RNA–Protein interactions for RNA: ENST00000583879.5

VAPA-207, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-207ENST00000583879 GRIK3Q13003 919 aa5.91□□□□□ -1.46
VAPA-207ENST00000583879 FZD5Q13467 585 aa5.91□□□□□ -1.46
VAPA-207ENST00000583879 TFDP1Q14186 410 aa5.91□□□□□ -1.46
VAPA-207ENST00000583879 CTTNQ14247 550 aaKnown RBP5.91□□□□□ -1.46
VAPA-207ENST00000583879 HSP90AA2PQ14568 343 aaPredicted RBP5.91□□□□□ -1.46
VAPA-207ENST00000583879 EMC2Q15006 297 aa5.91□□□□□ -1.46
VAPA-207ENST00000583879 NPY5RQ15761 445 aa5.91□□□□□ -1.46
VAPA-207ENST00000583879 INF2Q27J81 1249 aa5.91□□□□□ -1.46
VAPA-207ENST00000583879 RTP2Q5QGT7 225 aa5.91□□□□□ -1.46
VAPA-207ENST00000583879 PPM1LQ5SGD2 360 aa5.91□□□□□ -1.46
VAPA-207ENST00000583879 LIN9Q5TKA1 542 aa5.91□□□□□ -1.46
VAPA-207ENST00000583879 FAM171A1Q5VUB5 890 aa5.91□□□□□ -1.46
VAPA-207ENST00000583879 PPP4R3AQ6IN85 833 aa5.91□□□□□ -1.46
VAPA-207ENST00000583879 MTSS1LQ765P7 747 aa5.91□□□□□ -1.46
VAPA-207ENST00000583879 PRICKLE2Q7Z3G6 844 aa5.91□□□□□ -1.46
VAPA-207ENST00000583879 KRT25Q7Z3Z0 450 aa5.91□□□□□ -1.46
VAPA-207ENST00000583879 CEP57Q86XR8 500 aa5.91□□□□□ -1.46
VAPA-207ENST00000583879 FAM177A1Q8N128 213 aaPredicted RBP5.91□□□□□ -1.46
VAPA-207ENST00000583879 DAGLBQ8NCG7 672 aa5.91□□□□□ -1.46
VAPA-207ENST00000583879 ITFG1Q8TB96 612 aa5.91□□□□□ -1.46
VAPA-207ENST00000583879 ADAM32Q8TC27 787 aa5.91□□□□□ -1.46
VAPA-207ENST00000583879 PIK3R5Q8WYR1 880 aa5.91□□□□□ -1.46
VAPA-207ENST00000583879 HAS1Q92839 578 aa5.91□□□□□ -1.46
VAPA-207ENST00000583879 CLDN23Q96B33 292 aa5.91□□□□□ -1.46
VAPA-207ENST00000583879 ZNF837Q96EG3 531 aaPredicted RBP5.91□□□□□ -1.46
VAPA-207ENST00000583879 YTHDC1Q96MU7 727 aaKnown RBP5.91□□□□□ -1.46
VAPA-207ENST00000583879 PAAF1Q9BRP4 392 aa5.91□□□□□ -1.46
VAPA-207ENST00000583879 TTPALQ9BTX7 342 aa5.91□□□□□ -1.46
VAPA-207ENST00000583879 PHF20Q9BVI0 1012 aa5.91□□□□□ -1.46
VAPA-207ENST00000583879 NFKBIZQ9BYH8 718 aa5.91□□□□□ -1.46
VAPA-207ENST00000583879 NXF3Q9H4D5 531 aaKnown RBP5.91□□□□□ -1.46
VAPA-207ENST00000583879 KCNMB3Q9NPA1 279 aa5.91□□□□□ -1.46
VAPA-207ENST00000583879 XPNPEP1Q9NQW7 623 aa5.91□□□□□ -1.46
VAPA-207ENST00000583879 KLK14Q9P0G3 267 aa5.91□□□□□ -1.46
VAPA-207ENST00000583879 DNMT3BQ9UBC3 853 aaKnown RBP5.91□□□□□ -1.46
VAPA-207ENST00000583879 PARP2Q9UGN5 583 aa5.91□□□□□ -1.46
VAPA-207ENST00000583879 FBXW11Q9UKB1 542 aa5.91□□□□□ -1.46
VAPA-207ENST00000583879 KCNH3Q9ULD8 1083 aa5.91□□□□□ -1.46
VAPA-207ENST00000583879 POLIQ9UNA4 740 aa5.91□□□□□ -1.46
VAPA-207ENST00000583879 SNX14Q9Y5W7 946 aa5.91□□□□□ -1.46
VAPA-207ENST00000583879 SF3B1O75533 1304 aaKnown RBP eCLIP5.91□□□□□ -1.46
VAPA-207ENST00000583879 RIF1Q5UIP0 2472 aaKnown RBP5.9□□□□□ -1.46
VAPA-207ENST00000583879 DNAH14Q0VDD8 3507 aa5.9□□□□□ -1.46
VAPA-207ENST00000583879 CCDC194A0A1B0GVG4 234 aa5.9□□□□□ -1.46
VAPA-207ENST00000583879 DCDC2BA2VCK2 349 aa5.9□□□□□ -1.46
VAPA-207ENST00000583879 CCL16O15467 120 aa5.9□□□□□ -1.46
VAPA-207ENST00000583879 ADAM12O43184 909 aa5.9□□□□□ -1.46
VAPA-207ENST00000583879 B4GALT5O43286 388 aa5.9□□□□□ -1.46
VAPA-207ENST00000583879 MARCH6O60337 910 aa5.9□□□□□ -1.46
VAPA-207ENST00000583879 CCNT1O60563 726 aaKnown RBP5.9□□□□□ -1.46
VAPA-207ENST00000583879 XYLBO75191 536 aa5.9□□□□□ -1.46
VAPA-207ENST00000583879 ECI2O75521 394 aa5.9□□□□□ -1.46
VAPA-207ENST00000583879 BAG4O95429 457 aaKnown RBP5.9□□□□□ -1.46
VAPA-207ENST00000583879 NPTXRO95502 500 aa5.9□□□□□ -1.46
VAPA-207ENST00000583879 POU2F2P09086 479 aa5.9□□□□□ -1.46
VAPA-207ENST00000583879 GCFC2P16383 781 aaKnown RBP5.9□□□□□ -1.46
VAPA-207ENST00000583879 TARSP26639 723 aaKnown RBP5.9□□□□□ -1.46
VAPA-207ENST00000583879 ARL2P36404 184 aa5.9□□□□□ -1.46
VAPA-207ENST00000583879 IRX6P78412 446 aaPredicted RBP5.9□□□□□ -1.46
VAPA-207ENST00000583879 ADCY1Q08828 1119 aa5.9□□□□□ -1.46
VAPA-207ENST00000583879 ELAVL2Q12926 359 aaKnown RBP5.9□□□□□ -1.46
VAPA-207ENST00000583879 TUSC3Q13454 348 aa5.9□□□□□ -1.46
VAPA-207ENST00000583879 CAPSQ13938 189 aa5.9□□□□□ -1.46
VAPA-207ENST00000583879 RAB33AQ14088 237 aa5.9□□□□□ -1.46
VAPA-207ENST00000583879 PSMD5Q16401 504 aa5.9□□□□□ -1.46
VAPA-207ENST00000583879 AXDND1Q5T1B0 1012 aaPredicted RBP5.9□□□□□ -1.46
VAPA-207ENST00000583879 PDXDC1Q6P996 788 aa5.9□□□□□ -1.46
VAPA-207ENST00000583879 SLC27A1Q6PCB7 646 aa5.9□□□□□ -1.46
VAPA-207ENST00000583879 TSSK4Q6SA08 328 aa5.9□□□□□ -1.46
VAPA-207ENST00000583879 ZNF852Q6ZMS4 543 aa5.9□□□□□ -1.46
VAPA-207ENST00000583879 RTL10Q7L3V2 364 aa5.9□□□□□ -1.46
VAPA-207ENST00000583879 NEK8Q86SG6 692 aa5.9□□□□□ -1.46
VAPA-207ENST00000583879 CDR2LQ86X02 465 aaPredicted RBP5.9□□□□□ -1.46
VAPA-207ENST00000583879 TPH2Q8IWU9 490 aa5.9□□□□□ -1.46
VAPA-207ENST00000583879 ZNF592Q92610 1267 aa5.9□□□□□ -1.46
VAPA-207ENST00000583879 MCRS1Q96EZ8 462 aa5.9□□□□□ -1.46
VAPA-207ENST00000583879 ZNF274Q96GC6 653 aaPredicted RBP5.9□□□□□ -1.46
VAPA-207ENST00000583879 DYDC2Q96IM9 177 aa5.9□□□□□ -1.46
VAPA-207ENST00000583879 PKNOX2Q96KN3 472 aa5.9□□□□□ -1.46
VAPA-207ENST00000583879 HSD17B14Q9BPX1 270 aa5.9□□□□□ -1.46
VAPA-207ENST00000583879 LXNQ9BS40 222 aa5.9□□□□□ -1.46
VAPA-207ENST00000583879 RTKNQ9BST9 563 aa5.9□□□□□ -1.46
VAPA-207ENST00000583879 FAM126AQ9BYI3 521 aaPredicted RBP5.9□□□□□ -1.46
VAPA-207ENST00000583879 EPC1Q9H2F5 836 aa5.9□□□□□ -1.46
VAPA-207ENST00000583879 ANKEF1Q9NU02 776 aa5.9□□□□□ -1.46
VAPA-207ENST00000583879 HCFC1R1Q9NWW0 138 aa5.9□□□□□ -1.46
VAPA-207ENST00000583879 CACNG4Q9UBN1 327 aa5.9□□□□□ -1.46
VAPA-207ENST00000583879 MRPS17Q9Y2R5 130 aaKnown RBP5.9□□□□□ -1.46
VAPA-207ENST00000583879 FAM186AA6NE01 2351 aa5.9□□□□□ -1.46
VAPA-207ENST00000583879 CASTOR2A6NHX0 329 aa5.89□□□□□ -1.47
VAPA-207ENST00000583879 SHISA7A6NL88 538 aa5.89□□□□□ -1.47
VAPA-207ENST00000583879 K7ELQ4 463 aaPredicted RBP5.89□□□□□ -1.47
VAPA-207ENST00000583879 ERVH48-1M5A8F1 160 aa5.89□□□□□ -1.47
VAPA-207ENST00000583879 CPLX1O14810 134 aa5.89□□□□□ -1.47
VAPA-207ENST00000583879 LILRA1O75019 489 aa5.89□□□□□ -1.47
VAPA-207ENST00000583879 CDC45O75419 566 aa5.89□□□□□ -1.47
VAPA-207ENST00000583879 KIF4AO95239 1232 aa5.89□□□□□ -1.47
VAPA-207ENST00000583879 LYPLA2O95372 231 aa5.89□□□□□ -1.47
VAPA-207ENST00000583879 PROCP04070 461 aa5.89□□□□□ -1.47
VAPA-207ENST00000583879 ITGB2P05107 769 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms