RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 ATXN8OSP0DMR3 200 aa15.26■□□□□ 0.03
CSNK1D-217ENST00000581241 TPI1P60174 286 aa15.26■□□□□ 0.03
CSNK1D-217ENST00000581241 PLOD1Q02809 727 aaPredicted RBP15.26■□□□□ 0.03
CSNK1D-217ENST00000581241 PDAP1Q13442 181 aaKnown RBP15.26■□□□□ 0.03
CSNK1D-217ENST00000581241 HAUS6Q7Z4H7 955 aa15.26■□□□□ 0.03
CSNK1D-217ENST00000581241 ELOA2Q8IYF1 753 aaPredicted RBP15.26■□□□□ 0.03
CSNK1D-217ENST00000581241 RFWD2Q8NHY2 731 aa15.26■□□□□ 0.03
CSNK1D-217ENST00000581241 MARCOQ9UEW3 520 aaPredicted RBP15.26■□□□□ 0.03
CSNK1D-217ENST00000581241 PCDHGB4Q9UN71 923 aa15.26■□□□□ 0.03
CSNK1D-217ENST00000581241 PREX2Q70Z35 1606 aa15.26■□□□□ 0.03
CSNK1D-217ENST00000581241 RAD17O75943 681 aa15.26■□□□□ 0.03
CSNK1D-217ENST00000581241 TMEM253P0C7T8 217 aa15.26■□□□□ 0.03
CSNK1D-217ENST00000581241 NQO1P15559 274 aaKnown RBP15.26■□□□□ 0.03
CSNK1D-217ENST00000581241 ERBB3P21860 1342 aa15.26■□□□□ 0.03
CSNK1D-217ENST00000581241 ANO4Q32M45 955 aa15.26■□□□□ 0.03
CSNK1D-217ENST00000581241 SYN2Q92777 582 aaPredicted RBP15.26■□□□□ 0.03
CSNK1D-217ENST00000581241 TASP1Q9H6P5 420 aa15.26■□□□□ 0.03
CSNK1D-217ENST00000581241 VCPKMTQ9H867 229 aa15.26■□□□□ 0.03
CSNK1D-217ENST00000581241 MINPP1Q9UNW1 487 aa15.26■□□□□ 0.03
CSNK1D-217ENST00000581241 QRICH2Q9H0J4 1663 aa15.26■□□□□ 0.03
CSNK1D-217ENST00000581241 GYPCP04921 128 aa15.25■□□□□ 0.03
CSNK1D-217ENST00000581241 YWHABP31946 246 aaKnown RBP15.25■□□□□ 0.03
CSNK1D-217ENST00000581241 KPNB1Q14974 876 aaKnown RBP15.25■□□□□ 0.03
CSNK1D-217ENST00000581241 SYCP2LQ5T4T6 812 aa15.25■□□□□ 0.03
CSNK1D-217ENST00000581241 BARGINQ6ZT62 677 aa15.25■□□□□ 0.03
CSNK1D-217ENST00000581241 RRM2BQ7LG56 351 aa15.25■□□□□ 0.03
CSNK1D-217ENST00000581241 PIGBQ92521 554 aa15.25■□□□□ 0.03
CSNK1D-217ENST00000581241 HPS3Q969F9 1004 aa15.25■□□□□ 0.03
CSNK1D-217ENST00000581241 AIPL1Q9NZN9 384 aa15.25■□□□□ 0.03
CSNK1D-217ENST00000581241 COPG1Q9Y678 874 aaKnown RBP15.25■□□□□ 0.03
CSNK1D-217ENST00000581241 ROBO2Q9HCK4 1378 aa15.25■□□□□ 0.03
CSNK1D-217ENST00000581241 TLR2O60603 784 aa15.25■□□□□ 0.03
CSNK1D-217ENST00000581241 PRDX5P30044 214 aa15.25■□□□□ 0.03
CSNK1D-217ENST00000581241 COPB2P35606 906 aa15.25■□□□□ 0.03
CSNK1D-217ENST00000581241 HSD17B3P37058 310 aa15.25■□□□□ 0.03
CSNK1D-217ENST00000581241 KRT35Q92764 455 aa15.25■□□□□ 0.03
CSNK1D-217ENST00000581241 ERP44Q9BS26 406 aa15.25■□□□□ 0.03
CSNK1D-217ENST00000581241 OLFML3Q9NRN5 406 aa15.25■□□□□ 0.03
CSNK1D-217ENST00000581241 WDR35Q9P2L0 1181 aa15.25■□□□□ 0.03
CSNK1D-217ENST00000581241 XPO1O14980 1071 aaKnown RBP15.25■□□□□ 0.03
CSNK1D-217ENST00000581241 GEMIN4P57678 1058 aaKnown RBP15.25■□□□□ 0.03
CSNK1D-217ENST00000581241 ZNF556Q9HAH1 456 aa15.25■□□□□ 0.03
CSNK1D-217ENST00000581241 SCN3BQ9NY72 215 aa15.25■□□□□ 0.03
CSNK1D-217ENST00000581241 MYO1GB0I1T2 1018 aa15.25■□□□□ 0.03
CSNK1D-217ENST00000581241 SEC24CP53992 1094 aa15.25■□□□□ 0.03
CSNK1D-217ENST00000581241 VCPP55072 806 aaKnown RBP15.25■□□□□ 0.03
CSNK1D-217ENST00000581241 URGCPQ8TCY9 931 aa15.25■□□□□ 0.03
CSNK1D-217ENST00000581241 GANCQ8TET4 914 aa15.25■□□□□ 0.03
CSNK1D-217ENST00000581241 DDI1Q8WTU0 396 aa15.25■□□□□ 0.03
CSNK1D-217ENST00000581241 C17orf80Q9BSJ5 609 aa15.25■□□□□ 0.03
CSNK1D-217ENST00000581241 ARHGEF38Q9NXL2 777 aa15.25■□□□□ 0.03
CSNK1D-217ENST00000581241 HOXC10Q9NYD6 342 aa15.25■□□□□ 0.03
CSNK1D-217ENST00000581241 SNRPAP09012 282 aaKnown RBP15.25■□□□□ 0.03
CSNK1D-217ENST00000581241 CTCFP49711 727 aaPredicted RBP15.25■□□□□ 0.03
CSNK1D-217ENST00000581241 KLK7P49862 253 aa15.25■□□□□ 0.03
CSNK1D-217ENST00000581241 DEPDC1Q5TB30 811 aa15.25■□□□□ 0.03
CSNK1D-217ENST00000581241 SNRNP48Q6IEG0 339 aaKnown RBP15.25■□□□□ 0.03
CSNK1D-217ENST00000581241 CLEC4GQ6UXB4 293 aa15.25■□□□□ 0.03
CSNK1D-217ENST00000581241 MCEEQ96PE7 176 aa15.25■□□□□ 0.03
CSNK1D-217ENST00000581241 ITM2BQ9Y287 266 aa15.25■□□□□ 0.03
CSNK1D-217ENST00000581241 SERPINB1P30740 379 aa15.24■□□□□ 0.03
CSNK1D-217ENST00000581241 COILP38432 576 aaPredicted RBP15.24■□□□□ 0.03
CSNK1D-217ENST00000581241 CCDC15Q0P6D6 951 aa15.24■□□□□ 0.03
CSNK1D-217ENST00000581241 USP10Q14694 798 aaKnown RBP15.24■□□□□ 0.03
CSNK1D-217ENST00000581241 AASDHQ4L235 1098 aaPredicted RBP15.24■□□□□ 0.03
CSNK1D-217ENST00000581241 ELMOD1Q8N336 334 aa15.24■□□□□ 0.03
CSNK1D-217ENST00000581241 SLC44A5Q8NCS7 719 aa15.24■□□□□ 0.03
CSNK1D-217ENST00000581241 CASKIN2Q8WXE0 1202 aa15.24■□□□□ 0.03
CSNK1D-217ENST00000581241 C9orf72Q96LT7 481 aa15.24■□□□□ 0.03
CSNK1D-217ENST00000581241 ADAM33Q9BZ11 813 aa15.24■□□□□ 0.03
CSNK1D-217ENST00000581241 C10orf88Q9H8K7 445 aa15.24■□□□□ 0.03
CSNK1D-217ENST00000581241 TARSP26639 723 aaKnown RBP15.24■□□□□ 0.03
CSNK1D-217ENST00000581241 CDK17Q00537 523 aa15.24■□□□□ 0.03
CSNK1D-217ENST00000581241 ZNF235Q14590 738 aa15.24■□□□□ 0.03
CSNK1D-217ENST00000581241 CRYMQ14894 314 aa15.24■□□□□ 0.03
CSNK1D-217ENST00000581241 CHI3L2Q15782 390 aa15.24■□□□□ 0.03
CSNK1D-217ENST00000581241 UGP2Q16851 508 aa15.24■□□□□ 0.03
CSNK1D-217ENST00000581241 E2F7Q96AV8 911 aa15.24■□□□□ 0.03
CSNK1D-217ENST00000581241 C18orf8Q96DM3 657 aa15.24■□□□□ 0.03
CSNK1D-217ENST00000581241 LBHD1Q9BQE6 289 aaPredicted RBP15.24■□□□□ 0.03
CSNK1D-217ENST00000581241 FHOD1Q9Y613 1164 aa15.24■□□□□ 0.03
CSNK1D-217ENST00000581241 C3orf70A6NLC5 250 aaPredicted RBP15.24■□□□□ 0.03
CSNK1D-217ENST00000581241 FOXO4P98177 505 aa15.24■□□□□ 0.03
CSNK1D-217ENST00000581241 MAGEB18Q96M61 343 aa15.24■□□□□ 0.03
CSNK1D-217ENST00000581241 RAB6BQ9NRW1 208 aa15.24■□□□□ 0.03
CSNK1D-217ENST00000581241 PAK5Q9P286 719 aa15.24■□□□□ 0.03
CSNK1D-217ENST00000581241 PNMA3Q9UL41 463 aa15.24■□□□□ 0.03
CSNK1D-217ENST00000581241 A2ML1A8K2U0 1454 aa15.24■□□□□ 0.03
CSNK1D-217ENST00000581241 ZNF560Q96MR9 790 aa15.24■□□□□ 0.03
CSNK1D-217ENST00000581241 CELF4Q9BZC1 486 aaKnown RBP15.24■□□□□ 0.03
CSNK1D-217ENST00000581241 CHMP2BQ9UQN3 213 aa15.24■□□□□ 0.03
CSNK1D-217ENST00000581241 CDY2AQ9Y6F7 541 aa15.24■□□□□ 0.03
CSNK1D-217ENST00000581241 CDY1Q9Y6F8 540 aa15.24■□□□□ 0.03
CSNK1D-217ENST00000581241 BCORL1Q5H9F3 1711 aa15.24■□□□□ 0.03
CSNK1D-217ENST00000581241 PRR23D1E9PI22 279 aaPredicted RBP15.23■□□□□ 0.03
CSNK1D-217ENST00000581241 APRTP07741 180 aa15.23■□□□□ 0.03
CSNK1D-217ENST00000581241 PRR23D2P0DMB1 279 aaPredicted RBP15.23■□□□□ 0.03
CSNK1D-217ENST00000581241 FBXW4P57775 412 aa15.23■□□□□ 0.03
CSNK1D-217ENST00000581241 TTC23LQ6PF05 361 aa15.23■□□□□ 0.03
CSNK1D-217ENST00000581241 C3orf62Q6ZUJ4 267 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms