RNA–Protein interactions for RNA: ENST00000580533.1

SNORD3C-201, Transcript of small nucleolar RNA, C/D box 3C, humanhuman

BASIC

Gene SNORD3C, Length 581 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3C-201ENST00000580533 PPP3CAQ08209 521 aa12.65□□□□□ -0.38
SNORD3C-201ENST00000580533 ZNF699Q32M78 642 aa12.65□□□□□ -0.38
SNORD3C-201ENST00000580533 PRPF38BQ5VTL8 546 aaKnown RBP12.65□□□□□ -0.38
SNORD3C-201ENST00000580533 TDRD10Q5VZ19 366 aaKnown RBP12.65□□□□□ -0.38
SNORD3C-201ENST00000580533 C9orf57Q5W0N0 161 aa12.65□□□□□ -0.38
SNORD3C-201ENST00000580533 LMBRD2Q68DH5 695 aaPredicted RBP12.65□□□□□ -0.38
SNORD3C-201ENST00000580533 SARM1Q6SZW1 724 aa12.65□□□□□ -0.38
SNORD3C-201ENST00000580533 FMNL3Q8IVF7 1028 aa12.65□□□□□ -0.38
SNORD3C-201ENST00000580533 COLGALT2Q8IYK4 626 aa12.65□□□□□ -0.38
SNORD3C-201ENST00000580533 C1orf127Q8N9H9 656 aa12.65□□□□□ -0.38
SNORD3C-201ENST00000580533 PLEKHO2Q8TD55 490 aa12.65□□□□□ -0.38
SNORD3C-201ENST00000580533 C18orf25Q96B23 403 aaPredicted RBP12.65□□□□□ -0.38
SNORD3C-201ENST00000580533 TMEM169Q96HH4 297 aa12.65□□□□□ -0.38
SNORD3C-201ENST00000580533 PCMTD1Q96MG8 357 aaPredicted RBP12.65□□□□□ -0.38
SNORD3C-201ENST00000580533 PLVAPQ9BX97 442 aa12.65□□□□□ -0.38
SNORD3C-201ENST00000580533 HSD3B7Q9H2F3 369 aa12.65□□□□□ -0.38
SNORD3C-201ENST00000580533 RAB20Q9NX57 234 aa12.65□□□□□ -0.38
SNORD3C-201ENST00000580533 GCNT4Q9P109 453 aa12.65□□□□□ -0.38
SNORD3C-201ENST00000580533 DSEQ9UL01 958 aa12.65□□□□□ -0.38
SNORD3C-201ENST00000580533 AGAP1Q9UPQ3 857 aa12.65□□□□□ -0.38
SNORD3C-201ENST00000580533 COQ4Q9Y3A0 265 aa12.65□□□□□ -0.38
SNORD3C-201ENST00000580533 SF3B1O75533 1304 aaKnown RBP eCLIP12.64□□□□□ -0.392e-9■□□□□ 11.3
SNORD3C-201ENST00000580533 A0A1B0GTH6 734 aa12.64□□□□□ -0.39
SNORD3C-201ENST00000580533 ANO9A1A5B4 782 aa12.64□□□□□ -0.39
SNORD3C-201ENST00000580533 MEFVO15553 781 aaPredicted RBP12.64□□□□□ -0.39
SNORD3C-201ENST00000580533 TADA2AO75478 443 aa12.64□□□□□ -0.39
SNORD3C-201ENST00000580533 B3GAT3O94766 335 aa12.64□□□□□ -0.39
SNORD3C-201ENST00000580533 HLA-DRAP01903 254 aa12.64□□□□□ -0.39
SNORD3C-201ENST00000580533 RB1P06400 928 aa12.64□□□□□ -0.39
SNORD3C-201ENST00000580533 TPM1P09493 284 aa12.64□□□□□ -0.39
SNORD3C-201ENST00000580533 TBXAS1P24557 533 aaPredicted RBP12.64□□□□□ -0.39
SNORD3C-201ENST00000580533 CLCNKBP51801 687 aa12.64□□□□□ -0.39
SNORD3C-201ENST00000580533 BCAR1P56945 870 aa12.64□□□□□ -0.39
SNORD3C-201ENST00000580533 SMAD3P84022 425 aaKnown RBP12.64□□□□□ -0.39
SNORD3C-201ENST00000580533 NAB2Q15742 525 aa12.64□□□□□ -0.39
SNORD3C-201ENST00000580533 UPP1Q16831 310 aa12.64□□□□□ -0.39
SNORD3C-201ENST00000580533 ZNF667Q5HYK9 610 aa12.64□□□□□ -0.39
SNORD3C-201ENST00000580533 PDXDC1Q6P996 788 aa12.64□□□□□ -0.39
SNORD3C-201ENST00000580533 C15orf39Q6ZRI6 1047 aa12.64□□□□□ -0.39
SNORD3C-201ENST00000580533 OR5B17Q8NGF7 314 aa12.64□□□□□ -0.39
SNORD3C-201ENST00000580533 CLP1Q92989 425 aaKnown RBP12.64□□□□□ -0.39
SNORD3C-201ENST00000580533 HPDLQ96IR7 371 aa12.64□□□□□ -0.39
SNORD3C-201ENST00000580533 NT5C1BQ96P26 610 aa12.64□□□□□ -0.39
SNORD3C-201ENST00000580533 TRIM5Q9C035 493 aa12.64□□□□□ -0.39
SNORD3C-201ENST00000580533 NRDE2Q9H7Z3 1164 aa12.64□□□□□ -0.39
SNORD3C-201ENST00000580533 VRTNQ9H8Y1 702 aa12.64□□□□□ -0.39
SNORD3C-201ENST00000580533 MIOSQ9NXC5 875 aa12.64□□□□□ -0.39
SNORD3C-201ENST00000580533 SPG21Q9NZD8 308 aa12.64□□□□□ -0.39
SNORD3C-201ENST00000580533 PUF60Q9UHX1 559 aaKnown RBP12.64□□□□□ -0.39
SNORD3C-201ENST00000580533 PLAGL2Q9UPG8 496 aa12.64□□□□□ -0.39
SNORD3C-201ENST00000580533 MRPL42Q9Y6G3 142 aaKnown RBP12.64□□□□□ -0.39
SNORD3C-201ENST00000580533 PTPRJQ12913 1337 aa12.63□□□□□ -0.39
SNORD3C-201ENST00000580533 TDRD15B5MCY1 1934 aaKnown RBP12.63□□□□□ -0.39
SNORD3C-201ENST00000580533 A0A1W2PQC6 194 aa12.63□□□□□ -0.39
SNORD3C-201ENST00000580533 GOLGA6L6A8MZA4 724 aa12.63□□□□□ -0.39
SNORD3C-201ENST00000580533 PIRO00625 290 aa12.63□□□□□ -0.39
SNORD3C-201ENST00000580533 NRP1O14786 923 aa12.63□□□□□ -0.39
SNORD3C-201ENST00000580533 HUS1O60921 280 aa12.63□□□□□ -0.39
SNORD3C-201ENST00000580533 DDHD2O94830 711 aa12.63□□□□□ -0.39
SNORD3C-201ENST00000580533 GALTP07902 379 aa12.63□□□□□ -0.39
SNORD3C-201ENST00000580533 FAM163BP0C2L3 166 aa12.63□□□□□ -0.39
SNORD3C-201ENST00000580533 ODC1P11926 461 aa12.63□□□□□ -0.39
SNORD3C-201ENST00000580533 GATMP50440 423 aa12.63□□□□□ -0.39
SNORD3C-201ENST00000580533 WNT7BP56706 349 aa12.63□□□□□ -0.39
SNORD3C-201ENST00000580533 CBWD6Q4V339 395 aa12.63□□□□□ -0.39
SNORD3C-201ENST00000580533 CBWD3Q5JTY5 395 aa12.63□□□□□ -0.39
SNORD3C-201ENST00000580533 MIIPQ5JXC2 388 aa12.63□□□□□ -0.39
SNORD3C-201ENST00000580533 CBWD5Q5RIA9 395 aa12.63□□□□□ -0.39
SNORD3C-201ENST00000580533 C1orf220Q5T0J3 134 aa12.63□□□□□ -0.39
SNORD3C-201ENST00000580533 KCNT2Q6UVM3 1135 aa12.63□□□□□ -0.39
SNORD3C-201ENST00000580533 DSTYKQ6XUX3 929 aa12.63□□□□□ -0.39
SNORD3C-201ENST00000580533 ENOSF1Q7L5Y1 443 aa12.63□□□□□ -0.39
SNORD3C-201ENST00000580533 DPH6Q7L8W6 267 aa12.63□□□□□ -0.39
SNORD3C-201ENST00000580533 TMCO2Q7Z6W1 182 aaPredicted RBP12.63□□□□□ -0.39
SNORD3C-201ENST00000580533 ZSCAN30Q86W11 494 aa12.63□□□□□ -0.39
SNORD3C-201ENST00000580533 METTL23Q86XA0 190 aa12.63□□□□□ -0.39
SNORD3C-201ENST00000580533 ZNF280BQ86YH2 543 aa12.63□□□□□ -0.39
SNORD3C-201ENST00000580533 COLGALT1Q8NBJ5 622 aa12.63□□□□□ -0.39
SNORD3C-201ENST00000580533 EHBP1Q8NDI1 1231 aa12.63□□□□□ -0.39
SNORD3C-201ENST00000580533 APPL2Q8NEU8 664 aa12.63□□□□□ -0.39
SNORD3C-201ENST00000580533 SPATA18Q8TC71 538 aa12.63□□□□□ -0.39
SNORD3C-201ENST00000580533 ZNF516Q92618 1163 aa12.63□□□□□ -0.39
SNORD3C-201ENST00000580533 TGS1Q96RS0 853 aaKnown RBP12.63□□□□□ -0.39
SNORD3C-201ENST00000580533 C11orf84Q9BUA3 381 aaPredicted RBP12.63□□□□□ -0.39
SNORD3C-201ENST00000580533 CWH43Q9H720 699 aa12.63□□□□□ -0.39
SNORD3C-201ENST00000580533 SLC28A3Q9HAS3 691 aa12.63□□□□□ -0.39
SNORD3C-201ENST00000580533 ADAM28Q9UKQ2 775 aa12.63□□□□□ -0.39
SNORD3C-201ENST00000580533 SSX2IPQ9Y2D8 614 aa12.63□□□□□ -0.39
SNORD3C-201ENST00000580533 PRG3Q9Y2Y8 225 aaPredicted RBP12.63□□□□□ -0.39
SNORD3C-201ENST00000580533 ANK1P16157 1881 aa12.62□□□□□ -0.39
SNORD3C-201ENST00000580533 PDCD11Q14690 1871 aaKnown RBP12.62□□□□□ -0.39
SNORD3C-201ENST00000580533 FNDC1Q4ZHG4 1894 aaPredicted RBP12.62□□□□□ -0.39
SNORD3C-201ENST00000580533 KPNA7A9QM74 516 aa12.62□□□□□ -0.39
SNORD3C-201ENST00000580533 ASS1P00966 412 aaKnown RBP12.62□□□□□ -0.39
SNORD3C-201ENST00000580533 CTNNB1P35222 781 aa12.62□□□□□ -0.39
SNORD3C-201ENST00000580533 AFF1P51825 1210 aaKnown RBP12.62□□□□□ -0.39
SNORD3C-201ENST00000580533 LILRA4P59901 499 aa12.62□□□□□ -0.39
SNORD3C-201ENST00000580533 NOP14P78316 857 aaKnown RBP12.62□□□□□ -0.39
SNORD3C-201ENST00000580533 CREMQ03060 361 aa12.62□□□□□ -0.39
SNORD3C-201ENST00000580533 UBE3AQ05086 875 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms