RNA–Protein interactions for RNA: ENST00000580670.6

CDK5RAP3-219, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-219ENST00000580670 F8VZ95 297 aa14.88□□□□□ -0.03
CDK5RAP3-219ENST00000580670 PTGESO14684 152 aa14.88□□□□□ -0.03
CDK5RAP3-219ENST00000580670 XPOTO43592 962 aaKnown RBP14.88□□□□□ -0.03
CDK5RAP3-219ENST00000580670 CXCL10P02778 98 aa14.88□□□□□ -0.03
CDK5RAP3-219ENST00000580670 POLR2BP30876 1174 aaKnown RBP14.88□□□□□ -0.03
CDK5RAP3-219ENST00000580670 STAT1P42224 750 aa14.88□□□□□ -0.03
CDK5RAP3-219ENST00000580670 RBP5P82980 135 aa14.88□□□□□ -0.03
CDK5RAP3-219ENST00000580670 ARID5AQ03989 594 aa14.88□□□□□ -0.03
CDK5RAP3-219ENST00000580670 ASIC2Q16515 512 aa14.88□□□□□ -0.03
CDK5RAP3-219ENST00000580670 ZNF699Q32M78 642 aa14.88□□□□□ -0.03
CDK5RAP3-219ENST00000580670 DEFB128Q7Z7B8 93 aa14.88□□□□□ -0.03
CDK5RAP3-219ENST00000580670 UBE2Q1Q7Z7E8 422 aa14.88□□□□□ -0.03
CDK5RAP3-219ENST00000580670 TMTC1Q8IUR5 882 aa14.88□□□□□ -0.03
CDK5RAP3-219ENST00000580670 CXorf38Q8TB03 319 aa14.88□□□□□ -0.03
CDK5RAP3-219ENST00000580670 FAM81BQ96LP2 452 aa14.88□□□□□ -0.03
CDK5RAP3-219ENST00000580670 KREMEN1Q96MU8 473 aa14.88□□□□□ -0.03
CDK5RAP3-219ENST00000580670 GPR88Q9GZN0 384 aa14.88□□□□□ -0.03
CDK5RAP3-219ENST00000580670 RSAD1Q9HA92 442 aa14.88□□□□□ -0.03
CDK5RAP3-219ENST00000580670 AIPL1Q9NZN9 384 aa14.88□□□□□ -0.03
CDK5RAP3-219ENST00000580670 PYCARDQ9ULZ3 195 aa14.88□□□□□ -0.03
CDK5RAP3-219ENST00000580670 AGAP1Q9UPQ3 857 aa14.88□□□□□ -0.03
CDK5RAP3-219ENST00000580670 NUB1Q9Y5A7 615 aa14.88□□□□□ -0.03
CDK5RAP3-219ENST00000580670 PDCD11Q14690 1871 aaKnown RBP14.88□□□□□ -0.03
CDK5RAP3-219ENST00000580670 TET1Q8NFU7 2136 aa14.88□□□□□ -0.03
CDK5RAP3-219ENST00000580670 ARL5CA6NH57 179 aa14.88□□□□□ -0.03
CDK5RAP3-219ENST00000580670 SOWAHDA6NJG2 315 aa14.88□□□□□ -0.03
CDK5RAP3-219ENST00000580670 PNMA6AP0CW24 399 aaPredicted RBP14.88□□□□□ -0.03
CDK5RAP3-219ENST00000580670 SOX5P35711 763 aa14.88□□□□□ -0.03
CDK5RAP3-219ENST00000580670 GCNT1Q02742 428 aa14.88□□□□□ -0.03
CDK5RAP3-219ENST00000580670 FAM43BQ6ZT52 329 aaPredicted RBP14.88□□□□□ -0.03
CDK5RAP3-219ENST00000580670 ENOSF1Q7L5Y1 443 aa14.88□□□□□ -0.03
CDK5RAP3-219ENST00000580670 ZNF598Q86UK7 904 aaKnown RBP14.88□□□□□ -0.03
CDK5RAP3-219ENST00000580670 CHP1Q99653 195 aa14.88□□□□□ -0.03
CDK5RAP3-219ENST00000580670 XYLT2Q9H1B5 865 aa14.88□□□□□ -0.03
CDK5RAP3-219ENST00000580670 UBN1Q9NPG3 1134 aa14.88□□□□□ -0.03
CDK5RAP3-219ENST00000580670 TRIM43BA6NCK2 446 aa14.87□□□□□ -0.03
CDK5RAP3-219ENST00000580670 FOXN3O00409 490 aaPredicted RBP14.87□□□□□ -0.03
CDK5RAP3-219ENST00000580670 ENPP3O14638 875 aa14.87□□□□□ -0.03
CDK5RAP3-219ENST00000580670 ARHGAP6O43182 974 aa14.87□□□□□ -0.03
CDK5RAP3-219ENST00000580670 GFPT2O94808 682 aa14.87□□□□□ -0.03
CDK5RAP3-219ENST00000580670 EOMESO95936 686 aa14.87□□□□□ -0.03
CDK5RAP3-219ENST00000580670 ATICP31939 592 aa14.87□□□□□ -0.03
CDK5RAP3-219ENST00000580670 FAM189BP81408 668 aa14.87□□□□□ -0.03
CDK5RAP3-219ENST00000580670 CDK17Q00537 523 aa14.87□□□□□ -0.03
CDK5RAP3-219ENST00000580670 CUL2Q13617 745 aa14.87□□□□□ -0.03
CDK5RAP3-219ENST00000580670 TCTN1Q2MV58 587 aa14.87□□□□□ -0.03
CDK5RAP3-219ENST00000580670 GSTCDQ8NEC7 633 aa14.87□□□□□ -0.03
CDK5RAP3-219ENST00000580670 KIAA1524Q8TCG1 905 aa14.87□□□□□ -0.03
CDK5RAP3-219ENST00000580670 TAF4BQ92750 862 aa14.87□□□□□ -0.03
CDK5RAP3-219ENST00000580670 TRIM43Q96BQ3 446 aaPredicted RBP14.87□□□□□ -0.03
CDK5RAP3-219ENST00000580670 PPP1R10Q96QC0 940 aaKnown RBP14.87□□□□□ -0.03
CDK5RAP3-219ENST00000580670 ARID3AQ99856 593 aa14.87□□□□□ -0.03
CDK5RAP3-219ENST00000580670 NIF3L1Q9GZT8 377 aa14.87□□□□□ -0.03
CDK5RAP3-219ENST00000580670 KIAA0355O15063 1070 aa14.86□□□□□ -0.03
CDK5RAP3-219ENST00000580670 TIMP1P01033 207 aa14.86□□□□□ -0.03
CDK5RAP3-219ENST00000580670 THP07101 528 aa14.86□□□□□ -0.03
CDK5RAP3-219ENST00000580670 FERP16591 822 aa14.86□□□□□ -0.03
CDK5RAP3-219ENST00000580670 CYP3A5P20815 502 aa14.86□□□□□ -0.03
CDK5RAP3-219ENST00000580670 TBXAS1P24557 533 aaPredicted RBP14.86□□□□□ -0.03
CDK5RAP3-219ENST00000580670 RFC2P35250 354 aa14.86□□□□□ -0.03
CDK5RAP3-219ENST00000580670 USP8P40818 1118 aa14.86□□□□□ -0.03
CDK5RAP3-219ENST00000580670 SCNN1GP51170 649 aa14.86□□□□□ -0.03
CDK5RAP3-219ENST00000580670 AFF1P51825 1210 aaKnown RBP14.86□□□□□ -0.03
CDK5RAP3-219ENST00000580670 DNTTIP2Q5QJE6 756 aaKnown RBP14.86□□□□□ -0.03
CDK5RAP3-219ENST00000580670 FMNL3Q8IVF7 1028 aa14.86□□□□□ -0.03
CDK5RAP3-219ENST00000580670 SHC3Q92529 594 aa14.86□□□□□ -0.03
CDK5RAP3-219ENST00000580670 HPDLQ96IR7 371 aa14.86□□□□□ -0.03
CDK5RAP3-219ENST00000580670 SLC38A7Q9NVC3 462 aa14.86□□□□□ -0.03
CDK5RAP3-219ENST00000580670 MIOSQ9NXC5 875 aa14.86□□□□□ -0.03
CDK5RAP3-219ENST00000580670 SERPING1P05155 500 aa14.85□□□□□ -0.03
CDK5RAP3-219ENST00000580670 PLEKP08567 350 aaPredicted RBP14.85□□□□□ -0.03
CDK5RAP3-219ENST00000580670 RAG1P15918 1043 aa14.85□□□□□ -0.03
CDK5RAP3-219ENST00000580670 ITGB8P26012 769 aa14.85□□□□□ -0.03
CDK5RAP3-219ENST00000580670 SOX4Q06945 474 aaPredicted RBP14.85□□□□□ -0.03
CDK5RAP3-219ENST00000580670 KLHL30Q0D2K2 578 aa14.85□□□□□ -0.03
CDK5RAP3-219ENST00000580670 MYO1EQ12965 1108 aa14.85□□□□□ -0.03
CDK5RAP3-219ENST00000580670 MTF1Q14872 753 aa14.85□□□□□ -0.03
CDK5RAP3-219ENST00000580670 WDR72Q3MJ13 1102 aa14.85□□□□□ -0.03
CDK5RAP3-219ENST00000580670 TDRD12Q587J7 1177 aaKnown RBP14.85□□□□□ -0.03
CDK5RAP3-219ENST00000580670 ZNF667Q5HYK9 610 aa14.85□□□□□ -0.03
CDK5RAP3-219ENST00000580670 C9orf57Q5W0N0 161 aa14.85□□□□□ -0.03
CDK5RAP3-219ENST00000580670 RAD9BQ6WBX8 426 aa14.85□□□□□ -0.03
CDK5RAP3-219ENST00000580670 IRF2BP2Q7Z5L9 587 aa14.85□□□□□ -0.03
CDK5RAP3-219ENST00000580670 NHEJ1Q9H9Q4 299 aaPredicted RBP14.85□□□□□ -0.03
CDK5RAP3-219ENST00000580670 GOLGA2P5Q9HBQ8 144 aa14.85□□□□□ -0.03
CDK5RAP3-219ENST00000580670 ARHGAP20Q9P2F6 1191 aa14.85□□□□□ -0.03
CDK5RAP3-219ENST00000580670 NXF1Q9UBU9 619 aaKnown RBP14.85□□□□□ -0.03
CDK5RAP3-219ENST00000580670 INPP5FQ9Y2H2 1132 aa14.85□□□□□ -0.03
CDK5RAP3-219ENST00000580670 ANO9A1A5B4 782 aa14.85□□□□□ -0.03
CDK5RAP3-219ENST00000580670 PPEF2O14830 753 aa14.85□□□□□ -0.03
CDK5RAP3-219ENST00000580670 EVI5O60447 810 aa14.85□□□□□ -0.03
CDK5RAP3-219ENST00000580670 CCDC172P0C7W6 258 aa14.85□□□□□ -0.03
CDK5RAP3-219ENST00000580670 HGSNATQ68CP4 663 aa14.85□□□□□ -0.03
CDK5RAP3-219ENST00000580670 SCARA5Q6ZMJ2 495 aa14.85□□□□□ -0.03
CDK5RAP3-219ENST00000580670 VRTNQ9H8Y1 702 aa14.85□□□□□ -0.03
CDK5RAP3-219ENST00000580670 TMEM161AQ9NX61 479 aa14.85□□□□□ -0.03
CDK5RAP3-219ENST00000580670 POLIQ9UNA4 740 aa14.85□□□□□ -0.03
CDK5RAP3-219ENST00000580670 STAU1O95793 577 aaKnown RBP14.84□□□□□ -0.03
CDK5RAP3-219ENST00000580670 POMCP01189 267 aa14.84□□□□□ -0.03
CDK5RAP3-219ENST00000580670 KRT5P13647 590 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms