RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 GPC5P78333 572 aa10.97□□□□□ -0.65
RFFL-212ENST00000584655 FMO1Q01740 532 aa10.97□□□□□ -0.65
RFFL-212ENST00000584655 UAP1Q16222 522 aaPredicted RBP10.97□□□□□ -0.65
RFFL-212ENST00000584655 ZNF618Q5T7W0 954 aa10.97□□□□□ -0.65
RFFL-212ENST00000584655 SPRYD7Q5W111 196 aa10.97□□□□□ -0.65
RFFL-212ENST00000584655 RUFY4Q6ZNE9 571 aa10.97□□□□□ -0.65
RFFL-212ENST00000584655 TSEN2Q8NCE0 465 aaKnown RBP10.97□□□□□ -0.65
RFFL-212ENST00000584655 DNERQ8NFT8 737 aa10.97□□□□□ -0.65
RFFL-212ENST00000584655 ADPGKQ9BRR6 497 aa10.97□□□□□ -0.65
RFFL-212ENST00000584655 CEP41Q9BYV8 373 aa10.97□□□□□ -0.65
RFFL-212ENST00000584655 AIPL1Q9NZN9 384 aa10.97□□□□□ -0.65
RFFL-212ENST00000584655 GOLGA6BA6NDN3 693 aa10.96□□□□□ -0.65
RFFL-212ENST00000584655 PLA2G6O60733 806 aa10.96□□□□□ -0.65
RFFL-212ENST00000584655 SLC25A27O95847 323 aa10.96□□□□□ -0.65
RFFL-212ENST00000584655 ZNF667Q5HYK9 610 aa10.96□□□□□ -0.65
RFFL-212ENST00000584655 C10orf76Q5T2E6 689 aa10.96□□□□□ -0.65
RFFL-212ENST00000584655 UBAP2Q5T6F2 1119 aaKnown RBP10.96□□□□□ -0.65
RFFL-212ENST00000584655 SH3PXD2AQ5TCZ1 1133 aa10.96□□□□□ -0.65
RFFL-212ENST00000584655 FAXCQ5TGI0 409 aa10.96□□□□□ -0.65
RFFL-212ENST00000584655 TXNRD3NBQ6F5E7 133 aa10.96□□□□□ -0.65
RFFL-212ENST00000584655 ZC3H18Q86VM9 953 aaKnown RBP10.96□□□□□ -0.65
RFFL-212ENST00000584655 LMBR1Q8WVP7 490 aa10.96□□□□□ -0.65
RFFL-212ENST00000584655 FGD4Q96M96 766 aa10.96□□□□□ -0.65
RFFL-212ENST00000584655 CDT1Q9H211 546 aa10.96□□□□□ -0.65
RFFL-212ENST00000584655 STK24Q9Y6E0 443 aa10.96□□□□□ -0.65
RFFL-212ENST00000584655 SSU72P8A0A1W2PR75 194 aa10.96□□□□□ -0.65
RFFL-212ENST00000584655 VNN1O95497 513 aa10.96□□□□□ -0.65
RFFL-212ENST00000584655 ETS1P14921 441 aa10.96□□□□□ -0.65
RFFL-212ENST00000584655 FLT3LGP49771 235 aa10.96□□□□□ -0.65
RFFL-212ENST00000584655 CRELD2Q6UXH1 353 aaPredicted RBP10.96□□□□□ -0.65
RFFL-212ENST00000584655 RSRC2Q7L4I2 434 aaKnown RBP10.96□□□□□ -0.65
RFFL-212ENST00000584655 ANKRD36BP1Q96IX9 119 aa10.96□□□□□ -0.65
RFFL-212ENST00000584655 MAML3Q96JK9 1138 aa10.96□□□□□ -0.65
RFFL-212ENST00000584655 TWNKQ96RR1 684 aa10.96□□□□□ -0.65
RFFL-212ENST00000584655 DHX33Q9H6R0 707 aaKnown RBP10.96□□□□□ -0.65
RFFL-212ENST00000584655 FAM204AQ9H8W3 233 aa10.96□□□□□ -0.65
RFFL-212ENST00000584655 DMAC2Q9NW81 257 aa10.96□□□□□ -0.65
RFFL-212ENST00000584655 KAT6AQ92794 2004 aa10.96□□□□□ -0.66
RFFL-212ENST00000584655 GPS2Q13227 327 aa10.96□□□□□ -0.66
RFFL-212ENST00000584655 CUL2Q13617 745 aa10.96□□□□□ -0.66
RFFL-212ENST00000584655 HDXQ7Z353 690 aa10.96□□□□□ -0.66
RFFL-212ENST00000584655 HELQQ8TDG4 1101 aa10.96□□□□□ -0.66
RFFL-212ENST00000584655 TFAP2BQ92481 460 aa10.96□□□□□ -0.66
RFFL-212ENST00000584655 GPR88Q9GZN0 384 aa10.96□□□□□ -0.66
RFFL-212ENST00000584655 TUBGCP4Q9UGJ1 667 aa10.96□□□□□ -0.66
RFFL-212ENST00000584655 HEY1Q9Y5J3 304 aa10.96□□□□□ -0.66
RFFL-212ENST00000584655 ASB14A6NK59 587 aa10.95□□□□□ -0.66
RFFL-212ENST00000584655 PGRMC1O00264 195 aaKnown RBP10.95□□□□□ -0.66
RFFL-212ENST00000584655 TOM1L1O75674 476 aa10.95□□□□□ -0.66
RFFL-212ENST00000584655 PPP1R37O75864 691 aa10.95□□□□□ -0.66
RFFL-212ENST00000584655 CHRNB2P17787 502 aa10.95□□□□□ -0.66
RFFL-212ENST00000584655 IFNAR2P48551 515 aa10.95□□□□□ -0.66
RFFL-212ENST00000584655 NCKAP1LP55160 1127 aa10.95□□□□□ -0.66
RFFL-212ENST00000584655 MAP9Q49MG5 647 aa10.95□□□□□ -0.66
RFFL-212ENST00000584655 CFAP58Q5T655 872 aa10.95□□□□□ -0.66
RFFL-212ENST00000584655 SEL1L2Q5TEA6 688 aa10.95□□□□□ -0.66
RFFL-212ENST00000584655 SCUBE3Q8IX30 993 aa10.95□□□□□ -0.66
RFFL-212ENST00000584655 RFFLQ8WZ73 363 aa10.95□□□□□ -0.66
RFFL-212ENST00000584655 BORCS6Q96GS4 357 aa10.95□□□□□ -0.66
RFFL-212ENST00000584655 NUCKS1Q9H1E3 243 aaKnown RBP10.95□□□□□ -0.66
RFFL-212ENST00000584655 MAFBQ9Y5Q3 323 aaPredicted RBP10.95□□□□□ -0.66
RFFL-212ENST00000584655 STBD1O95210 358 aa10.95□□□□□ -0.66
RFFL-212ENST00000584655 H2AFXP16104 143 aaPredicted RBP10.95□□□□□ -0.66
RFFL-212ENST00000584655 NAMPTP43490 491 aa10.95□□□□□ -0.66
RFFL-212ENST00000584655 ASTE1Q2TB18 679 aaPredicted RBP10.95□□□□□ -0.66
RFFL-212ENST00000584655 CEP57Q86XR8 500 aa10.95□□□□□ -0.66
RFFL-212ENST00000584655 C12orf42Q96LP6 360 aa10.95□□□□□ -0.66
RFFL-212ENST00000584655 PARK7Q99497 189 aaKnown RBP10.95□□□□□ -0.66
RFFL-212ENST00000584655 FUT8Q9BYC5 575 aa10.95□□□□□ -0.66
RFFL-212ENST00000584655 ARHGAP28Q9P2N2 729 aa10.95□□□□□ -0.66
RFFL-212ENST00000584655 ZNF148Q9UQR1 794 aa10.95□□□□□ -0.66
RFFL-212ENST00000584655 SIPA1L1O43166 1804 aa10.95□□□□□ -0.66
RFFL-212ENST00000584655 CLDN5O00501 218 aa10.95□□□□□ -0.66
RFFL-212ENST00000584655 MAFGO15525 162 aa10.95□□□□□ -0.66
RFFL-212ENST00000584655 FDX1P10109 184 aa10.95□□□□□ -0.66
RFFL-212ENST00000584655 THPOP40225 353 aa10.95□□□□□ -0.66
RFFL-212ENST00000584655 TNNC1P63316 161 aa10.95□□□□□ -0.66
RFFL-212ENST00000584655 ERICH1Q86X53 443 aa10.95□□□□□ -0.66
RFFL-212ENST00000584655 TMEM40Q8WWA1 233 aa10.95□□□□□ -0.66
RFFL-212ENST00000584655 ZNF606Q8WXB4 792 aa10.95□□□□□ -0.66
RFFL-212ENST00000584655 CASKIN2Q8WXE0 1202 aa10.95□□□□□ -0.66
RFFL-212ENST00000584655 KHSRPQ92945 711 aaKnown RBP eCLIP10.95□□□□□ -0.66
RFFL-212ENST00000584655 ARL8AQ96BM9 186 aa10.95□□□□□ -0.66
RFFL-212ENST00000584655 MS4A4AQ96JQ5 239 aa10.95□□□□□ -0.66
RFFL-212ENST00000584655 SELENOSQ9BQE4 189 aa10.95□□□□□ -0.66
RFFL-212ENST00000584655 STIM2Q9P246 746 aa10.95□□□□□ -0.66
RFFL-212ENST00000584655 RSPH14Q9UHP6 348 aa10.95□□□□□ -0.66
RFFL-212ENST00000584655 PRG3Q9Y2Y8 225 aaPredicted RBP10.95□□□□□ -0.66
RFFL-212ENST00000584655 MAST2Q6P0Q8 1798 aa10.94□□□□□ -0.66
RFFL-212ENST00000584655 RNF40O75150 1001 aa10.94□□□□□ -0.66
RFFL-212ENST00000584655 ARHGAP1Q07960 439 aa10.94□□□□□ -0.66
RFFL-212ENST00000584655 DENND1BQ6P3S1 775 aa10.94□□□□□ -0.66
RFFL-212ENST00000584655 DNAJC24Q6P3W2 148 aa10.94□□□□□ -0.66
RFFL-212ENST00000584655 MED10Q9BTT4 135 aa10.94□□□□□ -0.66
RFFL-212ENST00000584655 LTBP3Q9NS15 1303 aa10.94□□□□□ -0.66
RFFL-212ENST00000584655 SZT2Q5T011 3432 aa10.94□□□□□ -0.66
RFFL-212ENST00000584655 HBP1O60381 514 aa10.94□□□□□ -0.66
RFFL-212ENST00000584655 BANF1O75531 89 aa10.94□□□□□ -0.66
RFFL-212ENST00000584655 ATXN1P54253 815 aaKnown RBP10.94□□□□□ -0.66
RFFL-212ENST00000584655 TERF2Q15554 542 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms