RNA–Protein interactions for RNA: ENST00000580357.1

IFT20-210, Transcript of intraflagellar transport 20, humanhuman

TSL 3

Gene IFT20, Length 752 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-210ENST00000580357 FBXL18Q96ME1 805 aa17.79■□□□□ 0.44
IFT20-210ENST00000580357 GSDMAQ96QA5 445 aa17.79■□□□□ 0.44
IFT20-210ENST00000580357 OXCT2Q9BYC2 517 aaPredicted RBP17.79■□□□□ 0.44
IFT20-210ENST00000580357 AGPAT3Q9NRZ7 376 aa17.79■□□□□ 0.44
IFT20-210ENST00000580357 RMND1Q9NWS8 449 aa17.79■□□□□ 0.44
IFT20-210ENST00000580357 HSPBP1Q9NZL4 362 aa17.79■□□□□ 0.44
IFT20-210ENST00000580357 BACE2Q9Y5Z0 518 aa17.79■□□□□ 0.44
IFT20-210ENST00000580357 ATG2AQ2TAZ0 1938 aa17.78■□□□□ 0.44
IFT20-210ENST00000580357 PDXKO00764 312 aa17.78■□□□□ 0.44
IFT20-210ENST00000580357 GLUD1P00367 558 aa17.78■□□□□ 0.44
IFT20-210ENST00000580357 MCM4P33991 863 aa17.78■□□□□ 0.44
IFT20-210ENST00000580357 MYBPC2Q14324 1141 aa17.78■□□□□ 0.44
IFT20-210ENST00000580357 SMAD2Q15796 467 aaKnown RBP17.78■□□□□ 0.44
IFT20-210ENST00000580357 PSMD5Q16401 504 aa17.78■□□□□ 0.44
IFT20-210ENST00000580357 RTP2Q5QGT7 225 aa17.78■□□□□ 0.44
IFT20-210ENST00000580357 RTL10Q7L3V2 364 aa17.78■□□□□ 0.44
IFT20-210ENST00000580357 XXYLT1Q8NBI6 393 aa17.78■□□□□ 0.44
IFT20-210ENST00000580357 C3orf58Q8NDZ4 430 aa17.78■□□□□ 0.44
IFT20-210ENST00000580357 S1PR5Q9H228 398 aa17.78■□□□□ 0.44
IFT20-210ENST00000580357 ADAM7Q9H2U9 754 aa17.78■□□□□ 0.44
IFT20-210ENST00000580357 DPP3Q9NY33 737 aa17.78■□□□□ 0.44
IFT20-210ENST00000580357 TUBGCP4Q9UGJ1 667 aa17.78■□□□□ 0.44
IFT20-210ENST00000580357 ANO9A1A5B4 782 aa17.77■□□□□ 0.44
IFT20-210ENST00000580357 GOLGA8IPA6NC78 632 aa17.77■□□□□ 0.44
IFT20-210ENST00000580357 SPDYE4A6NLX3 237 aa17.77■□□□□ 0.44
IFT20-210ENST00000580357 GOLGA8JA6NMD2 632 aa17.77■□□□□ 0.44
IFT20-210ENST00000580357 M0QZQ0 153 aa17.77■□□□□ 0.44
IFT20-210ENST00000580357 PIRO00625 290 aa17.77■□□□□ 0.44
IFT20-210ENST00000580357 EPCAMP16422 314 aa17.77■□□□□ 0.44
IFT20-210ENST00000580357 PNPLA4P41247 253 aa17.77■□□□□ 0.44
IFT20-210ENST00000580357 BRCC3P46736 316 aa17.77■□□□□ 0.44
IFT20-210ENST00000580357 CLUL1Q15846 466 aa17.77■□□□□ 0.44
IFT20-210ENST00000580357 LILRA6Q6PI73 481 aa17.77■□□□□ 0.44
IFT20-210ENST00000580357 SYCE2Q6PIF2 218 aa17.77■□□□□ 0.44
IFT20-210ENST00000580357 NOC3LQ8WTT2 800 aaKnown RBP17.77■□□□□ 0.44
IFT20-210ENST00000580357 B3GALT6Q96L58 329 aa17.77■□□□□ 0.44
IFT20-210ENST00000580357 UHRF1Q96T88 793 aaPredicted RBP17.77■□□□□ 0.44
IFT20-210ENST00000580357 POP1Q99575 1024 aaKnown RBP17.77■□□□□ 0.44
IFT20-210ENST00000580357 CLSTN3Q9BQT9 956 aa17.77■□□□□ 0.44
IFT20-210ENST00000580357 MTRRQ9UBK8 725 aa17.77■□□□□ 0.44
IFT20-210ENST00000580357 PCDHB8Q9UN66 801 aa17.77■□□□□ 0.44
IFT20-210ENST00000580357 R3HCC1Q9Y3T6 440 aaKnown RBP17.77■□□□□ 0.44
IFT20-210ENST00000580357 CLIC2O15247 247 aa17.76■□□□□ 0.43
IFT20-210ENST00000580357 CALUO43852 315 aaPredicted RBP17.76■□□□□ 0.43
IFT20-210ENST00000580357 KINO60870 393 aaKnown RBP17.76■□□□□ 0.43
IFT20-210ENST00000580357 PRPF40AO75400 957 aaKnown RBP17.76■□□□□ 0.43
IFT20-210ENST00000580357 NFICP08651 508 aa17.76■□□□□ 0.43
IFT20-210ENST00000580357 PRR29P0C7W0 189 aa17.76■□□□□ 0.43
IFT20-210ENST00000580357 TKTP29401 623 aaKnown RBP17.76■□□□□ 0.43
IFT20-210ENST00000580357 PLA2G5P39877 138 aa17.76■□□□□ 0.43
IFT20-210ENST00000580357 MTHFRP42898 656 aa17.76■□□□□ 0.43
IFT20-210ENST00000580357 AARSP49588 968 aaKnown RBP eCLIP17.76■□□□□ 0.43
IFT20-210ENST00000580357 LILRA4P59901 499 aa17.76■□□□□ 0.43
IFT20-210ENST00000580357 RAB33AQ14088 237 aa17.76■□□□□ 0.43
IFT20-210ENST00000580357 MRPL58Q14197 206 aaKnown RBP17.76■□□□□ 0.43
IFT20-210ENST00000580357 ATAT1Q5SQI0 421 aa17.76■□□□□ 0.43
IFT20-210ENST00000580357 C9orf57Q5W0N0 161 aa17.76■□□□□ 0.43
IFT20-210ENST00000580357 PRSS55Q6UWB4 352 aaPredicted RBP17.76■□□□□ 0.43
IFT20-210ENST00000580357 DSTYKQ6XUX3 929 aa17.76■□□□□ 0.43
IFT20-210ENST00000580357 PALB2Q86YC2 1186 aa17.76■□□□□ 0.43
IFT20-210ENST00000580357 SLC9A9Q8IVB4 645 aa17.76■□□□□ 0.43
IFT20-210ENST00000580357 KIAA0895Q8NCT3 520 aa17.76■□□□□ 0.43
IFT20-210ENST00000580357 CMASQ8NFW8 434 aaPredicted RBP17.76■□□□□ 0.43
IFT20-210ENST00000580357 ANKRD36BP1Q96IX9 119 aa17.76■□□□□ 0.43
IFT20-210ENST00000580357 RIPOR3Q96MK2 946 aa17.76■□□□□ 0.43
IFT20-210ENST00000580357 NECTIN4Q96NY8 510 aa17.76■□□□□ 0.43
IFT20-210ENST00000580357 SFXN1Q9H9B4 322 aa17.76■□□□□ 0.43
IFT20-210ENST00000580357 REV3LO60673 3130 aa17.75■□□□□ 0.43
IFT20-210ENST00000580357 TULP1O00294 542 aaPredicted RBP17.75■□□□□ 0.43
IFT20-210ENST00000580357 TGM5O43548 720 aa17.75■□□□□ 0.43
IFT20-210ENST00000580357 EXOC3O60645 756 aa17.75■□□□□ 0.43
IFT20-210ENST00000580357 UBE2HP62256 183 aa17.75■□□□□ 0.43
IFT20-210ENST00000580357 RBM10P98175 930 aaKnown RBP17.75■□□□□ 0.43
IFT20-210ENST00000580357 TFAMQ00059 246 aaKnown RBP17.75■□□□□ 0.43
IFT20-210ENST00000580357 SNRNP35Q16560 246 aaKnown RBP17.75■□□□□ 0.43
IFT20-210ENST00000580357 DUOXA2Q1HG44 320 aa17.75■□□□□ 0.43
IFT20-210ENST00000580357 UVSSAQ2YD98 709 aa17.75■□□□□ 0.43
IFT20-210ENST00000580357 C15orf39Q6ZRI6 1047 aa17.75■□□□□ 0.43
IFT20-210ENST00000580357 USP37Q86T82 979 aa17.75■□□□□ 0.43
IFT20-210ENST00000580357 ADHFE1Q8IWW8 467 aa17.75■□□□□ 0.43
IFT20-210ENST00000580357 GUF1Q8N442 669 aaKnown RBP17.75■□□□□ 0.43
IFT20-210ENST00000580357 SUSD6Q92537 303 aa17.75■□□□□ 0.43
IFT20-210ENST00000580357 FNBP1Q96RU3 617 aa17.75■□□□□ 0.43
IFT20-210ENST00000580357 RHOBTB2Q9BYZ6 727 aa17.75■□□□□ 0.43
IFT20-210ENST00000580357 KCTD10Q9H3F6 313 aa17.75■□□□□ 0.43
IFT20-210ENST00000580357 PDE11AQ9HCR9 933 aa17.75■□□□□ 0.43
IFT20-210ENST00000580357 ITGA11Q9UKX5 1188 aa17.75■□□□□ 0.43
IFT20-210ENST00000580357 DSEQ9UL01 958 aa17.75■□□□□ 0.43
IFT20-210ENST00000580357 MAFFQ9ULX9 164 aa17.75■□□□□ 0.43
IFT20-210ENST00000580357 TRAF3IP3Q9Y228 551 aa17.75■□□□□ 0.43
IFT20-210ENST00000580357 USP15Q9Y4E8 981 aaPredicted RBP17.75■□□□□ 0.43
IFT20-210ENST00000580357 BRWD1Q9NSI6 2320 aa17.74■□□□□ 0.43
IFT20-210ENST00000580357 I3L4J1 428 aa17.74■□□□□ 0.43
IFT20-210ENST00000580357 OAZ2O95190 189 aa17.74■□□□□ 0.43
IFT20-210ENST00000580357 TNNC2P02585 160 aa17.74■□□□□ 0.43
IFT20-210ENST00000580357 TMEM191BP0C7N4 346 aa17.74■□□□□ 0.43
IFT20-210ENST00000580357 IL9P15248 144 aa17.74■□□□□ 0.43
IFT20-210ENST00000580357 TYMPP19971 482 aa17.74■□□□□ 0.43
IFT20-210ENST00000580357 IGFBP6P24592 240 aaPredicted RBP17.74■□□□□ 0.43
IFT20-210ENST00000580357 OR1D2P34982 312 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms