RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 ZNF280DQ6N043 979 aa15.79■□□□□ 0.12
SMARCE1-216ENST00000580419 GET4Q7L5D6 327 aaPredicted RBP15.79■□□□□ 0.12
SMARCE1-216ENST00000580419 SIX5Q8N196 739 aa15.79■□□□□ 0.12
SMARCE1-216ENST00000580419 OSBPL6Q9BZF3 934 aa15.79■□□□□ 0.12
SMARCE1-216ENST00000580419 HAPLN2Q9GZV7 340 aa15.79■□□□□ 0.12
SMARCE1-216ENST00000580419 SEMA4AQ9H3S1 761 aa15.79■□□□□ 0.12
SMARCE1-216ENST00000580419 ASB7Q9H672 318 aa15.79■□□□□ 0.12
SMARCE1-216ENST00000580419 ANKFY1Q9P2R3 1169 aa15.79■□□□□ 0.12
SMARCE1-216ENST00000580419 FBXL5Q9UKA1 691 aa15.79■□□□□ 0.12
SMARCE1-216ENST00000580419 ANK1P16157 1881 aa15.79■□□□□ 0.12
SMARCE1-216ENST00000580419 WDR27A2RRH5 827 aa15.78■□□□□ 0.12
SMARCE1-216ENST00000580419 KRBA1A5PL33 1030 aa15.78■□□□□ 0.12
SMARCE1-216ENST00000580419 ZNF197O14709 1029 aa15.78■□□□□ 0.12
SMARCE1-216ENST00000580419 ECI2O75521 394 aa15.78■□□□□ 0.12
SMARCE1-216ENST00000580419 PTPN2P17706 415 aa15.78■□□□□ 0.12
SMARCE1-216ENST00000580419 TYMPP19971 482 aa15.78■□□□□ 0.12
SMARCE1-216ENST00000580419 ELF1P32519 619 aa15.78■□□□□ 0.12
SMARCE1-216ENST00000580419 EPHA5P54756 1037 aa15.78■□□□□ 0.12
SMARCE1-216ENST00000580419 PRKCQQ04759 706 aa15.78■□□□□ 0.12
SMARCE1-216ENST00000580419 PPP2R3AQ06190 1150 aa15.78■□□□□ 0.12
SMARCE1-216ENST00000580419 RAD51AP2Q09MP3 1159 aa15.78■□□□□ 0.12
SMARCE1-216ENST00000580419 SPATA1Q5VX52 437 aa15.78■□□□□ 0.12
SMARCE1-216ENST00000580419 NT5DC4Q86YG4 428 aa15.78■□□□□ 0.12
SMARCE1-216ENST00000580419 MYCT1Q8N699 235 aa15.78■□□□□ 0.12
SMARCE1-216ENST00000580419 LRRC15Q8TF66 581 aa15.78■□□□□ 0.12
SMARCE1-216ENST00000580419 DDX12PQ92771 950 aa15.78■□□□□ 0.12
SMARCE1-216ENST00000580419 DDX23Q9BUQ8 820 aaKnown RBP15.78■□□□□ 0.12
SMARCE1-216ENST00000580419 ZSCAN16Q9H4T2 348 aaPredicted RBP15.78■□□□□ 0.12
SMARCE1-216ENST00000580419 DNMT3BQ9UBC3 853 aaKnown RBP15.78■□□□□ 0.12
SMARCE1-216ENST00000580419 CCDC39Q9UFE4 941 aa15.78■□□□□ 0.12
SMARCE1-216ENST00000580419 CPSF3Q9UKF6 684 aaKnown RBP15.78■□□□□ 0.12
SMARCE1-216ENST00000580419 C2CD2Q9Y426 696 aa15.78■□□□□ 0.12
SMARCE1-216ENST00000580419 NUMBLQ9Y6R0 609 aa15.78■□□□□ 0.12
SMARCE1-216ENST00000580419 EP300Q09472 2414 aaPredicted RBP15.78■□□□□ 0.12
SMARCE1-216ENST00000580419 MIA3Q5JRA6 1907 aa15.77■□□□□ 0.12
SMARCE1-216ENST00000580419 OR6C75A6NL08 312 aa15.77■□□□□ 0.12
SMARCE1-216ENST00000580419 NARSO43776 548 aaKnown RBP15.77■□□□□ 0.12
SMARCE1-216ENST00000580419 TBCAO75347 108 aaKnown RBP15.77■□□□□ 0.12
SMARCE1-216ENST00000580419 LRG1P02750 347 aa15.77■□□□□ 0.12
SMARCE1-216ENST00000580419 CXCL8P10145 99 aa15.77■□□□□ 0.12
SMARCE1-216ENST00000580419 IGFBP6P24592 240 aaPredicted RBP15.77■□□□□ 0.12
SMARCE1-216ENST00000580419 MAGEA9P43362 315 aa15.77■□□□□ 0.12
SMARCE1-216ENST00000580419 ALCAMQ13740 583 aa15.77■□□□□ 0.12
SMARCE1-216ENST00000580419 POSTNQ15063 836 aa15.77■□□□□ 0.12
SMARCE1-216ENST00000580419 ENOX2Q16206 610 aaKnown RBP15.77■□□□□ 0.12
SMARCE1-216ENST00000580419 NPAS3Q8IXF0 933 aa15.77■□□□□ 0.12
SMARCE1-216ENST00000580419 KRI1Q8N9T8 703 aaKnown RBP15.77■□□□□ 0.12
SMARCE1-216ENST00000580419 DTWD2Q8NBA8 298 aa15.77■□□□□ 0.12
SMARCE1-216ENST00000580419 RSAD2Q8WXG1 361 aa15.77■□□□□ 0.12
SMARCE1-216ENST00000580419 ATOH1Q92858 354 aaPredicted RBP15.77■□□□□ 0.12
SMARCE1-216ENST00000580419 FGF14Q92915 247 aa15.77■□□□□ 0.12
SMARCE1-216ENST00000580419 C18orf25Q96B23 403 aaPredicted RBP15.77■□□□□ 0.12
SMARCE1-216ENST00000580419 BICD1Q96G01 975 aa15.77■□□□□ 0.12
SMARCE1-216ENST00000580419 PLIN2Q99541 437 aa15.77■□□□□ 0.12
SMARCE1-216ENST00000580419 STRA6Q9BX79 667 aa15.77■□□□□ 0.12
SMARCE1-216ENST00000580419 RPF1Q9H9Y2 349 aaKnown RBP15.77■□□□□ 0.12
SMARCE1-216ENST00000580419 ARHGEF3Q9NR81 526 aa15.77■□□□□ 0.12
SMARCE1-216ENST00000580419 NPHP3-ACAD11A0A0J9YXS1 232 aa15.76■□□□□ 0.11
SMARCE1-216ENST00000580419 K7ENM7 598 aa15.76■□□□□ 0.11
SMARCE1-216ENST00000580419 CCL16O15467 120 aa15.76■□□□□ 0.11
SMARCE1-216ENST00000580419 PPP1R37O75864 691 aa15.76■□□□□ 0.11
SMARCE1-216ENST00000580419 RHOP08100 348 aa15.76■□□□□ 0.11
SMARCE1-216ENST00000580419 GAP43P17677 238 aa15.76■□□□□ 0.11
SMARCE1-216ENST00000580419 SYT1P21579 422 aa15.76■□□□□ 0.11
SMARCE1-216ENST00000580419 MARCKSP29966 332 aaPredicted RBP15.76■□□□□ 0.11
SMARCE1-216ENST00000580419 MCM4P33991 863 aa15.76■□□□□ 0.11
SMARCE1-216ENST00000580419 TXLNAP40222 546 aa15.76■□□□□ 0.11
SMARCE1-216ENST00000580419 YWHAHQ04917 246 aaPredicted RBP15.76■□□□□ 0.11
SMARCE1-216ENST00000580419 MYBPC2Q14324 1141 aa15.76■□□□□ 0.11
SMARCE1-216ENST00000580419 MCM6Q14566 821 aa15.76■□□□□ 0.11
SMARCE1-216ENST00000580419 KARSQ15046 597 aaKnown RBP15.76■□□□□ 0.11
SMARCE1-216ENST00000580419 CTXN3Q4LDR2 81 aa15.76■□□□□ 0.11
SMARCE1-216ENST00000580419 POTEHQ6S545 545 aa15.76■□□□□ 0.11
SMARCE1-216ENST00000580419 ZNF720Q7Z2F6 126 aa15.76■□□□□ 0.11
SMARCE1-216ENST00000580419 FLCNQ8NFG4 579 aa15.76■□□□□ 0.11
SMARCE1-216ENST00000580419 GPR152Q8TDT2 470 aa15.76■□□□□ 0.11
SMARCE1-216ENST00000580419 ELSPBP1Q96BH3 223 aa15.76■□□□□ 0.11
SMARCE1-216ENST00000580419 GPR88Q9GZN0 384 aa15.76■□□□□ 0.11
SMARCE1-216ENST00000580419 TRPV5Q9NQA5 729 aa15.76■□□□□ 0.11
SMARCE1-216ENST00000580419 OLFML3Q9NRN5 406 aa15.76■□□□□ 0.11
SMARCE1-216ENST00000580419 FBXO2Q9UK22 296 aaPredicted RBP15.76■□□□□ 0.11
SMARCE1-216ENST00000580419 MRPS23Q9Y3D9 190 aaKnown RBP15.76■□□□□ 0.11
SMARCE1-216ENST00000580419 INSL5Q9Y5Q6 135 aa15.76■□□□□ 0.11
SMARCE1-216ENST00000580419 SCN1AP35498 2009 aa15.75■□□□□ 0.11
SMARCE1-216ENST00000580419 ANO9A1A5B4 782 aa15.75■□□□□ 0.11
SMARCE1-216ENST00000580419 I3L4J1 428 aa15.75■□□□□ 0.11
SMARCE1-216ENST00000580419 PRRG1O14668 218 aa15.75■□□□□ 0.11
SMARCE1-216ENST00000580419 CYP11A1P05108 521 aa15.75■□□□□ 0.11
SMARCE1-216ENST00000580419 KRT18P05783 430 aaKnown RBP15.75■□□□□ 0.11
SMARCE1-216ENST00000580419 CFHP08603 1231 aa15.75■□□□□ 0.11
SMARCE1-216ENST00000580419 GRIN1Q05586 938 aa15.75■□□□□ 0.11
SMARCE1-216ENST00000580419 SMARCB1Q12824 385 aa15.75■□□□□ 0.11
SMARCE1-216ENST00000580419 RESTQ13127 1097 aa15.75■□□□□ 0.11
SMARCE1-216ENST00000580419 GPR17Q13304 367 aa15.75■□□□□ 0.11
SMARCE1-216ENST00000580419 PLD1Q13393 1074 aa15.75■□□□□ 0.11
SMARCE1-216ENST00000580419 SLC39A14Q15043 492 aa15.75■□□□□ 0.11
SMARCE1-216ENST00000580419 PRSS36Q5K4E3 855 aa15.75■□□□□ 0.11
SMARCE1-216ENST00000580419 SLC39A4Q6P5W5 647 aa15.75■□□□□ 0.11
SMARCE1-216ENST00000580419 PARM1Q6UWI2 310 aa15.75■□□□□ 0.11
SMARCE1-216ENST00000580419 CCDC73Q6ZRK6 1079 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms