RNA–Protein interactions for RNA: ENST00000583391.1

ERBB2-215, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-215ENST00000583391 ZNF516Q92618 1163 aa14.07□□□□□ -0.16
ERBB2-215ENST00000583391 FAM161BQ96MY7 647 aa14.07□□□□□ -0.16
ERBB2-215ENST00000583391 BPIFA3Q9BQP9 254 aa14.07□□□□□ -0.16
ERBB2-215ENST00000583391 COLEC11Q9BWP8 271 aa14.07□□□□□ -0.16
ERBB2-215ENST00000583391 ALG13Q9NP73 1137 aaKnown RBP14.07□□□□□ -0.16
ERBB2-215ENST00000583391 SIX4Q9UIU6 781 aa14.07□□□□□ -0.16
ERBB2-215ENST00000583391 ITGA11Q9UKX5 1188 aa14.07□□□□□ -0.16
ERBB2-215ENST00000583391 NUB1Q9Y5A7 615 aa14.07□□□□□ -0.16
ERBB2-215ENST00000583391 MYH10P35580 1976 aa14.06□□□□□ -0.16
ERBB2-215ENST00000583391 ANO9A1A5B4 782 aa14.06□□□□□ -0.16
ERBB2-215ENST00000583391 TMEM189-UBE2V1I3L0A0 370 aa14.06□□□□□ -0.16
ERBB2-215ENST00000583391 RFXAPO00287 272 aa14.06□□□□□ -0.16
ERBB2-215ENST00000583391 PHACTR2O75167 634 aa14.06□□□□□ -0.16
ERBB2-215ENST00000583391 TADA2AO75478 443 aa14.06□□□□□ -0.16
ERBB2-215ENST00000583391 RB1P06400 928 aa14.06□□□□□ -0.16
ERBB2-215ENST00000583391 MTIF2P46199 727 aaKnown RBP14.06□□□□□ -0.16
ERBB2-215ENST00000583391 BRCC3P46736 316 aa14.06□□□□□ -0.16
ERBB2-215ENST00000583391 MXI1P50539 228 aa14.06□□□□□ -0.16
ERBB2-215ENST00000583391 AP3M2P53677 418 aa14.06□□□□□ -0.16
ERBB2-215ENST00000583391 MARSP56192 900 aaKnown RBP14.06□□□□□ -0.16
ERBB2-215ENST00000583391 CLDN10P78369 228 aa14.06□□□□□ -0.16
ERBB2-215ENST00000583391 ENPEPQ07075 957 aa14.06□□□□□ -0.16
ERBB2-215ENST00000583391 PPP3CAQ08209 521 aa14.06□□□□□ -0.16
ERBB2-215ENST00000583391 FUT10Q6P4F1 479 aa14.06□□□□□ -0.16
ERBB2-215ENST00000583391 Q7L0L9 218 aa14.06□□□□□ -0.16
ERBB2-215ENST00000583391 TRAPPC11Q7Z392 1133 aa14.06□□□□□ -0.16
ERBB2-215ENST00000583391 TRIM59Q8IWR1 403 aa14.06□□□□□ -0.16
ERBB2-215ENST00000583391 DHX40Q8IX18 779 aaKnown RBP14.06□□□□□ -0.16
ERBB2-215ENST00000583391 SLC35C1Q96A29 364 aa14.06□□□□□ -0.16
ERBB2-215ENST00000583391 ZNF560Q96MR9 790 aa14.06□□□□□ -0.16
ERBB2-215ENST00000583391 VN1R3Q9BXE9 311 aa14.06□□□□□ -0.16
ERBB2-215ENST00000583391 TSPY26PQ9H489 355 aa14.06□□□□□ -0.16
ERBB2-215ENST00000583391 PRDM12Q9H4Q4 367 aa14.06□□□□□ -0.16
ERBB2-215ENST00000583391 FANCLQ9NW38 375 aa14.06□□□□□ -0.16
ERBB2-215ENST00000583391 MAGEC2Q9UBF1 373 aaPredicted RBP14.06□□□□□ -0.16
ERBB2-215ENST00000583391 AGAP1Q9UPQ3 857 aa14.06□□□□□ -0.16
ERBB2-215ENST00000583391 SF3B1O75533 1304 aaKnown RBP eCLIP14.06□□□□□ -0.16
ERBB2-215ENST00000583391 KCNJ18B7U540 433 aa14.05□□□□□ -0.16
ERBB2-215ENST00000583391 H3BNC9 293 aa14.05□□□□□ -0.16
ERBB2-215ENST00000583391 I3L4J1 428 aa14.05□□□□□ -0.16
ERBB2-215ENST00000583391 PIRO00625 290 aa14.05□□□□□ -0.16
ERBB2-215ENST00000583391 IKBKBO14920 756 aa14.05□□□□□ -0.16
ERBB2-215ENST00000583391 GRM6O15303 877 aa14.05□□□□□ -0.16
ERBB2-215ENST00000583391 STX10O60499 249 aa14.05□□□□□ -0.16
ERBB2-215ENST00000583391 PIK3CAP42336 1068 aa14.05□□□□□ -0.16
ERBB2-215ENST00000583391 FXR1P51114 621 aaKnown RBP eCLIP14.05□□□□□ -0.16
ERBB2-215ENST00000583391 TRPC3Q13507 836 aa14.05□□□□□ -0.16
ERBB2-215ENST00000583391 KCNJ12Q14500 433 aa14.05□□□□□ -0.16
ERBB2-215ENST00000583391 NCAPHQ15003 741 aa14.05□□□□□ -0.16
ERBB2-215ENST00000583391 ZACNQ401N2 412 aa14.05□□□□□ -0.16
ERBB2-215ENST00000583391 CDKAL1Q5VV42 579 aa14.05□□□□□ -0.16
ERBB2-215ENST00000583391 DCLRE1AQ6PJP8 1040 aa14.05□□□□□ -0.16
ERBB2-215ENST00000583391 CD300LGQ6UXG3 332 aa14.05□□□□□ -0.16
ERBB2-215ENST00000583391 SV2AQ7L0J3 742 aa14.05□□□□□ -0.16
ERBB2-215ENST00000583391 GPR62Q9BZJ7 368 aa14.05□□□□□ -0.16
ERBB2-215ENST00000583391 CBX8Q9HC52 389 aa14.05□□□□□ -0.16
ERBB2-215ENST00000583391 TMEM8AQ9HCN3 771 aa14.05□□□□□ -0.16
ERBB2-215ENST00000583391 R3HCC1Q9Y3T6 440 aaKnown RBP14.05□□□□□ -0.16
ERBB2-215ENST00000583391 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.05□□□□□ -0.16
ERBB2-215ENST00000583391 MTCL1Q9Y4B5 1905 aaKnown RBP14.05□□□□□ -0.16
ERBB2-215ENST00000583391 BECN2A8MW95 431 aa14.04□□□□□ -0.16
ERBB2-215ENST00000583391 VNN1O95497 513 aa14.04□□□□□ -0.16
ERBB2-215ENST00000583391 HLA-DRAP01903 254 aa14.04□□□□□ -0.16
ERBB2-215ENST00000583391 C4BPAP04003 597 aaKnown RBP14.04□□□□□ -0.16
ERBB2-215ENST00000583391 DNAJB1P25685 340 aa14.04□□□□□ -0.16
ERBB2-215ENST00000583391 CA8P35219 290 aa14.04□□□□□ -0.16
ERBB2-215ENST00000583391 TAF6P49848 677 aa14.04□□□□□ -0.16
ERBB2-215ENST00000583391 ZNF445P59923 1031 aa14.04□□□□□ -0.16
ERBB2-215ENST00000583391 RBP5P82980 135 aa14.04□□□□□ -0.16
ERBB2-215ENST00000583391 MYL7Q01449 175 aa14.04□□□□□ -0.16
ERBB2-215ENST00000583391 PLCB3Q01970 1234 aa14.04□□□□□ -0.16
ERBB2-215ENST00000583391 KRT17Q04695 432 aa14.04□□□□□ -0.16
ERBB2-215ENST00000583391 NCOA4Q13772 614 aa14.04□□□□□ -0.16
ERBB2-215ENST00000583391 GRIN2CQ14957 1233 aa14.04□□□□□ -0.16
ERBB2-215ENST00000583391 SV2CQ496J9 727 aa14.04□□□□□ -0.16
ERBB2-215ENST00000583391 CBWD6Q4V339 395 aa14.04□□□□□ -0.16
ERBB2-215ENST00000583391 CBWD3Q5JTY5 395 aa14.04□□□□□ -0.16
ERBB2-215ENST00000583391 CBWD5Q5RIA9 395 aa14.04□□□□□ -0.16
ERBB2-215ENST00000583391 KRT39Q6A163 491 aa14.04□□□□□ -0.16
ERBB2-215ENST00000583391 C15orf39Q6ZRI6 1047 aa14.04□□□□□ -0.16
ERBB2-215ENST00000583391 DDX53Q86TM3 631 aaKnown RBP14.04□□□□□ -0.16
ERBB2-215ENST00000583391 LUZP1Q86V48 1076 aa14.04□□□□□ -0.16
ERBB2-215ENST00000583391 CXorf38Q8TB03 319 aa14.04□□□□□ -0.16
ERBB2-215ENST00000583391 FAM200AQ8TCP9 573 aa14.04□□□□□ -0.16
ERBB2-215ENST00000583391 SPPL3Q8TCT6 385 aa14.04□□□□□ -0.16
ERBB2-215ENST00000583391 POF1BQ8WVV4 589 aa14.04□□□□□ -0.16
ERBB2-215ENST00000583391 B3GALT6Q96L58 329 aa14.04□□□□□ -0.16
ERBB2-215ENST00000583391 HERC2P3Q9BVR0 1158 aa14.04□□□□□ -0.16
ERBB2-215ENST00000583391 ENTPD7Q9NQZ7 604 aa14.04□□□□□ -0.16
ERBB2-215ENST00000583391 TLR9Q9NR96 1032 aa14.04□□□□□ -0.16
ERBB2-215ENST00000583391 BRWD1Q9NSI6 2320 aa14.03□□□□□ -0.16
ERBB2-215ENST00000583391 SMTNL1A8MU46 457 aa14.03□□□□□ -0.16
ERBB2-215ENST00000583391 SPTLC1O15269 473 aa14.03□□□□□ -0.16
ERBB2-215ENST00000583391 CAVIN2O95810 425 aa14.03□□□□□ -0.16
ERBB2-215ENST00000583391 AFPP02771 609 aaKnown RBP14.03□□□□□ -0.16
ERBB2-215ENST00000583391 SOD2P04179 222 aa14.03□□□□□ -0.16
ERBB2-215ENST00000583391 PRKCSHP14314 528 aaPredicted RBP14.03□□□□□ -0.16
ERBB2-215ENST00000583391 EEF1GP26641 437 aaKnown RBP14.03□□□□□ -0.16
ERBB2-215ENST00000583391 GTF2H1P32780 548 aa14.03□□□□□ -0.16
ERBB2-215ENST00000583391 PNPLA4P41247 253 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms