RNA–Protein interactions for RNA: ENST00000581711.1

SMCHD1-207, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 4

Gene SMCHD1, Length 546 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-207ENST00000581711 AKR1B10O60218 316 aa6.01□□□□□ -1.45
SMCHD1-207ENST00000581711 ERN1O75460 977 aaKnown RBP6.01□□□□□ -1.45
SMCHD1-207ENST00000581711 RAP2AP10114 183 aa6.01□□□□□ -1.45
SMCHD1-207ENST00000581711 ATP5JP18859 108 aa6.01□□□□□ -1.45
SMCHD1-207ENST00000581711 MAPK10P53779 464 aa6.01□□□□□ -1.45
SMCHD1-207ENST00000581711 CCT2P78371 535 aaKnown RBP6.01□□□□□ -1.45
SMCHD1-207ENST00000581711 MTMR1Q13613 665 aa6.01□□□□□ -1.45
SMCHD1-207ENST00000581711 UBXN2BQ14CS0 331 aa6.01□□□□□ -1.45
SMCHD1-207ENST00000581711 SF3B3Q15393 1217 aaKnown RBP6.01□□□□□ -1.45
SMCHD1-207ENST00000581711 FSCN1Q16658 493 aaKnown RBP6.01□□□□□ -1.45
SMCHD1-207ENST00000581711 UGT8Q16880 541 aa6.01□□□□□ -1.45
SMCHD1-207ENST00000581711 TSTD2Q5T7W7 516 aa6.01□□□□□ -1.45
SMCHD1-207ENST00000581711 Q6ZVL8 140 aa6.01□□□□□ -1.45
SMCHD1-207ENST00000581711 PEG10Q86TG7 708 aaKnown RBP6.01□□□□□ -1.45
SMCHD1-207ENST00000581711 ZNF804BA4D1E1 1349 aa6□□□□□ -1.45
SMCHD1-207ENST00000581711 TRGV11A0A075B6L2 103 aa6□□□□□ -1.45
SMCHD1-207ENST00000581711 CCDC151A5D8V7 595 aa6□□□□□ -1.45
SMCHD1-207ENST00000581711 TP73O15350 636 aa6□□□□□ -1.45
SMCHD1-207ENST00000581711 ENPP1P22413 925 aa6□□□□□ -1.45
SMCHD1-207ENST00000581711 GPR3P46089 330 aa6□□□□□ -1.45
SMCHD1-207ENST00000581711 CDK17Q00537 523 aa6□□□□□ -1.45
SMCHD1-207ENST00000581711 SRSF2Q01130 221 aaKnown RBP6□□□□□ -1.45
SMCHD1-207ENST00000581711 CPEB4Q17RY0 729 aaKnown RBP eCLIP6□□□□□ -1.45
SMCHD1-207ENST00000581711 TOR2AQ5JU69 321 aa6□□□□□ -1.45
SMCHD1-207ENST00000581711 KAZNQ674X7 775 aa6□□□□□ -1.45
SMCHD1-207ENST00000581711 RIN2Q8WYP3 895 aaPredicted RBP6□□□□□ -1.45
SMCHD1-207ENST00000581711 FBXO34Q9NWN3 711 aa6□□□□□ -1.45
SMCHD1-207ENST00000581711 DPP7Q9UHL4 492 aa6□□□□□ -1.45
SMCHD1-207ENST00000581711 TRIM38O00635 465 aa5.99□□□□□ -1.45
SMCHD1-207ENST00000581711 BMP15O95972 392 aa5.99□□□□□ -1.45
SMCHD1-207ENST00000581711 IGKV2-30P06310 120 aa5.99□□□□□ -1.45
SMCHD1-207ENST00000581711 ECHS1P30084 290 aa5.99□□□□□ -1.45
SMCHD1-207ENST00000581711 IARSP41252 1262 aaKnown RBP5.99□□□□□ -1.45
SMCHD1-207ENST00000581711 SSBP2P81877 361 aaPredicted RBP5.99□□□□□ -1.45
SMCHD1-207ENST00000581711 EIF2B5Q13144 721 aaKnown RBP5.99□□□□□ -1.45
SMCHD1-207ENST00000581711 FCRLBQ6BAA4 426 aa5.99□□□□□ -1.45
SMCHD1-207ENST00000581711 C11orf87Q6NUJ2 197 aa5.99□□□□□ -1.45
SMCHD1-207ENST00000581711 ZNF529Q6P280 563 aa5.99□□□□□ -1.45
SMCHD1-207ENST00000581711 AMIGO2Q86SJ2 522 aa5.99□□□□□ -1.45
SMCHD1-207ENST00000581711 MTMR8Q96EF0 704 aa5.99□□□□□ -1.45
SMCHD1-207ENST00000581711 ACAP3Q96P50 834 aa5.99□□□□□ -1.45
SMCHD1-207ENST00000581711 MOCS1Q9NZB8 636 aa5.99□□□□□ -1.45
SMCHD1-207ENST00000581711 FLRT1Q9NZU1 646 aa5.99□□□□□ -1.45
SMCHD1-207ENST00000581711 HSFX1Q9UBD0 423 aa5.99□□□□□ -1.45
SMCHD1-207ENST00000581711 TRHDEQ9UKU6 1024 aa5.99□□□□□ -1.45
SMCHD1-207ENST00000581711 AOX1Q06278 1338 aa5.99□□□□□ -1.45
SMCHD1-207ENST00000581711 MPPED1O15442 326 aa5.98□□□□□ -1.45
SMCHD1-207ENST00000581711 MT-CO1P00395 513 aa5.98□□□□□ -1.45
SMCHD1-207ENST00000581711 CKBP12277 381 aa5.98□□□□□ -1.45
SMCHD1-207ENST00000581711 IL2RBP14784 551 aa5.98□□□□□ -1.45
SMCHD1-207ENST00000581711 PTGER1P34995 402 aa5.98□□□□□ -1.45
SMCHD1-207ENST00000581711 SREBF1P36956 1147 aa5.98□□□□□ -1.45
SMCHD1-207ENST00000581711 GRIA3P42263 894 aa5.98□□□□□ -1.45
SMCHD1-207ENST00000581711 ALDH1A3P47895 512 aa5.98□□□□□ -1.45
SMCHD1-207ENST00000581711 ITKQ08881 620 aa5.98□□□□□ -1.45
SMCHD1-207ENST00000581711 MTX3Q5HYI7 312 aa5.98□□□□□ -1.45
SMCHD1-207ENST00000581711 NECAB2Q7Z6G3 386 aa5.98□□□□□ -1.45
SMCHD1-207ENST00000581711 CBARPQ8N350 705 aaPredicted RBP5.98□□□□□ -1.45
SMCHD1-207ENST00000581711 VGLL2Q8N8G2 317 aa5.98□□□□□ -1.45
SMCHD1-207ENST00000581711 GPR156Q8NFN8 814 aa5.98□□□□□ -1.45
SMCHD1-207ENST00000581711 TSPEARQ8WU66 669 aa5.98□□□□□ -1.45
SMCHD1-207ENST00000581711 MARS2Q96GW9 593 aaKnown RBP5.98□□□□□ -1.45
SMCHD1-207ENST00000581711 FCRL4Q96PJ5 515 aa5.98□□□□□ -1.45
SMCHD1-207ENST00000581711 UHRF1Q96T88 793 aaPredicted RBP5.98□□□□□ -1.45
SMCHD1-207ENST00000581711 CCM2LQ9NUG4 571 aaPredicted RBP5.98□□□□□ -1.45
SMCHD1-207ENST00000581711 WNT6Q9Y6F9 365 aa5.98□□□□□ -1.45
SMCHD1-207ENST00000581711 WASHC2CQ9Y4E1 1318 aa5.98□□□□□ -1.45
SMCHD1-207ENST00000581711 ELFN1P0C7U0 828 aa5.97□□□□□ -1.45
SMCHD1-207ENST00000581711 OSMP13725 252 aa5.97□□□□□ -1.45
SMCHD1-207ENST00000581711 SOX10P56693 466 aa5.97□□□□□ -1.45
SMCHD1-207ENST00000581711 KLF1Q13351 362 aaPredicted RBP5.97□□□□□ -1.45
SMCHD1-207ENST00000581711 ABCB5Q2M3G0 1257 aa5.97□□□□□ -1.45
SMCHD1-207ENST00000581711 OTUD7BQ6GQQ9 843 aa5.97□□□□□ -1.45
SMCHD1-207ENST00000581711 VWA1Q6PCB0 445 aa5.97□□□□□ -1.45
SMCHD1-207ENST00000581711 KCNK18Q7Z418 384 aa5.97□□□□□ -1.45
SMCHD1-207ENST00000581711 ZCRB1Q8TBF4 217 aaKnown RBP5.97□□□□□ -1.45
SMCHD1-207ENST00000581711 STON2Q8WXE9 905 aa5.97□□□□□ -1.45
SMCHD1-207ENST00000581711 TFAP2BQ92481 460 aa5.97□□□□□ -1.45
SMCHD1-207ENST00000581711 SLC2A13Q96QE2 648 aa5.97□□□□□ -1.45
SMCHD1-207ENST00000581711 ORAI2Q96SN7 254 aa5.97□□□□□ -1.45
SMCHD1-207ENST00000581711 PUS7LQ9H0K6 701 aaKnown RBP5.97□□□□□ -1.45
SMCHD1-207ENST00000581711 DNAJC28Q9NX36 388 aa5.97□□□□□ -1.45
SMCHD1-207ENST00000581711 SLC23A1Q9UHI7 598 aa5.97□□□□□ -1.45
SMCHD1-207ENST00000581711 K7ESF4 209 aa5.96□□□□□ -1.46
SMCHD1-207ENST00000581711 GUCY1A2P33402 732 aa5.96□□□□□ -1.46
SMCHD1-207ENST00000581711 FAPQ12884 760 aa5.96□□□□□ -1.46
SMCHD1-207ENST00000581711 LLGL1Q15334 1064 aa5.96□□□□□ -1.46
SMCHD1-207ENST00000581711 ZNF626Q68DY1 528 aa5.96□□□□□ -1.46
SMCHD1-207ENST00000581711 CRELD2Q6UXH1 353 aaPredicted RBP5.96□□□□□ -1.46
SMCHD1-207ENST00000581711 PQLC1Q8N2U9 271 aa5.96□□□□□ -1.46
SMCHD1-207ENST00000581711 ZNF48Q96MX3 618 aaPredicted RBP5.96□□□□□ -1.46
SMCHD1-207ENST00000581711 MED15Q96RN5 788 aa5.96□□□□□ -1.46
SMCHD1-207ENST00000581711 PNKPQ96T60 521 aa5.96□□□□□ -1.46
SMCHD1-207ENST00000581711 SMAD5Q99717 465 aaKnown RBP5.96□□□□□ -1.46
SMCHD1-207ENST00000581711 NOP58Q9Y2X3 529 aaKnown RBP5.96□□□□□ -1.46
SMCHD1-207ENST00000581711 WASHC2AQ641Q2 1341 aa5.96□□□□□ -1.46
SMCHD1-207ENST00000581711 GABRDO14764 452 aa5.95□□□□□ -1.46
SMCHD1-207ENST00000581711 PRR35P0CG20 571 aa5.95□□□□□ -1.46
SMCHD1-207ENST00000581711 SRGNP10124 158 aa5.95□□□□□ -1.46
SMCHD1-207ENST00000581711 MYBL2P10244 700 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms