RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 C3orf70A6NLC5 250 aaPredicted RBP13.69□□□□□ -0.22
RNF43-208ENST00000584437 EFNA5P52803 228 aa13.69□□□□□ -0.22
RNF43-208ENST00000584437 COPAP53621 1224 aa13.69□□□□□ -0.22
RNF43-208ENST00000584437 C3orf62Q6ZUJ4 267 aa13.69□□□□□ -0.22
RNF43-208ENST00000584437 SRBD1Q8N5C6 995 aaKnown RBP13.69□□□□□ -0.22
RNF43-208ENST00000584437 MMTAG2Q9BU76 263 aaKnown RBP13.69□□□□□ -0.22
RNF43-208ENST00000584437 GABBR1Q9UBS5 961 aa13.69□□□□□ -0.22
RNF43-208ENST00000584437 HSD17B4P51659 736 aa13.69□□□□□ -0.22
RNF43-208ENST00000584437 GRIN1Q05586 938 aa13.69□□□□□ -0.22
RNF43-208ENST00000584437 TTC23LQ6PF05 361 aa13.69□□□□□ -0.22
RNF43-208ENST00000584437 GCNAQ96QF7 691 aa13.69□□□□□ -0.22
RNF43-208ENST00000584437 DCLRE1BQ9H816 532 aa13.69□□□□□ -0.22
RNF43-208ENST00000584437 DTNAQ9Y4J8 743 aa13.69□□□□□ -0.22
RNF43-208ENST00000584437 MBD5Q9P267 1494 aa13.69□□□□□ -0.22
RNF43-208ENST00000584437 MKNK1Q9BUB5 465 aa13.69□□□□□ -0.22
RNF43-208ENST00000584437 POLD4Q9HCU8 107 aa13.69□□□□□ -0.22
RNF43-208ENST00000584437 FAM217BQ9NTX9 383 aaPredicted RBP13.69□□□□□ -0.22
RNF43-208ENST00000584437 SMARCAL1Q9NZC9 954 aa13.69□□□□□ -0.22
RNF43-208ENST00000584437 ALG6Q9Y672 507 aa13.69□□□□□ -0.22
RNF43-208ENST00000584437 F5H423 210 aaPredicted RBP13.69□□□□□ -0.22
RNF43-208ENST00000584437 TBX3O15119 743 aa13.69□□□□□ -0.22
RNF43-208ENST00000584437 COMTP21964 271 aa13.69□□□□□ -0.22
RNF43-208ENST00000584437 COILP38432 576 aaPredicted RBP13.69□□□□□ -0.22
RNF43-208ENST00000584437 GEMIN4P57678 1058 aaKnown RBP13.69□□□□□ -0.22
RNF43-208ENST00000584437 STK4Q13043 487 aa13.69□□□□□ -0.22
RNF43-208ENST00000584437 DDX42Q86XP3 938 aaKnown RBP eCLIP13.69□□□□□ -0.22
RNF43-208ENST00000584437 SUGP1Q8IWZ8 645 aaKnown RBP13.69□□□□□ -0.22
RNF43-208ENST00000584437 KCTD17Q8N5Z5 321 aa13.69□□□□□ -0.22
RNF43-208ENST00000584437 ATXN7L3BQ96GX2 97 aa13.69□□□□□ -0.22
RNF43-208ENST00000584437 RSPH10B2B2RC85 870 aa13.68□□□□□ -0.22
RNF43-208ENST00000584437 P4HA2O15460 535 aa13.68□□□□□ -0.22
RNF43-208ENST00000584437 PDE5AO76074 875 aa13.68□□□□□ -0.22
RNF43-208ENST00000584437 RSPH10BP0C881 870 aa13.68□□□□□ -0.22
RNF43-208ENST00000584437 VCAM1P19320 739 aa13.68□□□□□ -0.22
RNF43-208ENST00000584437 NMT1P30419 496 aaKnown RBP13.68□□□□□ -0.22
RNF43-208ENST00000584437 HMOX2P30519 316 aa13.68□□□□□ -0.22
RNF43-208ENST00000584437 CLK1P49759 484 aaKnown RBP13.68□□□□□ -0.22
RNF43-208ENST00000584437 LAMB3Q13751 1172 aa13.68□□□□□ -0.22
RNF43-208ENST00000584437 RCN1Q15293 331 aa13.68□□□□□ -0.22
RNF43-208ENST00000584437 PPP1R2P1Q96PQ5 205 aa13.68□□□□□ -0.22
RNF43-208ENST00000584437 TMEM117Q9H0C3 514 aa13.68□□□□□ -0.22
RNF43-208ENST00000584437 HSPBP1Q9NZL4 362 aa13.68□□□□□ -0.22
RNF43-208ENST00000584437 MAGI3Q5TCQ9 1506 aa13.68□□□□□ -0.22
RNF43-208ENST00000584437 STRNO43815 780 aa13.68□□□□□ -0.22
RNF43-208ENST00000584437 TRIM16LQ309B1 348 aa13.68□□□□□ -0.22
RNF43-208ENST00000584437 DEPDC1Q5TB30 811 aa13.68□□□□□ -0.22
RNF43-208ENST00000584437 ENGASEQ8NFI3 743 aa13.68□□□□□ -0.22
RNF43-208ENST00000584437 PLEKHG2Q9H7P9 1386 aa13.68□□□□□ -0.22
RNF43-208ENST00000584437 FDX1P10109 184 aa13.68□□□□□ -0.22
RNF43-208ENST00000584437 KLRC1P26715 233 aa13.68□□□□□ -0.22
RNF43-208ENST00000584437 USP10Q14694 798 aaKnown RBP13.68□□□□□ -0.22
RNF43-208ENST00000584437 PDCD6IPQ8WUM4 868 aaKnown RBP13.68□□□□□ -0.22
RNF43-208ENST00000584437 CLMNQ96JQ2 1002 aa13.68□□□□□ -0.22
RNF43-208ENST00000584437 MAGEB18Q96M61 343 aa13.68□□□□□ -0.22
RNF43-208ENST00000584437 SH3GL2Q99962 352 aa13.68□□□□□ -0.22
RNF43-208ENST00000584437 TMBIM4Q9HC24 238 aa13.68□□□□□ -0.22
RNF43-208ENST00000584437 MPP6Q9NZW5 540 aa13.68□□□□□ -0.22
RNF43-208ENST00000584437 CFAP65Q6ZU64 1925 aaKnown RBP13.68□□□□□ -0.22
RNF43-208ENST00000584437 XPO1O14980 1071 aaKnown RBP13.68□□□□□ -0.22
RNF43-208ENST00000584437 COPB2P35606 906 aa13.68□□□□□ -0.22
RNF43-208ENST00000584437 CCDC15Q0P6D6 951 aa13.68□□□□□ -0.22
RNF43-208ENST00000584437 TJAP1Q5JTD0 557 aa13.68□□□□□ -0.22
RNF43-208ENST00000584437 TTC33Q6PID6 262 aaPredicted RBP13.68□□□□□ -0.22
RNF43-208ENST00000584437 EFL1Q7Z2Z2 1120 aaKnown RBP13.68□□□□□ -0.22
RNF43-208ENST00000584437 TRIM69Q86WT6 500 aa13.68□□□□□ -0.22
RNF43-208ENST00000584437 TERB1Q8NA31 727 aa13.68□□□□□ -0.22
RNF43-208ENST00000584437 CELF4Q9BZC1 486 aaKnown RBP13.68□□□□□ -0.22
RNF43-208ENST00000584437 FAM49AQ9H0Q0 323 aaPredicted RBP13.68□□□□□ -0.22
RNF43-208ENST00000584437 MINPP1Q9UNW1 487 aa13.68□□□□□ -0.22
RNF43-208ENST00000584437 CHMP2BQ9UQN3 213 aa13.68□□□□□ -0.22
RNF43-208ENST00000584437 KRR1Q13601 381 aaKnown RBP13.67□□□□□ -0.22
RNF43-208ENST00000584437 SWSAP1Q6NVH7 229 aa13.67□□□□□ -0.22
RNF43-208ENST00000584437 ZNF677Q86XU0 584 aa13.67□□□□□ -0.22
RNF43-208ENST00000584437 ZNF560Q96MR9 790 aa13.67□□□□□ -0.22
RNF43-208ENST00000584437 TASP1Q9H6P5 420 aa13.67□□□□□ -0.22
RNF43-208ENST00000584437 ZNF556Q9HAH1 456 aa13.67□□□□□ -0.22
RNF43-208ENST00000584437 A8MXQ7 604 aa13.67□□□□□ -0.22
RNF43-208ENST00000584437 BNIP3LO60238 219 aa13.67□□□□□ -0.22
RNF43-208ENST00000584437 CDK17Q00537 523 aa13.67□□□□□ -0.22
RNF43-208ENST00000584437 NME3Q13232 169 aa13.67□□□□□ -0.22
RNF43-208ENST00000584437 KBTBD12Q3ZCT8 623 aa13.67□□□□□ -0.22
RNF43-208ENST00000584437 HORMAD1Q86X24 394 aa13.67□□□□□ -0.22
RNF43-208ENST00000584437 PPIL6Q8IXY8 311 aa13.67□□□□□ -0.22
RNF43-208ENST00000584437 NUP93Q8N1F7 819 aa13.67□□□□□ -0.22
RNF43-208ENST00000584437 SLC44A5Q8NCS7 719 aa13.67□□□□□ -0.22
RNF43-208ENST00000584437 TNIP2Q8NFZ5 429 aa13.67□□□□□ -0.22
RNF43-208ENST00000584437 IGDCC4Q8TDY8 1250 aa13.67□□□□□ -0.22
RNF43-208ENST00000584437 CASKIN2Q8WXE0 1202 aa13.67□□□□□ -0.22
RNF43-208ENST00000584437 FAM32AQ9Y421 112 aaKnown RBP13.67□□□□□ -0.22
RNF43-208ENST00000584437 MYO3BQ8WXR4 1341 aa13.67□□□□□ -0.22
RNF43-208ENST00000584437 SNRPFP62306 86 aaKnown RBP13.67□□□□□ -0.22
RNF43-208ENST00000584437 DNAJC3Q13217 504 aa13.67□□□□□ -0.22
RNF43-208ENST00000584437 SLC30A5Q8TAD4 765 aa13.67□□□□□ -0.22
RNF43-208ENST00000584437 MDM1Q8TC05 714 aa13.67□□□□□ -0.22
RNF43-208ENST00000584437 RSAD1Q9HA92 442 aa13.67□□□□□ -0.22
RNF43-208ENST00000584437 PHTF1Q9UMS5 762 aa13.67□□□□□ -0.22
RNF43-208ENST00000584437 PLAGL2Q9UPG8 496 aa13.67□□□□□ -0.22
RNF43-208ENST00000584437 GNAT1P11488 350 aa13.67□□□□□ -0.22
RNF43-208ENST00000584437 C6orf10Q5SRN2 563 aa13.67□□□□□ -0.22
RNF43-208ENST00000584437 TNIP3Q96KP6 325 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms