RNA–Protein interactions for RNA: ENST00000583753.5

RNF43-207, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-207ENST00000583753 C1orf146Q5VVC0 180 aa11.19□□□□□ -0.62
RNF43-207ENST00000583753 C1orf186Q6ZWK4 172 aa11.19□□□□□ -0.62
RNF43-207ENST00000583753 EEPD1Q7L9B9 569 aa11.19□□□□□ -0.62
RNF43-207ENST00000583753 OTOP1Q7RTM1 612 aa11.19□□□□□ -0.62
RNF43-207ENST00000583753 SDCCAG8Q86SQ7 713 aaPredicted RBP11.19□□□□□ -0.62
RNF43-207ENST00000583753 ETNPPLQ8TBG4 499 aa11.19□□□□□ -0.62
RNF43-207ENST00000583753 LRRN4Q8WUT4 740 aa11.19□□□□□ -0.62
RNF43-207ENST00000583753 CENPTQ96BT3 561 aa11.19□□□□□ -0.62
RNF43-207ENST00000583753 PPP1R36Q96LQ0 422 aa11.19□□□□□ -0.62
RNF43-207ENST00000583753 MAGEB18Q96M61 343 aa11.19□□□□□ -0.62
RNF43-207ENST00000583753 FHDC1Q9C0D6 1143 aaPredicted RBP11.19□□□□□ -0.62
RNF43-207ENST00000583753 CNOT7Q9UIV1 285 aaKnown RBP11.19□□□□□ -0.62
RNF43-207ENST00000583753 ZMYND8Q9ULU4 1186 aaPredicted RBP11.19□□□□□ -0.62
RNF43-207ENST00000583753 HEY1Q9Y5J3 304 aa11.19□□□□□ -0.62
RNF43-207ENST00000583753 AFF2P51816 1311 aa11.18□□□□□ -0.62
RNF43-207ENST00000583753 SPATA31A1Q5TZJ5 1347 aa11.18□□□□□ -0.62
RNF43-207ENST00000583753 B2RBV5 119 aa11.18□□□□□ -0.62
RNF43-207ENST00000583753 STAM2O75886 525 aa11.18□□□□□ -0.62
RNF43-207ENST00000583753 PECAM1P16284 738 aaPredicted RBP11.18□□□□□ -0.62
RNF43-207ENST00000583753 ANXA13P27216 316 aa11.18□□□□□ -0.62
RNF43-207ENST00000583753 MARK3P27448 753 aa11.18□□□□□ -0.62
RNF43-207ENST00000583753 SREBF1P36956 1147 aa11.18□□□□□ -0.62
RNF43-207ENST00000583753 MPP2Q14168 576 aa11.18□□□□□ -0.62
RNF43-207ENST00000583753 DARS2Q6PI48 645 aaKnown RBP11.18□□□□□ -0.62
RNF43-207ENST00000583753 PIGWQ7Z7B1 504 aa11.18□□□□□ -0.62
RNF43-207ENST00000583753 SLFN11Q7Z7L1 901 aa11.18□□□□□ -0.62
RNF43-207ENST00000583753 CDR2LQ86X02 465 aaPredicted RBP11.18□□□□□ -0.62
RNF43-207ENST00000583753 PDIK1LQ8N165 341 aa11.18□□□□□ -0.62
RNF43-207ENST00000583753 IWS1Q96ST2 819 aa11.18□□□□□ -0.62
RNF43-207ENST00000583753 A1CFQ9NQ94 594 aaKnown RBP11.18□□□□□ -0.62
RNF43-207ENST00000583753 IRAK4Q9NWZ3 460 aa11.18□□□□□ -0.62
RNF43-207ENST00000583753 SEL1LQ9UBV2 794 aa11.18□□□□□ -0.62
RNF43-207ENST00000583753 NKX1-2Q9UD57 310 aaPredicted RBP11.18□□□□□ -0.62
RNF43-207ENST00000583753 KIF1AQ12756 1690 aa11.18□□□□□ -0.62
RNF43-207ENST00000583753 C5orf60A6NFR6 353 aa11.18□□□□□ -0.62
RNF43-207ENST00000583753 P4HBP07237 508 aaKnown RBP11.18□□□□□ -0.62
RNF43-207ENST00000583753 FOXN2P32314 431 aa11.18□□□□□ -0.62
RNF43-207ENST00000583753 POLGP54098 1239 aaPredicted RBP11.18□□□□□ -0.62
RNF43-207ENST00000583753 JAM2P57087 298 aa11.18□□□□□ -0.62
RNF43-207ENST00000583753 IRX1P78414 480 aaPredicted RBP11.18□□□□□ -0.62
RNF43-207ENST00000583753 HIF1AQ16665 826 aa11.18□□□□□ -0.62
RNF43-207ENST00000583753 ACAD10Q6JQN1 1059 aa11.18□□□□□ -0.62
RNF43-207ENST00000583753 LRRC6Q86X45 466 aa11.18□□□□□ -0.62
RNF43-207ENST00000583753 AGGF1Q8N302 714 aaeCLIP11.18□□□□□ -0.62
RNF43-207ENST00000583753 ZNF570Q96NI8 536 aa11.18□□□□□ -0.62
RNF43-207ENST00000583753 POLR3CQ9BUI4 534 aaPredicted RBP11.18□□□□□ -0.62
RNF43-207ENST00000583753 MRPL47Q9HD33 250 aaKnown RBP11.18□□□□□ -0.62
RNF43-207ENST00000583753 TUFT1Q9NNX1 390 aa11.18□□□□□ -0.62
RNF43-207ENST00000583753 PRM3Q9NNZ6 103 aa11.18□□□□□ -0.62
RNF43-207ENST00000583753 KCNH7Q9NS40 1196 aa11.18□□□□□ -0.62
RNF43-207ENST00000583753 UVRAGQ9P2Y5 699 aa11.18□□□□□ -0.62
RNF43-207ENST00000583753 GABBR1Q9UBS5 961 aa11.18□□□□□ -0.62
RNF43-207ENST00000583753 DNPEPQ9ULA0 475 aa11.18□□□□□ -0.62
RNF43-207ENST00000583753 SLC4A7Q9Y6M7 1214 aa11.18□□□□□ -0.62
RNF43-207ENST00000583753 N4BP2Q86UW6 1770 aaPredicted RBP11.18□□□□□ -0.62
RNF43-207ENST00000583753 ATXN2Q99700 1313 aaKnown RBP11.18□□□□□ -0.62
RNF43-207ENST00000583753 SYNJ2BP-COX16A0A087WUM0 186 aa11.18□□□□□ -0.62
RNF43-207ENST00000583753 EIF3DO15371 548 aaKnown RBP eCLIP11.18□□□□□ -0.62
RNF43-207ENST00000583753 NCF2P19878 526 aaPredicted RBP11.18□□□□□ -0.62
RNF43-207ENST00000583753 PSMA2P25787 234 aa11.18□□□□□ -0.62
RNF43-207ENST00000583753 RANBP1P43487 201 aa11.18□□□□□ -0.62
RNF43-207ENST00000583753 MARSP56192 900 aaKnown RBP11.18□□□□□ -0.62
RNF43-207ENST00000583753 SLC8A3P57103 927 aa11.18□□□□□ -0.62
RNF43-207ENST00000583753 GRAMD1BQ3KR37 738 aa11.18□□□□□ -0.62
RNF43-207ENST00000583753 WLSQ5T9L3 541 aa11.18□□□□□ -0.62
RNF43-207ENST00000583753 SV2AQ7L0J3 742 aa11.18□□□□□ -0.62
RNF43-207ENST00000583753 ARHGAP24Q8N264 748 aa11.18□□□□□ -0.62
RNF43-207ENST00000583753 EIF1ADQ8N9N8 165 aaKnown RBP11.18□□□□□ -0.62
RNF43-207ENST00000583753 KCTD6Q8NC69 237 aa11.18□□□□□ -0.62
RNF43-207ENST00000583753 FBXO41Q8TF61 875 aa11.18□□□□□ -0.62
RNF43-207ENST00000583753 SEMA4DQ92854 862 aa11.18□□□□□ -0.62
RNF43-207ENST00000583753 ART4Q93070 314 aa11.18□□□□□ -0.62
RNF43-207ENST00000583753 P2RX7Q99572 595 aaKnown RBP11.18□□□□□ -0.62
RNF43-207ENST00000583753 PAGR1Q9BTK6 254 aa11.18□□□□□ -0.62
RNF43-207ENST00000583753 TSSK1BQ9BXA7 367 aa11.18□□□□□ -0.62
RNF43-207ENST00000583753 DCLK3Q9C098 648 aa11.18□□□□□ -0.62
RNF43-207ENST00000583753 FBXO6Q9NRD1 293 aaPredicted RBP11.18□□□□□ -0.62
RNF43-207ENST00000583753 OLFML3Q9NRN5 406 aa11.18□□□□□ -0.62
RNF43-207ENST00000583753 COX16Q9P0S2 106 aa11.18□□□□□ -0.62
RNF43-207ENST00000583753 PCDHA3Q9Y5H8 950 aa11.18□□□□□ -0.62
RNF43-207ENST00000583753 ZHX2Q9Y6X8 837 aa11.18□□□□□ -0.62
RNF43-207ENST00000583753 BTNL10A8MVZ5 291 aa11.17□□□□□ -0.62
RNF43-207ENST00000583753 TBX3O15119 743 aa11.17□□□□□ -0.62
RNF43-207ENST00000583753 EDIL3O43854 480 aa11.17□□□□□ -0.62
RNF43-207ENST00000583753 TJP3O95049 919 aa11.17□□□□□ -0.62
RNF43-207ENST00000583753 ADRB2P07550 413 aa11.17□□□□□ -0.62
RNF43-207ENST00000583753 TFDP1Q14186 410 aa11.17□□□□□ -0.62
RNF43-207ENST00000583753 DLGAP5Q15398 846 aa11.17□□□□□ -0.62
RNF43-207ENST00000583753 AOC3Q16853 763 aa11.17□□□□□ -0.62
RNF43-207ENST00000583753 C11orf63Q6NUN7 778 aa11.17□□□□□ -0.62
RNF43-207ENST00000583753 SWSAP1Q6NVH7 229 aa11.17□□□□□ -0.62
RNF43-207ENST00000583753 VSTM1Q6UX27 236 aa11.17□□□□□ -0.62
RNF43-207ENST00000583753 SMC1BQ8NDV3 1235 aa11.17□□□□□ -0.62
RNF43-207ENST00000583753 TMEM143Q96AN5 459 aa11.17□□□□□ -0.62
RNF43-207ENST00000583753 FGD4Q96M96 766 aa11.17□□□□□ -0.62
RNF43-207ENST00000583753 TXNDC16Q9P2K2 825 aa11.17□□□□□ -0.62
RNF43-207ENST00000583753 LOC100653049A0A140TA62 436 aa11.17□□□□□ -0.62
RNF43-207ENST00000583753 GTPBP10A4D1E9 387 aaKnown RBP11.17□□□□□ -0.62
RNF43-207ENST00000583753 COPEO14579 308 aa11.17□□□□□ -0.62
RNF43-207ENST00000583753 TRPA1O75762 1119 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms