RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 FBXL5Q9UKA1 691 aa13.57□□□□□ -0.24
SRSF1-204ENST00000581979 ABLIM1O14639 778 aa13.56□□□□□ -0.24
SRSF1-204ENST00000581979 PMM2O15305 246 aa13.56□□□□□ -0.24
SRSF1-204ENST00000581979 RB1P06400 928 aa13.56□□□□□ -0.24
SRSF1-204ENST00000581979 TNNI1P19237 187 aa13.56□□□□□ -0.24
SRSF1-204ENST00000581979 KCNQ1P51787 676 aa13.56□□□□□ -0.24
SRSF1-204ENST00000581979 CDK17Q00537 523 aa13.56□□□□□ -0.24
SRSF1-204ENST00000581979 AMHR2Q16671 573 aa13.56□□□□□ -0.24
SRSF1-204ENST00000581979 PTPROQ16827 1216 aa13.56□□□□□ -0.24
SRSF1-204ENST00000581979 DNTTIP2Q5QJE6 756 aaKnown RBP13.56□□□□□ -0.24
SRSF1-204ENST00000581979 IQCEQ6IPM2 695 aa13.56□□□□□ -0.24
SRSF1-204ENST00000581979 GJB7Q6PEY0 223 aa13.56□□□□□ -0.24
SRSF1-204ENST00000581979 CDR2LQ86X02 465 aaPredicted RBP13.56□□□□□ -0.24
SRSF1-204ENST00000581979 NPAS4Q8IUM7 802 aa13.56□□□□□ -0.24
SRSF1-204ENST00000581979 CPB2Q96IY4 423 aa13.56□□□□□ -0.24
SRSF1-204ENST00000581979 PPP1R13BQ96KQ4 1090 aa13.56□□□□□ -0.24
SRSF1-204ENST00000581979 UHRF1Q96T88 793 aaPredicted RBP13.56□□□□□ -0.24
SRSF1-204ENST00000581979 ADAMTS10Q9H324 1103 aa13.56□□□□□ -0.24
SRSF1-204ENST00000581979 CDHR5Q9HBB8 845 aa13.56□□□□□ -0.24
SRSF1-204ENST00000581979 PDE11AQ9HCR9 933 aa13.56□□□□□ -0.24
SRSF1-204ENST00000581979 PTPRHQ9HD43 1115 aa13.56□□□□□ -0.24
SRSF1-204ENST00000581979 ERVK-5Q9HDB9 667 aa13.56□□□□□ -0.24
SRSF1-204ENST00000581979 TOPORSQ9NS56 1045 aaPredicted RBP13.56□□□□□ -0.24
SRSF1-204ENST00000581979 PPP2R2CQ9Y2T4 447 aa13.56□□□□□ -0.24
SRSF1-204ENST00000581979 RWDD3Q9Y3V2 267 aa13.56□□□□□ -0.24
SRSF1-204ENST00000581979 DAAM1Q9Y4D1 1078 aa13.56□□□□□ -0.24
SRSF1-204ENST00000581979 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.56□□□□□ -0.24
SRSF1-204ENST00000581979 GPR32O75388 356 aa13.56□□□□□ -0.24
SRSF1-204ENST00000581979 CCDC175P0C221 793 aa13.56□□□□□ -0.24
SRSF1-204ENST00000581979 CYLC1P35663 651 aaPredicted RBP13.56□□□□□ -0.24
SRSF1-204ENST00000581979 BMPR1AP36894 532 aa13.56□□□□□ -0.24
SRSF1-204ENST00000581979 TNFSF9P41273 254 aa13.56□□□□□ -0.24
SRSF1-204ENST00000581979 CRYBB1P53674 252 aaPredicted RBP13.56□□□□□ -0.24
SRSF1-204ENST00000581979 GPM6BQ13491 265 aa13.56□□□□□ -0.24
SRSF1-204ENST00000581979 ASIC2Q16515 512 aa13.56□□□□□ -0.24
SRSF1-204ENST00000581979 EEF1DP3Q658K8 133 aa13.56□□□□□ -0.24
SRSF1-204ENST00000581979 GPIHBP1Q8IV16 184 aa13.56□□□□□ -0.24
SRSF1-204ENST00000581979 BRSK2Q8IWQ3 736 aa13.56□□□□□ -0.24
SRSF1-204ENST00000581979 THNSL1Q8IYQ7 743 aa13.56□□□□□ -0.24
SRSF1-204ENST00000581979 TMEM40Q8WWA1 233 aa13.56□□□□□ -0.24
SRSF1-204ENST00000581979 SYN2Q92777 582 aaPredicted RBP13.56□□□□□ -0.24
SRSF1-204ENST00000581979 OSMRQ99650 979 aa13.56□□□□□ -0.24
SRSF1-204ENST00000581979 CGRRF1Q99675 332 aa13.56□□□□□ -0.24
SRSF1-204ENST00000581979 CDT1Q9H211 546 aa13.56□□□□□ -0.24
SRSF1-204ENST00000581979 DEF6Q9H4E7 631 aa13.56□□□□□ -0.24
SRSF1-204ENST00000581979 NHEJ1Q9H9Q4 299 aaPredicted RBP13.56□□□□□ -0.24
SRSF1-204ENST00000581979 APEX2Q9UBZ4 518 aa13.56□□□□□ -0.24
SRSF1-204ENST00000581979 DNAJC12Q9UKB3 198 aa13.56□□□□□ -0.24
SRSF1-204ENST00000581979 BDP1A6H8Y1 2624 aa13.55□□□□□ -0.24
SRSF1-204ENST00000581979 FAM189A1O60320 539 aa13.55□□□□□ -0.24
SRSF1-204ENST00000581979 TSPAN1O60635 241 aa13.55□□□□□ -0.24
SRSF1-204ENST00000581979 ARF4P18085 180 aaPredicted RBP13.55□□□□□ -0.24
SRSF1-204ENST00000581979 FGFR4P22455 802 aa13.55□□□□□ -0.24
SRSF1-204ENST00000581979 RFX1P22670 979 aa13.55□□□□□ -0.24
SRSF1-204ENST00000581979 NCBP1Q09161 790 aaKnown RBP13.55□□□□□ -0.24
SRSF1-204ENST00000581979 BTG3Q14201 252 aaPredicted RBP13.55□□□□□ -0.24
SRSF1-204ENST00000581979 LMBRD2Q68DH5 695 aaPredicted RBP13.55□□□□□ -0.24
SRSF1-204ENST00000581979 SV2AQ7L0J3 742 aa13.55□□□□□ -0.24
SRSF1-204ENST00000581979 CMTR2Q8IYT2 770 aaKnown RBP13.55□□□□□ -0.24
SRSF1-204ENST00000581979 CCDC170Q8IYT3 715 aa13.55□□□□□ -0.24
SRSF1-204ENST00000581979 ZNF710Q8N1W2 664 aa13.55□□□□□ -0.24
SRSF1-204ENST00000581979 LMO3Q8TAP4 145 aa13.55□□□□□ -0.24
SRSF1-204ENST00000581979 FAM212AQ96EL1 285 aa13.55□□□□□ -0.24
SRSF1-204ENST00000581979 CCDC42Q96M95 316 aa13.55□□□□□ -0.24
SRSF1-204ENST00000581979 C16orf45Q96MC5 204 aaPredicted RBP13.55□□□□□ -0.24
SRSF1-204ENST00000581979 PDZD7Q9H5P4 517 aa13.55□□□□□ -0.24
SRSF1-204ENST00000581979 AJAP1Q9UKB5 411 aaPredicted RBP13.55□□□□□ -0.24
SRSF1-204ENST00000581979 CPSF3Q9UKF6 684 aaKnown RBP13.55□□□□□ -0.24
SRSF1-204ENST00000581979 MYO6Q9UM54 1294 aa13.55□□□□□ -0.24
SRSF1-204ENST00000581979 NOC2LQ9Y3T9 749 aaKnown RBP13.55□□□□□ -0.24
SRSF1-204ENST00000581979 ADGRG1Q9Y653 693 aa13.55□□□□□ -0.24
SRSF1-204ENST00000581979 EPN1Q9Y6I3 576 aaPredicted RBP13.55□□□□□ -0.24
SRSF1-204ENST00000581979 TCF20Q9UGU0 1960 aaKnown RBP13.55□□□□□ -0.24
SRSF1-204ENST00000581979 GPR182O15218 404 aa13.54□□□□□ -0.24
SRSF1-204ENST00000581979 RPS6KA5O75582 802 aa13.54□□□□□ -0.24
SRSF1-204ENST00000581979 NDUFA10O95299 355 aa13.54□□□□□ -0.24
SRSF1-204ENST00000581979 SERPING1P05155 500 aa13.54□□□□□ -0.24
SRSF1-204ENST00000581979 STAG3L1P0CL83 205 aa13.54□□□□□ -0.24
SRSF1-204ENST00000581979 MCF2P10911 925 aa13.54□□□□□ -0.24
SRSF1-204ENST00000581979 CTNNB1P35222 781 aa13.54□□□□□ -0.24
SRSF1-204ENST00000581979 WNT7BP56706 349 aa13.54□□□□□ -0.24
SRSF1-204ENST00000581979 OSTNP61366 133 aa13.54□□□□□ -0.24
SRSF1-204ENST00000581979 CLDN10P78369 228 aa13.54□□□□□ -0.24
SRSF1-204ENST00000581979 ARID5AQ03989 594 aa13.54□□□□□ -0.24
SRSF1-204ENST00000581979 NFX1Q12986 1120 aaKnown RBP13.54□□□□□ -0.24
SRSF1-204ENST00000581979 SURF1Q15526 300 aa13.54□□□□□ -0.24
SRSF1-204ENST00000581979 PTPN14Q15678 1187 aa13.54□□□□□ -0.24
SRSF1-204ENST00000581979 TIGD5Q53EQ6 642 aa13.54□□□□□ -0.24
SRSF1-204ENST00000581979 TDRD12Q587J7 1177 aaKnown RBP13.54□□□□□ -0.24
SRSF1-204ENST00000581979 CATSPER4Q7RTX7 472 aa13.54□□□□□ -0.24
SRSF1-204ENST00000581979 ACRBPQ8NEB7 543 aa13.54□□□□□ -0.24
SRSF1-204ENST00000581979 FBXL13Q8NEE6 735 aa13.54□□□□□ -0.24
SRSF1-204ENST00000581979 ADPGKQ9BRR6 497 aa13.54□□□□□ -0.24
SRSF1-204ENST00000581979 C11orf84Q9BUA3 381 aaPredicted RBP13.54□□□□□ -0.24
SRSF1-204ENST00000581979 PLVAPQ9BX97 442 aa13.54□□□□□ -0.24
SRSF1-204ENST00000581979 STK33Q9BYT3 514 aa13.54□□□□□ -0.24
SRSF1-204ENST00000581979 RAB20Q9NX57 234 aa13.54□□□□□ -0.24
SRSF1-204ENST00000581979 AIPL1Q9NZN9 384 aa13.54□□□□□ -0.24
SRSF1-204ENST00000581979 ARHGAP20Q9P2F6 1191 aa13.54□□□□□ -0.24
SRSF1-204ENST00000581979 ST3GAL5Q9UNP4 418 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms