00000585031 STPG1Q5TH74 334 aa19.93■□□□□ 0.78
TOP3A-220ENST00000585031 LOXL4Q96JB6 756 aa19.93■□□□□ 0.78
TOP3A-220ENST00000585031 LRRC3BQ96PB8 259 aa19.93■□□□□ 0.78
TOP3A-220ENST00000585031 SMOC1Q9H4F8 434 aa19.93■□□□□ 0.78
TOP3A-220ENST00000585031 TRPV4Q9HBA0 871 aa19.93■□□□□ 0.78
TOP3A-220ENST00000585031 CYP4F11Q9HBI6 524 aa19.93■□□□□ 0.78
TOP3A-220ENST00000585031 WASF3Q9UPY6 502 aa19.93■□□□□ 0.78
TOP3A-220ENST00000585031 HEPACAM2A8MVW5 462 aa19.92■□□□□ 0.78
TOP3A-220ENST00000585031 ZNF263O14978 683 aa19.92■□□□□ 0.78
TOP3A-220ENST00000585031 PRKCBP05771 671 aa19.92■□□□□ 0.78
TOP3A-220ENST00000585031 STK3Q13188 491 aa19.92■□□□□ 0.78
TOP3A-220ENST00000585031 PDZD4Q76G19 769 aaPredicted RBP19.92■□□□□ 0.78
TOP3A-220ENST00000585031 TTC8Q8TAM2 541 aa19.92■□□□□ 0.78
TOP3A-220ENST00000585031 ZSCAN18Q8TBC5 510 aaPredicted RBP19.92■□□□□ 0.78
TOP3A-220ENST00000585031 TMEM121BQ9BXQ6 578 aaPredicted RBP19.92■□□□□ 0.78
TOP3A-220ENST00000585031 POLD4Q9HCU8 107 aa19.92■□□□□ 0.78
TOP3A-220ENST00000585031 SLC38A8A6NNN8 435 aa19.91■□□□□ 0.78
TOP3A-220ENST00000585031 ZNF197O14709 1029 aa19.91■□□□□ 0.78
TOP3A-220ENST00000585031 SPATA31C1P0DKV0 1188 aa19.91■□□□□ 0.78
TOP3A-220ENST00000585031 ELF1P32519 619 aa19.91■□□□□ 0.78
TOP3A-220ENST00000585031 RAP1GAPP47736 663 aa19.91■□□□□ 0.78
TOP3A-220ENST00000585031 PRPF4BQ13523 1007 aaKnown RBP19.91■□□□□ 0.78
TOP3A-220ENST00000585031 MRPL58Q14197 206 aaKnown RBP19.91■□□□□ 0.78
TOP3A-220ENST00000585031 TEAD2Q15562 447 aa19.91■□□□□ 0.78
TOP3A-220ENST00000585031 NT5DC1Q5TFE4 455 aa19.91■□□□□ 0.78
TOP3A-220ENST00000585031 PKN3Q6P5Z2 889 aa19.91■□□□□ 0.78
TOP3A-220ENST00000585031 CEP68Q76N32 757 aa19.91■□□□□ 0.78
TOP3A-220ENST00000585031 WDR5BQ86VZ2 330 aa19.91■□□□□ 0.78
TOP3A-220ENST00000585031 SLFN12Q8IYM2 578 aa19.91■□□□□ 0.78
TOP3A-220ENST00000585031 FAM177A1Q8N128 213 aaPredicted RBP19.91■□□□□ 0.78
TOP3A-220ENST00000585031 C12orf50Q8NA57 414 aaPredicted RBP19.91■□□□□ 0.78
TOP3A-220ENST00000585031 SMIM28A0A1B0GU29 152 aa19.9■□□□□ 0.78
TOP3A-220ENST00000585031 ACKR2O00590 384 aa19.9■□□□□ 0.78
TOP3A-220ENST00000585031 CDC45O75419 566 aa19.9■□□□□ 0.78
TOP3A-220ENST00000585031 MYL4P12829 197 aa19.9■□□□□ 0.78
TOP3A-220ENST00000585031 LIG1P18858 919 aa19.9■□□□□ 0.78
TOP3A-220ENST00000585031 PXNP49023 591 aaPredicted RBP19.9■□□□□ 0.78
TOP3A-220ENST00000585031 EPHA5P54756 1037 aa19.9■□□□□ 0.78
TOP3A-220ENST00000585031 PLA2G2CQ5R387 149 aa19.9■□□□□ 0.78
TOP3A-220ENST00000585031 TMEM130Q8N3G9 435 aa19.9■□□□□ 0.78
TOP3A-220ENST00000585031 CEP120Q8N960 986 aa19.9■□□□□ 0.78
TOP3A-220ENST00000585031 SHKBP1Q8TBC3 707 aa19.9■□□□□ 0.78
TOP3A-220ENST00000585031 DEPDC1BQ8WUY9 529 aa19.9■□□□□ 0.78
TOP3A-220ENST00000585031 KIFC3Q9BVG8 833 aa19.9■□□□□ 0.78
TOP3A-220ENST00000585031 LRRC3Q9BY71 257 aa19.9■□□□□ 0.78
TOP3A-220ENST00000585031 FBXL5Q9UKA1 691 aa19.9■□□□□ 0.78
TOP3A-220ENST00000585031 PCDHA12Q9UN75 941 aa19.9■□□□□ 0.78
TOP3A-220ENST00000585031 CITO14578 2027 aa19.89■□□□□ 0.77
TOP3A-220ENST00000585031 CPLX1O14810 134 aa19.89■□□□□ 0.77
TOP3A-220ENST00000585031 EXTL3O43909 919 aa19.89■□□□□ 0.77
TOP3A-220ENST00000585031 BAG4O95429 457 aaKnown RBP19.89■□□□□ 0.77
TOP3A-220ENST00000585031 VNN2O95498 520 aa19.89■□□□□ 0.77
TOP3A-220ENST00000585031 TWF1Q12792 350 aa19.89■□□□□ 0.77
TOP3A-220ENST00000585031 NR5A1Q13285 461 aa19.89■□□□□ 0.77
TOP3A-220ENST00000585031 STXBP5Q5T5C0 1151 aa19.89■□□□□ 0.77
TOP3A-220ENST00000585031 ALKAL1Q6UXT8 129 aa19.89■□□□□ 0.77
TOP3A-220ENST00000585031 KBTBD6Q86V97 674 aa19.89■□□□□ 0.77
TOP3A-220ENST00000585031 ZBTB8OSQ8IWT0 167 aa19.89■□□□□ 0.77
TOP3A-220ENST00000585031 TNFRSF25Q93038 417 aa19.89■□□□□ 0.77
TOP3A-220ENST00000585031 ZNF274Q96GC6 653 aaPredicted RBP19.89■□□□□ 0.77
TOP3A-220ENST00000585031 ZFYVE19Q96K21 471 aa19.89■□□□□ 0.77
TOP3A-220ENST00000585031 ZMAT2Q96NC0 199 aaKnown RBP19.89■□□□□ 0.77
TOP3A-220ENST00000585031 MYBPHLA2RUH7 354 aa19.88■□□□□ 0.77
TOP3A-220ENST00000585031 SOBPA7XYQ1 873 aa19.88■□□□□ 0.77
TOP3A-220ENST00000585031 MEFVO15553 781 aaPredicted RBP19.88■□□□□ 0.77
TOP3A-220ENST00000585031 EPN2O95208 641 aa19.88■□□□□ 0.77
TOP3A-220ENST00000585031 LRRC32Q14392 662 aa19.88■□□□□ 0.77
TOP3A-220ENST00000585031 CYP4A22Q5TCH4 519 aa19.88■□□□□ 0.77
TOP3A-220ENST00000585031 C1orf228Q6PIY5 440 aa19.88■□□□□ 0.77
TOP3A-220ENST00000585031 LRSAM1Q6UWE0 723 aa19.88■□□□□ 0.77
TOP3A-220ENST00000585031 RUFY3Q7L099 469 aa19.88■□□□□ 0.77
TOP3A-220ENST00000585031 MSANTD3Q96H12 275 aa19.88■□□□□ 0.77
TOP3A-220ENST00000585031 UROC1Q96N76 676 aa19.88■□□□□ 0.77
TOP3A-220ENST00000585031 TTC12Q9H892 705 aaPredicted RBP19.88■□□□□ 0.77
TOP3A-220ENST00000585031 POLR3BQ9NW08 1133 aaPredicted RBP19.88■□□□□ 0.77
TOP3A-220ENST00000585031 SPECC1L-ADORA2AF8WAN1 911 aa19.87■□□□□ 0.77
TOP3A-220ENST00000585031 GIPC1O14908 333 aa19.87■□□□□ 0.77
TOP3A-220ENST00000585031 TRAPPC3O43617 180 aa19.87■□□□□ 0.77
TOP3A-220ENST00000585031 XRCC6P12956 609 aaKnown RBP eCLIP19.87■□□□□ 0.77
TOP3A-220ENST00000585031 ATP2B1P20020 1258 aa19.87■□□□□ 0.77
TOP3A-220ENST00000585031 CTHP32929 405 aa19.87■□□□□ 0.77
TOP3A-220ENST00000585031 FCHO2Q0JRZ9 810 aa19.87■□□□□ 0.77
TOP3A-220ENST00000585031 CCINQ13939 588 aa19.87■□□□□ 0.77
TOP3A-220ENST00000585031 PON2Q15165 354 aa19.87■□□□□ 0.77
TOP3A-220ENST00000585031 MAPK6Q16659 721 aa19.87■□□□□ 0.77
TOP3A-220ENST00000585031 TMEM132AQ24JP5 1023 aa19.87■□□□□ 0.77
TOP3A-220ENST00000585031 XKR4Q5GH76 650 aa19.87■□□□□ 0.77
TOP3A-220ENST00000585031 PSAPL1Q6NUJ1 521 aa19.87■□□□□ 0.77
TOP3A-220ENST00000585031 RNF19BQ6ZMZ0 732 aa19.87■□□□□ 0.77
TOP3A-220ENST00000585031 CSGALNACT1Q8TDX6 532 aa19.87■□□□□ 0.77
TOP3A-220ENST00000585031 ZNF512Q96ME7 567 aaPredicted RBP19.87■□□□□ 0.77
TOP3A-220ENST00000585031 CCDC43Q96MW1 224 aaKnown RBP19.87■□□□□ 0.77
TOP3A-220ENST00000585031 ADPGKQ9BRR6 497 aa19.87■□□□□ 0.77
TOP3A-220ENST00000585031 MKNK1Q9BUB5 465 aa19.87■□□□□ 0.77
TOP3A-220ENST00000585031 ZSWIM6Q9HCJ5 1215 aa19.87■□□□□ 0.77
TOP3A-220ENST00000585031 GTSE1Q9NYZ3 720 aa19.87■□□□□ 0.77
TOP3A-220ENST00000585031 NUP210Q8TEM1 1887 aaPredicted RBP19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms