RNA–Protein interactions for RNA: ENST00000582376.1

GGA3-212, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-212ENST00000582376 USP39Q53GS9 565 aaKnown RBP10.21□□□□□ -0.77
GGA3-212ENST00000582376 FSTL4Q6MZW2 842 aa10.21□□□□□ -0.77
GGA3-212ENST00000582376 SYNE3Q6ZMZ3 975 aa10.21□□□□□ -0.77
GGA3-212ENST00000582376 CDR2LQ86X02 465 aaPredicted RBP10.21□□□□□ -0.77
GGA3-212ENST00000582376 GPIHBP1Q8IV16 184 aa10.21□□□□□ -0.77
GGA3-212ENST00000582376 ARID3BQ8IVW6 561 aaPredicted RBP10.21□□□□□ -0.77
GGA3-212ENST00000582376 PLEKHM2Q8IWE5 1019 aa10.21□□□□□ -0.77
GGA3-212ENST00000582376 REXO1Q8N1G1 1221 aaKnown RBP10.21□□□□□ -0.77
GGA3-212ENST00000582376 SHKBP1Q8TBC3 707 aa10.21□□□□□ -0.77
GGA3-212ENST00000582376 CCDC136Q96JN2 1154 aa10.21□□□□□ -0.77
GGA3-212ENST00000582376 C6orf50Q9HD87 102 aa10.21□□□□□ -0.77
GGA3-212ENST00000582376 CEP72Q9P209 647 aa10.21□□□□□ -0.77
GGA3-212ENST00000582376 ESYT2A0FGR8 921 aa10.2□□□□□ -0.78
GGA3-212ENST00000582376 J3QKU1 62 aa10.2□□□□□ -0.78
GGA3-212ENST00000582376 ADAMTS3O15072 1205 aa10.2□□□□□ -0.78
GGA3-212ENST00000582376 ATXN7O15265 892 aaPredicted RBP10.2□□□□□ -0.78
GGA3-212ENST00000582376 APC2O95996 2303 aa10.2□□□□□ -0.78
GGA3-212ENST00000582376 PRKCBP05771 671 aa10.2□□□□□ -0.78
GGA3-212ENST00000582376 ATXN3P54252 364 aaPredicted RBP10.2□□□□□ -0.78
GGA3-212ENST00000582376 MBTD1Q05BQ5 628 aa10.2□□□□□ -0.78
GGA3-212ENST00000582376 FUT2Q10981 343 aa10.2□□□□□ -0.78
GGA3-212ENST00000582376 TFDP1Q14186 410 aa10.2□□□□□ -0.78
GGA3-212ENST00000582376 EMC2Q15006 297 aa10.2□□□□□ -0.78
GGA3-212ENST00000582376 NAB2Q15742 525 aa10.2□□□□□ -0.78
GGA3-212ENST00000582376 IFNLR1Q8IU57 520 aaPredicted RBP10.2□□□□□ -0.78
GGA3-212ENST00000582376 ABCA7Q8IZY2 2146 aa10.2□□□□□ -0.78
GGA3-212ENST00000582376 ZNF579Q8NAF0 562 aaKnown RBP10.2□□□□□ -0.78
GGA3-212ENST00000582376 ADAMTS14Q8WXS8 1223 aa10.2□□□□□ -0.78
GGA3-212ENST00000582376 LRRC3BQ96PB8 259 aa10.2□□□□□ -0.78
GGA3-212ENST00000582376 ZMYND12Q9H0C1 365 aa10.2□□□□□ -0.78
GGA3-212ENST00000582376 OBP2AQ9NY56 170 aa10.2□□□□□ -0.78
GGA3-212ENST00000582376 LOC400499M0QZD8 3231 aa10.2□□□□□ -0.78
GGA3-212ENST00000582376 THADAQ6YHU6 1953 aa10.19□□□□□ -0.78
GGA3-212ENST00000582376 A0A1W2PRU2 124 aa10.19□□□□□ -0.78
GGA3-212ENST00000582376 TRDMT1O14717 391 aaKnown RBP10.19□□□□□ -0.78
GGA3-212ENST00000582376 B4GALT5O43286 388 aa10.19□□□□□ -0.78
GGA3-212ENST00000582376 DKC1O60832 514 aaKnown RBP eCLIP10.19□□□□□ -0.78
GGA3-212ENST00000582376 EGFP01133 1207 aa10.19□□□□□ -0.78
GGA3-212ENST00000582376 BCKDHBP21953 392 aa10.19□□□□□ -0.78
GGA3-212ENST00000582376 IGFBP6P24592 240 aaPredicted RBP10.19□□□□□ -0.78
GGA3-212ENST00000582376 CACNB1Q02641 598 aaPredicted RBP10.19□□□□□ -0.78
GGA3-212ENST00000582376 POU5F1BQ06416 359 aa10.19□□□□□ -0.78
GGA3-212ENST00000582376 DMC1Q14565 340 aa10.19□□□□□ -0.78
GGA3-212ENST00000582376 MXD4Q14582 209 aaPredicted RBP10.19□□□□□ -0.78
GGA3-212ENST00000582376 TPGS2Q68CL5 300 aa10.19□□□□□ -0.78
GGA3-212ENST00000582376 B3GNT9Q6UX72 402 aa10.19□□□□□ -0.78
GGA3-212ENST00000582376 SYT13Q7L8C5 426 aa10.19□□□□□ -0.78
GGA3-212ENST00000582376 BPIFB1Q8TDL5 484 aa10.19□□□□□ -0.78
GGA3-212ENST00000582376 RUFY2Q8WXA3 655 aa10.19□□□□□ -0.78
GGA3-212ENST00000582376 ACDQ96AP0 544 aa10.19□□□□□ -0.78
GGA3-212ENST00000582376 CRELD1Q96HD1 420 aa10.19□□□□□ -0.78
GGA3-212ENST00000582376 MTRQ99707 1265 aa10.19□□□□□ -0.78
GGA3-212ENST00000582376 HNRNPABQ99729 332 aaKnown RBP10.19□□□□□ -0.78
GGA3-212ENST00000582376 DACH1Q9UI36 760 aa10.19□□□□□ -0.78
GGA3-212ENST00000582376 TPCN1Q9ULQ1 816 aa10.19□□□□□ -0.78
GGA3-212ENST00000582376 URB1O60287 2271 aaKnown RBP10.19□□□□□ -0.78
GGA3-212ENST00000582376 ATG2BQ96BY7 2078 aa10.19□□□□□ -0.78
GGA3-212ENST00000582376 A0A1B0GUA9 196 aa10.18□□□□□ -0.78
GGA3-212ENST00000582376 H7C4K7 107 aa10.18□□□□□ -0.78
GGA3-212ENST00000582376 I3L4J1 428 aa10.18□□□□□ -0.78
GGA3-212ENST00000582376 ARHGAP6O43182 974 aa10.18□□□□□ -0.78
GGA3-212ENST00000582376 EDIL3O43854 480 aa10.18□□□□□ -0.78
GGA3-212ENST00000582376 OPHN1O60890 802 aa10.18□□□□□ -0.78
GGA3-212ENST00000582376 RECQL4O94761 1208 aa10.18□□□□□ -0.78
GGA3-212ENST00000582376 GNA11P29992 359 aa10.18□□□□□ -0.78
GGA3-212ENST00000582376 BRCC3P46736 316 aa10.18□□□□□ -0.78
GGA3-212ENST00000582376 QARSP47897 775 aaKnown RBP10.18□□□□□ -0.78
GGA3-212ENST00000582376 USP11P51784 963 aa10.18□□□□□ -0.78
GGA3-212ENST00000582376 MAPK6Q16659 721 aa10.18□□□□□ -0.78
GGA3-212ENST00000582376 RTN1Q16799 776 aa10.18□□□□□ -0.78
GGA3-212ENST00000582376 FBXO43Q4G163 708 aa10.18□□□□□ -0.78
GGA3-212ENST00000582376 STXBP5Q5T5C0 1151 aa10.18□□□□□ -0.78
GGA3-212ENST00000582376 CD300LGQ6UXG3 332 aa10.18□□□□□ -0.78
GGA3-212ENST00000582376 SGMS1Q86VZ5 419 aa10.18□□□□□ -0.78
GGA3-212ENST00000582376 TSTD1Q8NFU3 115 aa10.18□□□□□ -0.78
GGA3-212ENST00000582376 RPLP0P6Q8NHW5 317 aa10.18□□□□□ -0.78
GGA3-212ENST00000582376 CCDC12Q8WUD4 166 aaPredicted RBP10.18□□□□□ -0.78
GGA3-212ENST00000582376 LRRC2Q9BYS8 371 aa10.18□□□□□ -0.78
GGA3-212ENST00000582376 TPSD1Q9BZJ3 242 aa10.18□□□□□ -0.78
GGA3-212ENST00000582376 THG1LQ9NWX6 298 aaKnown RBP10.18□□□□□ -0.78
GGA3-212ENST00000582376 DKK4Q9UBT3 224 aa10.18□□□□□ -0.78
GGA3-212ENST00000582376 MBD1Q9UIS9 605 aaPredicted RBP10.18□□□□□ -0.78
GGA3-212ENST00000582376 MAFFQ9ULX9 164 aa10.18□□□□□ -0.78
GGA3-212ENST00000582376 LAMA5O15230 3695 aa10.18□□□□□ -0.78
GGA3-212ENST00000582376 SHROOM3Q8TF72 1996 aa10.17□□□□□ -0.78
GGA3-212ENST00000582376 A0A087WV48 116 aa10.17□□□□□ -0.78
GGA3-212ENST00000582376 TNFRSF10BO14763 440 aa10.17□□□□□ -0.78
GGA3-212ENST00000582376 TBX3O15119 743 aa10.17□□□□□ -0.78
GGA3-212ENST00000582376 FTH1P19P0C7X4 201 aa10.17□□□□□ -0.78
GGA3-212ENST00000582376 DRD1P21728 446 aa10.17□□□□□ -0.78
GGA3-212ENST00000582376 DPP6P42658 865 aa10.17□□□□□ -0.78
GGA3-212ENST00000582376 ABCG1P45844 678 aa10.17□□□□□ -0.78
GGA3-212ENST00000582376 MCM2P49736 904 aa10.17□□□□□ -0.78
GGA3-212ENST00000582376 CLCNKBP51801 687 aa10.17□□□□□ -0.78
GGA3-212ENST00000582376 AMPD2Q01433 879 aa10.17□□□□□ -0.78
GGA3-212ENST00000582376 HDAC1Q13547 482 aaPredicted RBP10.17□□□□□ -0.78
GGA3-212ENST00000582376 TRIP6Q15654 476 aaKnown RBP10.17□□□□□ -0.78
GGA3-212ENST00000582376 PFKFB3Q16875 520 aaPredicted RBP10.17□□□□□ -0.78
GGA3-212ENST00000582376 SLC23A3Q6PIS1 610 aa10.17□□□□□ -0.78
GGA3-212ENST00000582376 APOA5Q6Q788 366 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms