RNA–Protein interactions for RNA: ENST00000581761.5

MKS1-211, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-211ENST00000581761 CEP290O15078 2479 aa15.69■□□□□ 0.1
MKS1-211ENST00000581761 FAM170AA1A519 330 aa15.68■□□□□ 0.1
MKS1-211ENST00000581761 TREHO43280 583 aa15.68■□□□□ 0.1
MKS1-211ENST00000581761 ASS1P00966 412 aaKnown RBP15.68■□□□□ 0.1
MKS1-211ENST00000581761 CST3P01034 146 aaPredicted RBP15.68■□□□□ 0.1
MKS1-211ENST00000581761 PRLRP16471 622 aa15.68■□□□□ 0.1
MKS1-211ENST00000581761 TCP1P17987 556 aaKnown RBP15.68■□□□□ 0.1
MKS1-211ENST00000581761 ACO1P21399 889 aaKnown RBP15.68■□□□□ 0.1
MKS1-211ENST00000581761 GJA9P57773 515 aa15.68■□□□□ 0.1
MKS1-211ENST00000581761 MYL6P60660 151 aa15.68■□□□□ 0.1
MKS1-211ENST00000581761 ZNF200P98182 395 aaPredicted RBP15.68■□□□□ 0.1
MKS1-211ENST00000581761 POU5F1Q01860 360 aaKnown RBP15.68■□□□□ 0.1
MKS1-211ENST00000581761 SGSM1Q2NKQ1 1148 aa15.68■□□□□ 0.1
MKS1-211ENST00000581761 DCAF4L1Q3SXM0 396 aa15.68■□□□□ 0.1
MKS1-211ENST00000581761 C7orf31Q8N865 590 aa15.68■□□□□ 0.1
MKS1-211ENST00000581761 DNAJB3Q8WWF6 145 aa15.68■□□□□ 0.1
MKS1-211ENST00000581761 RFFLQ8WZ73 363 aa15.68■□□□□ 0.1
MKS1-211ENST00000581761 ARHGEF26Q96DR7 871 aa15.68■□□□□ 0.1
MKS1-211ENST00000581761 OSBPL9Q96SU4 736 aa15.68■□□□□ 0.1
MKS1-211ENST00000581761 OSMRQ99650 979 aa15.68■□□□□ 0.1
MKS1-211ENST00000581761 MTG1Q9BT17 334 aaPredicted RBP15.68■□□□□ 0.1
MKS1-211ENST00000581761 TLR10Q9BXR5 811 aa15.68■□□□□ 0.1
MKS1-211ENST00000581761 UPF3AQ9H1J1 476 aaKnown RBP15.68■□□□□ 0.1
MKS1-211ENST00000581761 ISCUQ9H1K1 167 aa15.68■□□□□ 0.1
MKS1-211ENST00000581761 SPC25Q9HBM1 224 aa15.68■□□□□ 0.1
MKS1-211ENST00000581761 A0A1B0GUA9 196 aa15.67■□□□□ 0.1
MKS1-211ENST00000581761 NPTXRO95502 500 aa15.67■□□□□ 0.1
MKS1-211ENST00000581761 CALCAP01258 141 aa15.67■□□□□ 0.1
MKS1-211ENST00000581761 FTLP02792 175 aaPredicted RBP15.67■□□□□ 0.1
MKS1-211ENST00000581761 NFICP08651 508 aa15.67■□□□□ 0.1
MKS1-211ENST00000581761 GNAT1P11488 350 aa15.67■□□□□ 0.1
MKS1-211ENST00000581761 GZMAP12544 262 aa15.67■□□□□ 0.1
MKS1-211ENST00000581761 DARSP14868 501 aaKnown RBP15.67■□□□□ 0.1
MKS1-211ENST00000581761 ADAM17P78536 824 aa15.67■□□□□ 0.1
MKS1-211ENST00000581761 ZNF699Q32M78 642 aa15.67■□□□□ 0.1
MKS1-211ENST00000581761 MEI1Q5TIA1 1274 aa15.67■□□□□ 0.1
MKS1-211ENST00000581761 SCARA3Q6AZY7 606 aa15.67■□□□□ 0.1
MKS1-211ENST00000581761 JADE1Q6IE81 842 aa15.67■□□□□ 0.1
MKS1-211ENST00000581761 ZNF677Q86XU0 584 aa15.67■□□□□ 0.1
MKS1-211ENST00000581761 SYCE1Q8N0S2 351 aa15.67■□□□□ 0.1
MKS1-211ENST00000581761 RBBP8NLQ8NC74 664 aaPredicted RBP15.67■□□□□ 0.1
MKS1-211ENST00000581761 DIS3LQ8TF46 1054 aaKnown RBP15.67■□□□□ 0.1
MKS1-211ENST00000581761 DDX1Q92499 740 aaKnown RBP15.67■□□□□ 0.1
MKS1-211ENST00000581761 TAF4BQ92750 862 aa15.67■□□□□ 0.1
MKS1-211ENST00000581761 ACAP3Q96P50 834 aa15.67■□□□□ 0.1
MKS1-211ENST00000581761 NIF3L1Q9GZT8 377 aa15.67■□□□□ 0.1
MKS1-211ENST00000581761 THAP2Q9H0W7 228 aa15.67■□□□□ 0.1
MKS1-211ENST00000581761 CDHR5Q9HBB8 845 aa15.67■□□□□ 0.1
MKS1-211ENST00000581761 MROH7Q68CQ1 1323 aa15.67■□□□□ 0.1
MKS1-211ENST00000581761 MYH10P35580 1976 aa15.66■□□□□ 0.1
MKS1-211ENST00000581761 ANK1P16157 1881 aa15.66■□□□□ 0.1
MKS1-211ENST00000581761 ZNF185O15231 689 aa15.66■□□□□ 0.1
MKS1-211ENST00000581761 KRT19P08727 400 aa15.66■□□□□ 0.1
MKS1-211ENST00000581761 RARBP10826 455 aa15.66■□□□□ 0.1
MKS1-211ENST00000581761 GRM5P41594 1212 aa15.66■□□□□ 0.1
MKS1-211ENST00000581761 PCBP1Q15365 356 aaKnown RBP eCLIP15.66■□□□□ 0.1
MKS1-211ENST00000581761 CLEC16AQ2KHT3 1053 aa15.66■□□□□ 0.1
MKS1-211ENST00000581761 TMEM270Q6UE05 265 aa15.66■□□□□ 0.1
MKS1-211ENST00000581761 UBR7Q8N806 425 aa15.66■□□□□ 0.1
MKS1-211ENST00000581761 SLC35G2Q8TBE7 412 aa15.66■□□□□ 0.1
MKS1-211ENST00000581761 RABGGTAQ92696 567 aa15.66■□□□□ 0.1
MKS1-211ENST00000581761 MMS19Q96T76 1030 aa15.66■□□□□ 0.1
MKS1-211ENST00000581761 CCDC94Q9BW85 323 aaPredicted RBP15.66■□□□□ 0.1
MKS1-211ENST00000581761 PDCL3Q9H2J4 239 aa15.66■□□□□ 0.1
MKS1-211ENST00000581761 ASB7Q9H672 318 aa15.66■□□□□ 0.1
MKS1-211ENST00000581761 PCDHB2Q9Y5E7 798 aa15.66■□□□□ 0.1
MKS1-211ENST00000581761 MEFVO15553 781 aaPredicted RBP15.65■□□□□ 0.1
MKS1-211ENST00000581761 PGK1P00558 417 aa15.65■□□□□ 0.1
MKS1-211ENST00000581761 DNA2P51530 1060 aa15.65■□□□□ 0.1
MKS1-211ENST00000581761 YWHAEP62258 255 aaKnown RBP15.65■□□□□ 0.1
MKS1-211ENST00000581761 TUBB4BP68371 445 aa15.65■□□□□ 0.1
MKS1-211ENST00000581761 GPC5P78333 572 aa15.65■□□□□ 0.1
MKS1-211ENST00000581761 TMEM132DQ14C87 1099 aa15.65■□□□□ 0.1
MKS1-211ENST00000581761 RPS6KA1Q15418 735 aa15.65■□□□□ 0.1
MKS1-211ENST00000581761 SLC10A6Q3KNW5 377 aa15.65■□□□□ 0.1
MKS1-211ENST00000581761 GNASQ5JWF2 1037 aa15.65■□□□□ 0.1
MKS1-211ENST00000581761 ACAD10Q6JQN1 1059 aa15.65■□□□□ 0.1
MKS1-211ENST00000581761 NOTUMQ6P988 496 aa15.65■□□□□ 0.1
MKS1-211ENST00000581761 SLC27A1Q6PCB7 646 aa15.65■□□□□ 0.1
MKS1-211ENST00000581761 RHOT2Q8IXI1 618 aa15.65■□□□□ 0.1
MKS1-211ENST00000581761 GPR161Q8N6U8 529 aaKnown RBP15.65■□□□□ 0.1
MKS1-211ENST00000581761 LRRC57Q8N9N7 239 aa15.65■□□□□ 0.1
MKS1-211ENST00000581761 COG1Q8WTW3 980 aa15.65■□□□□ 0.1
MKS1-211ENST00000581761 DPF3Q92784 378 aa15.65■□□□□ 0.1
MKS1-211ENST00000581761 ZNF653Q96CK0 615 aa15.65■□□□□ 0.1
MKS1-211ENST00000581761 RPGRIP1Q96KN7 1286 aa15.65■□□□□ 0.1
MKS1-211ENST00000581761 PSMB7Q99436 277 aa15.65■□□□□ 0.1
MKS1-211ENST00000581761 CTTNBP2NLQ9P2B4 639 aa15.65■□□□□ 0.1
MKS1-211ENST00000581761 DNAH12Q6ZR08 3092 aa15.65■□□□□ 0.1
MKS1-211ENST00000581761 PDE2AO00408 941 aaPredicted RBP15.64■□□□□ 0.09
MKS1-211ENST00000581761 KIF4AO95239 1232 aa15.64■□□□□ 0.09
MKS1-211ENST00000581761 CAPN2P17655 700 aa15.64■□□□□ 0.09
MKS1-211ENST00000581761 AXLP30530 894 aa15.64■□□□□ 0.09
MKS1-211ENST00000581761 GNA15P30679 374 aa15.64■□□□□ 0.09
MKS1-211ENST00000581761 HOXA11P31270 313 aaPredicted RBP15.64■□□□□ 0.09
MKS1-211ENST00000581761 HOXC8P31273 242 aa15.64■□□□□ 0.09
MKS1-211ENST00000581761 SNX17Q15036 470 aa15.64■□□□□ 0.09
MKS1-211ENST00000581761 CCDC181Q5TID7 509 aa15.64■□□□□ 0.09
MKS1-211ENST00000581761 SCARA5Q6ZMJ2 495 aa15.64■□□□□ 0.09
MKS1-211ENST00000581761 PEX26Q7Z412 305 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms